| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,686,417 | C→G | 5.2% | intergenic (‑134/+74) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,686,417 | 0 | C | G | 5.2% | 408.4 / 5.9 | 124 | intergenic (‑134/+74) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| Reads supporting (aligned to +/- strand): ref base C (61/56); new base G (2/5); total (63/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCAC > NC_002947/5686270‑5686565 | tCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCgg < 2:1807658/150‑1 (MQ=255)tCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCgg < 1:643738/150‑1 (MQ=255) ccGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgc < 2:2294050/150‑1 (MQ=255) cGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgct < 1:80417/150‑1 (MQ=255) cGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgct < 1:80437/150‑1 (MQ=255) tAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctgc < 1:454444/150‑1 (MQ=255) tAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGgctgc > 2:377697/1‑150 (MQ=255) ggtgcgtgacgcggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGCAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCtgctgc > 1:5903667‑M1/68‑150 (MQ=255) cATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGGCGCGCATGGGGCGCGAAGCGGCCCCAGGCTTTCAATGGCACGGCCAGCACCCCCGGGGCGGCGgcgc > 1:3394502/1‑150 (MQ=255) aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa < 1:3899763/150‑1 (MQ=255) aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCa < 1:4031416/150‑1 (MQ=255) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTGGCGAAAGGGGCGCGAAGCGGCCCCACGCGTTAATTGCCCCTGCATGAAACGCCGGGGGTGCTtcggcc > 2:3113108/1‑147 (MQ=38) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCCCTGCAAGACCCGCCGGGGCTGCTgcgccg > 2:4502727/1‑148 (MQ=255) tGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCCAAAGGGGCGCGAAGCGGCCCCACGCATTCATTTCCACAGCATGGACCGCCCGGGCTGGTGCGCAg > 2:2690942/1‑150 (MQ=38) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGc < 2:6682378/150‑1 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGc < 2:3584555/150‑1 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGc < 2:3934530/150‑1 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCATGTGTCGCGAAACGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCAATGCATGAAACGCCGGGGCTGCTGcgccgc > 2:5131201/1‑150 (MQ=255) acacAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGcccc < 1:2352879/149‑2 (MQ=255) ccccgccctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAt < 2:1146075/144‑1 (MQ=255) cacaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAt < 2:1146260/150‑1 (MQ=255) cggatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc > 1:1136482‑M1/57‑150 (MQ=255) caGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcg < 1:3891785/150‑1 (MQ=255) gatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcgc > 1:5217361‑M1/55‑150 (MQ=255) gatctgcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcgc > 2:3895182‑M1/55‑150 (MQ=255) aGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcgc < 2:716935/150‑1 (MQ=255) aGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATcgc > 2:3950339/1‑150 (MQ=255) aCCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTTCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAACGCGa > 2:458252/1‑150 (MQ=255) aCCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGa < 1:4458014/150‑1 (MQ=255) ctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGaca < 2:319394/150‑1 (MQ=255) tcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCGTTCATTGCCACAGCATGAACCGCCGGGGCGGCAGCGCAGCCCAAACGCGacac > 2:3095539/1‑150 (MQ=38) gcaacctgaccttggttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGacac > 2:1855923‑M1/50‑150 (MQ=255) ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACaa < 2:1418658/150‑1 (MQ=255) ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACaa < 2:5083577/150‑1 (MQ=255) tGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAg < 1:1802018/150‑1 (MQ=255) tGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAg < 1:5487424/150‑1 (MQ=255) gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAgg < 2:2253995/150‑1 (MQ=255) aGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGc < 1:6462152/150‑1 (MQ=255) gttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc < 1:3785095‑M1/94‑1 (MQ=255) gttaggatgtgaggcgcagggcctggtggtctggaGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATc > 2:3785095‑M1/36‑129 (MQ=255) ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcgc < 2:4747537/130‑1 (MQ=255) ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATcgc > 1:4747537/1‑130 (MQ=255) tgttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTTTGTCGCGAAAGGGGCGCGGAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCGGCTGCGCCGCCCGATCGCGGACCAAGGCCGCGCCCCCACCAGac > 2:5265632/1‑150 (MQ=255) tGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCATGTTTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACAGCATGAAACGCCCGGGCTGCTGCGCCGCCCCAAAGCCACACAAGGCCCCACCCACACCACAACACCACGc > 2:6069380/1‑150 (MQ=21) ttCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCCCGAAGCGGCCCCAGGCTTTCCTTGGCACTGCATTAAACGCCGGGGCTGCTGCGCCGCCCTATAGCCACACAAGGCCGCTCCCACTACAGAACACCAGGCCCAGCGccac > 2:456667/1‑148 (MQ=25) ttCGTTCTTTGTGGGAGCGGCCGTGTTTGGCGGAATGGGCGCGAAGCCGCCCCAGGCGTTCATTGCCCATGCAAGTACCGCCCGGGGGGGTTGGCAGCCCCATAGCCGCCCAAGGGCGCACCCACGCCAGAACCCCCGCCCCAGCGccgc > 2:1973644/1‑148 (MQ=255) tCGTTCTTTGTGGGAGCGGCCGTGTGTGGCGCAAAGGGCGCGAAGCCGCCCCACCCGTTCAATTCCACAGCAAGAACACCCCGGGCGGCGGCGCCGCCCCAAACCCCCACAACGCCCCGCCCACAACACACCAACACGCCCAGCGccgcc > 2:656979/1‑147 (MQ=255) ttCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACAGCATGAACCGCCCGGGCTGCTGCGCAGCCCCATCGCCACACAACGCCCCGACCCCAACACAACACCACGCCCAGCCCCGcacaa > 2:4958373/1‑149 (MQ=18) ttCTTTGTGGGAGCGGCCATGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCAATGCCACAGCATGGACCCCCGGGGCGGCTGCGCAGCCCAAACCCCACACAACGCCCCACCCCAACCAGAACACCACGCCCAGCCCCCcacaa > 2:4958345/1‑149 (MQ=16) tgtgGGAGCGGCCTTGTGTCGCGAAAGGGGCGCCAAGCGGCCCCAGGCTTTCATTGGCACAGCATTAACCGCCCGGGCTGCTGCGCCGCCCGATCGCGACACAAGGCCGCGCCCCCGCCAGACCCCCAGGCCCAGCGCCGCACAACCaaa > 2:6695627/1‑150 (MQ=21) GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAg < 1:1657262‑M1/150‑1 (MQ=255) CCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATAGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg < 1:2789308‑M1/150‑1 (MQ=255) TTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGtt < 2:5021863‑M1/150‑1 (MQ=255) TTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACAACCTAACCAAGGTCAGGtt < 1:1411602‑M1/150‑1 (MQ=255) GTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGc > 2:3796319‑M1/1‑150 (MQ=255) GTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGCCACAAGGCCGCTCCCACACCAGACCACCCGGCCCTGCGCCACACATCCGAACCAAGGTCACGTTGCAg < 1:5893398‑M1/150‑1 (MQ=255) TCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGGCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGa < 1:6232777‑M1/150‑1 (MQ=255) TCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGGCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGa < 1:911410‑M1/150‑1 (MQ=255) TCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGGCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGa < 1:911467‑M1/150‑1 (MQ=255) TCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGa < 2:1482814‑M1/150‑1 (MQ=255) TCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCGCACATCCTAACCAAGGTCAGGTTGCAGa < 1:5633820‑M1/150‑1 (MQ=255) GCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAACGCCGCTCCCCCACCACACCACCCGGCCCGGCGCCGCACCACCGAACCAAGGTCACGGTGCAGATc < 1:2360793‑M1/150‑1 (MQ=255) CGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATcc < 1:2208055‑M1/150‑1 (MQ=255) CGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATcc < 1:5674004‑M1/150‑1 (MQ=255) GAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcg < 2:3512736‑M1/150‑1 (MQ=255) GAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAAGGCCGCTCCCACACCAGACCACCAGGCCCAGCGCCTCACATCCTAAACAAGGTCACGTTGCAGATCcg < 1:4127569‑M1/150‑1 (MQ=255) ggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCAc > 2:5210962/1‑150 (MQ=255) ggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCAc > 2:5211011/1‑150 (MQ=255) ggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCAc > 2:6676937/1‑150 (MQ=255) gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 2:2190449/126‑1 (MQ=255) gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAAGGCCGCGCCCCCTCCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAAGGTCAGGGTGCAGATCCGCGTCACg > 1:4649622/1‑150 (MQ=255) cgcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGc > 2:5396059/1‑150 (MQ=255) gcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACAAGGCCGCGCCCACACCAGAACACCACGCCCAGCGCCGCACATCCAAAACAACGTCAGGTTTCAGATCCGCGTCACGCa > 1:22167/1‑150 (MQ=37) gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAcc > 2:4696810/1‑150 (MQ=255) gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACACCAGACCACCACGCCCTGCGCCTCACATCCAAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAcc > 1:5002857/1‑150 (MQ=255) gCCCCCGGCTTTCTTGGCCACTGCATGACCCGCGGGGGGTGCTGCGCAGCCCTAGCGCGACACACGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCtt < 2:4936531/150‑1 (MQ=255) gCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCtt > 2:5562277/1‑150 (MQ=255) gCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCtt < 1:3512736/150‑1 (MQ=255) gCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCtt > 2:6446844/1‑150 (MQ=255) cccTGGCTTTCTTGGCCACTGAATGAACCGCGGGGGCTGCTGCGCAGCCATATCGCTACACATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTc < 2:513558/150‑1 (MQ=255) ccAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc > 2:2826662/1‑150 (MQ=255) ccAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc > 2:562022/1‑150 (MQ=255) ccAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACCAGGCCGCTCCCACACCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCATTcc > 1:5483523/1‑150 (MQ=39) cAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCa > 2:4489235/1‑150 (MQ=255) ggCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAt < 1:2826662/150‑1 (MQ=255) tttCATTGCCACTGCATGAACCGCCGGGGCTTCTTCGCAGACCTATCGCGAAAAAAAGCCCCTCCCACACCACACCACCAAGCCCTGCGCCTCACAAACAAACAAAGGTAAGGTTTAAGATCCCCGTCAAGCAACACCCATTACAATgag > 1:3817262/1‑148 (MQ=255) tttCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCg > 2:2574037/1‑150 (MQ=255) tttCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTATCCAATGCg > 1:3817356/1‑150 (MQ=255) tttCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCGATCGCCACACAAGGCCGCTCCCACTCCCGACCACCAGGCCCAGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCg > 2:7377/1‑150 (MQ=255) aTTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCa > 2:6758345/1‑150 (MQ=255) ccACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTc > 2:3443354/1‑150 (MQ=255) aCTGCTTTAACCGCGGGGGCTGCTGCGCAGCCCTATCGCGACACACGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCg < 2:3635919/150‑1 (MQ=255) aCTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAAGCGACCAGGTCCg > 2:2596548/1‑150 (MQ=255) gCATGAACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACAAGGCCCCGCCCACTCCAGACCACCAGGCCCAGCGCCGCACAACCAAACCCAGGTCACGTTGCAGATCCGCGTCACGCACCAGCCATTCCAAAGCGACCAGGTCCGGTa > 1:6146741/1‑150 (MQ=255) aTGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAcc > 2:6469224/1‑150 (MQ=255) tGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCAGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCATTCCAATGCGACCAGGTCCGGTAccc > 2:518090/1‑150 (MQ=255) ccgccgGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCgcgc < 2:5674004/150‑1 (MQ=255) ccgGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 2:2222254/84‑1 (MQ=255) ccgGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg > 1:2222254/1‑84 (MQ=255) ccgGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCAc < 1:6602698/150‑1 (MQ=255) | TCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCAC > NC_002947/5686270‑5686565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |