Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,648,262 | C→T | 11.6% | intergenic (+47/‑76) | dbpA → / → yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,648,262 | 0 | C | T | 11.6% | 805.7 / 73.4 | 294 | intergenic (+47/‑76) | dbpA/yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
Reads supporting (aligned to +/- strand): ref base C (106/154); new base T (20/14); total (126/168) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.42e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 |
Only 100 of 294 total aligned reads displayed.
CAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTA > NC_002947/5648114‑5648410 | ggCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGt > 1:1373513/1‑150 (MQ=255) gCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTg > 2:4920976/1‑150 (MQ=255) gTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGaa < 1:3553325/150‑1 (MQ=255) gtgGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCa < 1:5942192/150‑1 (MQ=255) tgGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCAc < 1:6211782/150‑1 (MQ=255) gCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCa > 1:2408030/1‑150 (MQ=255) gggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTcgc < 2:2938619/150‑1 (MQ=255) gggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTcgc < 2:1871591/150‑1 (MQ=255) gggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTcgc < 2:1100065/150‑1 (MQ=255) ggCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTcgcg < 2:5241134/150‑1 (MQ=255) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCgg < 2:2478631/150‑1 (MQ=255) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCgg < 1:4840180/150‑1 (MQ=37) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCgg < 2:4703752/150‑1 (MQ=37) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCgg < 2:351729/150‑1 (MQ=25) gcgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCgg < 2:2019007/150‑1 (MQ=25) cgcTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCggg < 1:4386728/150‑1 (MQ=255) tGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGa > 1:4267014/1‑150 (MQ=255) gCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAAc < 1:488792/150‑1 (MQ=255) aaGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCAGTCGCGGGTGAACCCg > 1:1773246/1‑150 (MQ=255) aaGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCg < 1:3656230/150‑1 (MQ=21) cAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTc < 1:3874425/150‑1 (MQ=255) aGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTcc < 2:712478/150‑1 (MQ=255) gCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCca < 2:5004204/150‑1 (MQ=255) aTGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAg > 1:5351328/1‑150 (MQ=255) tgctgcGGCTGACCAGGGGCAATATCACGGGGCGCGCCCTGAAAGTCCGCATTAGCTAAAGCCAGTCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCTAATGCGGCATTGAATGCACCATCGCATTCGGGGGTGAACCCGCTCCCACAgg < 1:5481288/150‑1 (MQ=37) tGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAgg > 2:1454178/1‑150 (MQ=255) gCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGACTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAggg > 2:4200123/1‑150 (MQ=255) aGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGtt > 2:4329448/1‑150 (MQ=255) cGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCTGTGAATGCACCATCTCATTCGCGGGTGAACCCGCTCCCACAGGGTTCa < 2:3157931/150‑1 (MQ=255) gCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGc > 1:6399599/1‑150 (MQ=255) aaGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGa < 2:4480947/150‑1 (MQ=255) aaGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGa < 2:2830001/150‑1 (MQ=255) aaGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATACACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGa < 2:4594141/150‑1 (MQ=255) aGATCACGGGTCGCGCCCTGAAAGTCCGAATTATCTAACGCCAGGCAAAGCCCCCTGTCGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGACCCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGaa < 1:3162078/150‑1 (MQ=38) aGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCTTTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGaa < 1:6048042/150‑1 (MQ=255) aGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGaa < 2:3558498/150‑1 (MQ=255) gATCACGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAg < 1:2095409/150‑1 (MQ=255) aTCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAgg > 2:4627882/1‑150 (MQ=255) cAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAACGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAG‑ATTTGAAATGCTGaaccct < 2:5709811/150‑5 (MQ=37) aaGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTc < 1:4766539/150‑1 (MQ=255) aaGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTc > 1:6115656/1‑150 (MQ=255) gggTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCAt > 2:3484989/1‑150 (MQ=255) gggTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCAt < 2:2992607/150‑1 (MQ=255) gcgcCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGt < 1:1677990/150‑1 (MQ=255) gcgcCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGt < 2:4139087/150‑1 (MQ=255) cgcCCTGAAAGTCCGAATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTg < 1:6589448/150‑1 (MQ=255) gcCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTGCATACCGTGc > 1:6841625/1‑150 (MQ=255) cccTGAAAGTCCGCATTATCTAAAGCCAGGCAACGCCCCCTGTCGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCa < 1:3115832/150‑1 (MQ=255) tGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGTGCGGTTTTACCCGCGAATGCGGCTGTGAATGCACCATCGCATTCGGGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTc < 1:87308/150‑1 (MQ=255) tGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTc > 2:1471369/1‑150 (MQ=255) aaaGTCCGCATTATCTATAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCa < 2:5471103/150‑1 (MQ=255) aaaGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCa > 2:3368241/1‑150 (MQ=255) tCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGa < 2:2121681/150‑1 (MQ=255) ccGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGAc < 2:3996601/150‑1 (MQ=255) ttATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGat > 2:6468242/1‑150 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc < 2:5160578/150‑1 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc > 2:3643618/1‑150 (MQ=255) tAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATcc > 2:3073755/1‑150 (MQ=255) aaaGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCt > 1:727315/1‑150 (MQ=255) aaaGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCt > 1:2808596/1‑150 (MQ=255) acgCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGGGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCtt < 1:1347427/148‑1 (MQ=255) aGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTg < 1:955033/150‑1 (MQ=255) ccAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggc > 1:5538279/1‑150 (MQ=255) cAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcg > 1:4070341/1‑150 (MQ=255) aGGCAAAGCCCCCTGGAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTGCAGCATGTCACAT‑CTGAAGGTTCATACCGTGCACGCCCCCGACGGGATCATCCTGggcgc > 1:4912106/1‑150 (MQ=37) gCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccg > 1:5678163/1‑150 (MQ=255) gCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccg < 1:3368241/150‑1 (MQ=255) cAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccgg < 2:2538709/150‑1 (MQ=255) aaaGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggc > 1:1902233/1‑150 (MQ=255) aaaGCCCCCTGTAGGAGCGGGATTACCCGCGAAAGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggc > 1:4555448/1‑150 (MQ=255) tgaacccTGTGGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggcgc > 1:5127231/5‑150 (MQ=255) cccTGTGGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCgccgcc > 1:6824321/1‑150 (MQ=18) ggAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCTTCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGa < 2:2437680/150‑1 (MQ=255) gAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggcggcgccggcgccaa < 2:1662860/150‑6 (MQ=255) gAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCACTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAt > 1:3306482/1‑150 (MQ=255) gAGCGGGTTTACCCGCGAACGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggcggcgccggcgccaa < 2:5263254/150‑6 (MQ=255) gAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAt > 1:3041378/1‑150 (MQ=21) gCGGGTTTACCCGCGAAGGCGGCAGTGAATGCACCACCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAtgt < 1:1798479/150‑1 (MQ=255) gggTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgc < 2:860763/150‑1 (MQ=255) ggTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCCCTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgcg > 1:5576239/1‑150 (MQ=255) gTTTACCCGCGACTGCGGCTGTGAATGCACCATCGCATTCGGGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgcgc < 1:253863/150‑1 (MQ=255) gTTTACCCGCGAATGCGGCAGTGAATGCACCCTCGAATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgcgc < 1:341132/150‑1 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGTACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:5965272/1‑150 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:1536702/1‑150 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:3215183/1‑150 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCAACCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:1049109/1‑150 (MQ=255) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatc > 1:1191105/1‑109 (MQ=21) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:4183240/1‑150 (MQ=37) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTGAACCCGCTCCCACAGGGTACAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCGTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 2:4858353/1‑150 (MQ=25) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:4967528/1‑150 (MQ=25) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:1496056/1‑150 (MQ=25) cgcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTc > 2:1299630/1‑150 (MQ=255) cgcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTc > 2:2320237/1‑150 (MQ=255) cgcgAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTc > 2:5510452/1‑150 (MQ=25) gcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa > 1:1733280/1‑150 (MQ=255) aaTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTg < 2:6724126/150‑1 (MQ=255) aTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGc < 1:2151869/150‑1 (MQ=255) ggCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGt > 2:6082436/1‑150 (MQ=255) gCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTa < 1:2959844/150‑1 (MQ=255) gCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTa < 2:796739/150‑1 (MQ=255) | CAGGCGTTTGTGGCCGTGGAGCGGGCGCTGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTA > NC_002947/5648114‑5648410 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |