| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,648,290 | G→A | 5.9% | intergenic (+75/‑48) | dbpA → / → yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,648,290 | 0 | G | A | 5.9% | 904.1 / 29.7 | 290 | intergenic (+75/‑48) | dbpA/yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (140/129); new base A (14/3); total (156/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-01 | |||||||||||
Only 100 of 291 total aligned reads displayed.
TGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGCTGCTGCTCGACCAC > NC_002947/5648142‑5648439 | aaGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCAGTCGCGGGTGAACCCg > 1:1773246/1‑150 (MQ=255) aGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAACGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGc < 2:538415/150‑1 (MQ=25) aGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGc > 1:1367352/1‑150 (MQ=255) aGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTcc < 2:712478/150‑1 (MQ=255) gCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCTGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCca < 2:2375843/150‑1 (MQ=255) gCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCca < 2:5004204/150‑1 (MQ=255) ccATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCcac > 1:4837280/1‑150 (MQ=255) tGCAGCGGCTGAACAGCGGCAAGATCACGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAgg < 2:1715994/150‑1 (MQ=255) tGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAgg > 2:1454178/1‑150 (MQ=255) gCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTGGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAggg < 1:6021787/150‑1 (MQ=18) aGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGtt > 2:4329448/1‑150 (MQ=255) aGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCGGAAAGTCCGCATTATCTACAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTCAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGtt < 1:6137294/150‑1 (MQ=255) cGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCTGTGAATGCACCATCTCATTCGCGGGTGAACCCGCTCCCACAGGGTTCa < 2:3157931/150‑1 (MQ=255) gCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGc > 1:6399599/1‑150 (MQ=255) aGCGGCAAGATCCAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCaa > 2:3880186/1‑150 (MQ=255) gCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCaaa < 1:525348/150‑1 (MQ=255) aaGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGa < 2:2830001/150‑1 (MQ=255) aaGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGa < 2:4481099/150‑1 (MQ=255) aGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGaa < 2:3558498/150‑1 (MQ=255) aGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAG‑ATTTGAAATGCTGaa < 1:5526572/150‑1 (MQ=255) gATCACGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAg < 1:2095409/150‑1 (MQ=255) catgggTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGtt < 1:3896369/147‑1 (MQ=255) gcgcCCTGAACGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGt < 1:5541683/150‑1 (MQ=255) gcgcCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGt < 1:1677990/150‑1 (MQ=255) cTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACt > 2:4899432/1‑150 (MQ=255) tGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGACTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGGTCATACCGTGCACTc > 1:899766/1‑150 (MQ=255) tGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTc > 2:5559427/1‑150 (MQ=255) tGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTc > 2:1471369/1‑150 (MQ=255) tCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGa < 2:2121681/150‑1 (MQ=255) gCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGt > 2:732047/1‑150 (MQ=255) cATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTg > 1:3102892/1‑150 (MQ=255) aTTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGa < 2:5241787/150‑1 (MQ=255) aTTAACTAAAGCAAGGCAAAGCCCCCTGTCGTAGGGGGTTTACCGGCGATTGCGGCTGTGATTGCACCTTCGATTTGGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGa < 1:1436229/150‑1 (MQ=255) ttATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGat > 2:6468242/1‑150 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc > 2:3643618/1‑150 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc > 2:3437861/1‑150 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc < 2:4642207/150‑1 (MQ=255) cTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatcatc < 2:5160578/150‑1 (MQ=255) tAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTAAAAT‑CTGAAGGTTCATACCGAGCACTCCACCGACTTGATCATcc > 1:4247904/1‑150 (MQ=255) aaaGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCt > 1:2808596/1‑150 (MQ=255) aGCCAGGCAACGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCAGCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCCCCGACGTGATCATCCTTg < 2:4140842/150‑1 (MQ=255) gCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGCAGGTTCATCCCGTGCCCTCCACCGCCGTGATCCTCCGTgg > 2:4262992/1‑150 (MQ=38) gCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTgg > 1:447085/1‑150 (MQ=255) aGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgc > 1:3119234/1‑150 (MQ=255) aGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgc > 1:4912111/1‑150 (MQ=255) ggCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgcc < 1:4905023/150‑1 (MQ=255) gCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccg < 1:3368241/150‑1 (MQ=255) cAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccgg < 2:2538709/150‑1 (MQ=255) aaaGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggc > 1:1902233/1‑150 (MQ=255) cccTGTGGGAGCGGGTTCACCCGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCgccgcc > 1:6824321/1‑150 (MQ=18) cccTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCgccgcc > 2:2468902/1‑150 (MQ=255) aGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCAGACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTg < 2:4621526/150‑1 (MQ=255) ggAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCTTCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGa < 2:2437680/150‑1 (MQ=255) gAGCGGGTTTACCCGCGAACGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTggcgccggcggcgccggcgccaa < 2:5263254/150‑6 (MQ=255) aGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAtg > 1:712187/1‑150 (MQ=255) gggggTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGAtgt < 1:2538591/148‑1 (MQ=255) gggTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACTGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgc < 2:3045762/150‑1 (MQ=255) gggTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgc < 2:2967488/150‑1 (MQ=255) gggTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgc < 2:860763/150‑1 (MQ=255) gTTTACCCGCGAATGCGGCAGTGAATGCACCCTCGAATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgcgc < 1:341132/150‑1 (MQ=255) gTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTgcgc < 1:3647459/150‑1 (MQ=255) tACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCa < 2:5495703/150‑1 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:1536702/1‑150 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:3215172/1‑150 (MQ=255) ccGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCAACCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCt > 1:1049109/1‑150 (MQ=255) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatc < 2:1191105/109‑1 (MQ=21) ccGCGAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGatc > 1:1191105/1‑109 (MQ=21) cgcgAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCTACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTc > 1:5105836/1‑150 (MQ=25) gcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa > 1:1733280/1‑150 (MQ=255) gcgAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa < 1:4722850/150‑1 (MQ=255) gcgAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa > 1:609743/1‑150 (MQ=37) gcgAATGCGATGGTGCATTCACTGCCGCATTCGCGGGTAAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCa > 1:5396251/1‑150 (MQ=37) aaTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTg < 2:6724126/150‑1 (MQ=255) aTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGc > 1:5789416/1‑150 (MQ=255) aTGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGc < 1:2151869/150‑1 (MQ=255) tGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCCTGCACTCCACCGACGAGATCATCCTAGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGcc > 2:3505639/1‑150 (MQ=255) ggCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGt > 2:6082436/1‑150 (MQ=255) ggCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGt > 1:4164260/1‑150 (MQ=255) aGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGc > 1:4891361/1‑150 (MQ=255) gTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCg > 1:3653012/1‑150 (MQ=255) cACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGccgccg > 1:5669440/1‑150 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg > 1:6339614/1‑150 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg > 2:336328/1‑150 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg < 1:839881/150‑1 (MQ=255) aCCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCgg > 1:2378582/1‑150 (MQ=255) cATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGt < 2:2606586/150‑1 (MQ=255) cATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGt > 2:5938455/1‑150 (MQ=255) cATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGt > 1:1828299/1‑150 (MQ=255) aTCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtg > 2:1564274/1‑150 (MQ=255) tCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgc > 1:2958642/1‑150 (MQ=255) tgtgggagcgGGTTCACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgct > 2:1900382/8‑150 (MQ=255) ncATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgctg > 1:4073850/2‑150 (MQ=255) cATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgctgc > 1:4350648/1‑150 (MQ=255) aTTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgctgct > 1:3869568/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgctgctg > 1:3271741/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGtgctgctg > 1:64765/1‑150 (MQ=255) gcgGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGCTGCTGCTc > 1:988907/1‑150 (MQ=255) gcgGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGCTGCCGCTc > 1:4969961/1‑150 (MQ=255) gggTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGCTGCTGCTCGa < 2:4070341/150‑1 (MQ=255) gAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGCTGCTGCTCGACCAc > 2:110495/1‑150 (MQ=255) | TGGCCAAGCAGGCCATGCAGCGGCTGAACAGCGGCAAGATCAAGGGTCGCGCCCTGAAAGTCCGCATTATCTAAAGCCAGGCAAAGCCCCCTGTAGGAGCGGGTTTACCCGCGAATGCGGCAGTGAATGCACCATCGCATTCGCGGGTGAACCCGCTCCCACAGGGTTCAGCATTTCAAAT‑CTGAAGGTTCATACCGTGCACTCCACCGACGTGATCATCCTTGGCGCCGGCGCCGCCGGCCTGATGTGCGCCCAGCTCAGTGCCCGTAGCGGCCGCCGGGTGCTGCTGCTCGACCAC > NC_002947/5648142‑5648439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |