| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,709,540 | G→A | 5.9% | intergenic (+60/+52) | PP_5006 → / ← PP_5007 | TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,709,540 | 0 | G | A | 5.9% | 955.8 / 30.6 | 307 | intergenic (+60/+52) | PP_5006/PP_5007 | TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2 |
| Reads supporting (aligned to +/- strand): ref base G (146/141); new base A (10/8); total (156/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.34e-01 | |||||||||||
Only 100 of 318 total aligned reads displayed.
TATCAGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAGCGCTGG > NC_002947/5709391‑5709689 | tCAGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGtt > 2:2378211/1‑150 (MQ=255) tCAGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGtt > 2:1600460/1‑150 (MQ=255) aGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGAGGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTg > 2:1547953/1‑150 (MQ=255) ggTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTgg > 2:6746276/1‑150 (MQ=255) ggTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTgg < 1:6863206/150‑1 (MQ=255) ggTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTgg > 2:6698362/1‑150 (MQ=255) gTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGgc < 2:148406/150‑1 (MQ=255) gTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGgc < 1:672489/150‑1 (MQ=255) gatgatGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGgcgc > 1:2234358/1‑150 (MQ=255) gatgCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGGTGTAGTGTTGCAGCCGACGCATTCGCGGGTAAAACCCCACCAACAAGGTTTGGCGCaac > 1:2205946/1‑148 (MQ=255) gatgCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCTCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATc < 1:6336017/150‑1 (MQ=255) gatgCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATc > 1:3863784/1‑150 (MQ=255) gatgCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATc > 2:3775260/1‑150 (MQ=255) gCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTg < 1:615124/150‑1 (MQ=255) tggtggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAGACCCGCTCCTACAAGGTTTGGCGCATCTTGTa < 2:6437069/150‑1 (MQ=255) tggtggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTa < 2:5911232/150‑1 (MQ=255) tggtggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTa < 1:1236868/150‑1 (MQ=255) tggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGa < 2:4867776/150‑1 (MQ=255) ggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAg > 2:4264687/1‑150 (MQ=255) gcgcCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGc < 1:2694549/150‑1 (MQ=255) gcgcCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGAGGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGGTTGGCGCCTCTTGTAGGAGc > 2:4034729/1‑150 (MQ=255) gccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTCCCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCgg < 1:4183093/150‑1 (MQ=255) gccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACCAGGTTTGGCGCATCTTGTAGGAGCgg > 2:6248461/1‑150 (MQ=255) gccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCgg < 2:4966218/150‑1 (MQ=255) gccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCgg < 1:5433900/150‑1 (MQ=255) gccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCgg < 1:4343090/150‑1 (MQ=255) gccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCgg < 1:909927/150‑1 (MQ=255) ccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGGGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCggg > 1:1721073/1‑150 (MQ=255) ccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCggg < 2:6805976/150‑1 (MQ=255) ccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCggg < 1:5752614/150‑1 (MQ=255) ccgcATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCggg < 1:5802227/150‑1 (MQ=37) tGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTAccc < 1:6620338/150‑1 (MQ=255) tGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCACCAACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTAccc > 1:3644617/1‑150 (MQ=255) caggcccaggccCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCcgc > 2:3459839/1‑150 (MQ=255) aggcccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCcgcg > 1:5120362/1‑150 (MQ=255) aggcccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCcgcg > 2:3084253/1‑150 (MQ=255) ggccgcggcccGGGCGGGGGGGGAGCTGCGGGCTGTGAAGTACCTGGTGGGGTTGGCCTGCTGGAGATGTCGGGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCGTACAAGGTTTGGCGCATCTTGTAGGTGGGGGTTTACCCGCga < 1:6634351/144‑1 (MQ=255) cccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCgaag > 2:3288961/1‑150 (MQ=255) ccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCgaaga > 1:3977440/1‑150 (MQ=255) caggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACACGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCgaagaa < 1:5644067/150‑1 (MQ=255) caggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCgaagaa > 1:4484379/1‑150 (MQ=255) caggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCgaagaa < 2:4365448/150‑1 (MQ=255) aggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGaagaag < 2:5571357/150‑1 (MQ=255) ccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGa < 2:6174428/150‑1 (MQ=255) gcagcTGGCAGTGAAGTACAGGGAGGGTTAGGCCTGATGTAGATGTAGTGTTGCAGCCTACGCATTCGCGGGAAAACCCTCACCTACAAGTTTTGCCTCAACTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTatcagatca < 1:158431/150‑1 (MQ=37) gcTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGATGCGCCAAACCTTGTAGGAGc < 2:1490881/109‑1 (MQ=21) cAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAAACCGCTACTAAAAGGTTTGGCGGATCTTGTAGGATCGGGTTTAACCGCGAAGAAGGCGAAGCGGTATCAGATAATGGTACCg > 2:2174048/1‑150 (MQ=255) gTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGt < 1:6197570/150‑1 (MQ=255) gTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGt < 2:3693812/150‑1 (MQ=255) tACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTatca > 2:6035363/1‑129 (MQ=255) tACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGt < 2:4590224/150‑1 (MQ=255) tACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAAACCGCACCAACAAGGTTTGGCGCCTCTTGTAGGAGCGGGTTTACCCGCGAATAAAGCGACGCGGTATCAGATCAGGGTACCCGTGCCAGt > 1:2305864/1‑150 (MQ=255) cTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCgg > 2:4141215/1‑150 (MQ=255) ggTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGGAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGAc > 2:1301556/1‑150 (MQ=255) gTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATAAGGGTACCGGTGCCAGTCGGTGCCGACg > 2:728676/1‑150 (MQ=255) gTAGGCCTGCGGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTGGTAGGTGCGGGTTTACCCGCGAAGAAGGCGACGCGGTAGCAGGTCAGGGTACCGGTGGCCGTCGGGGCCGACg > 2:1382433/1‑150 (MQ=38) ggCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCg < 2:3158517/150‑1 (MQ=255) ggCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCg < 2:1167032/150‑1 (MQ=255) ccTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGCCGGCGtg > 2:4897520/1‑150 (MQ=255) tgctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCCCACCTACAAGGTTTGGCGCATCTTGTAGGATCCGGTTTACCCCCGAAAAAGGCGACCCCGTATCAGAACAGGGTACAGGTGCCACACGGTGCCGACGGCGtgct > 1:4932399/1‑150 (MQ=255) gctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGtgctg < 2:2330287/150‑1 (MQ=255) ggAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAAACCCCACCTAAAATGTTTTGCGCATATTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCCGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGctgctg > 1:479327/1‑150 (MQ=38) gagaTGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCCCTCCTACAAGGTTTTGCGCATCTTGTGGGAGCGGGTTTAACCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGGTGCTgg > 1:1396521/1‑150 (MQ=255) aTGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCg < 1:6072924/150‑1 (MQ=255) tAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCgggg < 1:6826857/150‑1 (MQ=255) tAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCGTGTAGGTGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCgggg > 1:374319/1‑150 (MQ=255) tgtTGCAGCCGACGCATTCGCGGGTAAAACCCCGCCAACAAGGTTTGGCGCATCTTGTAGGAGCGGGGTTACCCGCGAAGAAGGCGCCGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGGGCTGCTGGCCGGGGTgg > 1:2411549/1‑150 (MQ=255) gtTGCAGCCGACGCATTCGCGGGTAACCCCGCTCCTACACGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggc < 1:5681754/150‑1 (MQ=255) ttGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACCAGGTTTGGCGCCTCGTGGAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggcg > 2:2781440/1‑150 (MQ=255) ttGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACACGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggcg < 1:1307726/150‑1 (MQ=255) gCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggcggc > 2:5139310/1‑150 (MQ=255) cAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCa < 1:3084253/150‑1 (MQ=255) cAGCCGACGCATTCGCGGGTAAACCCGCTACTACAAGGTTTGTCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTAACAGATCAGGGTACCGGTTCCACTCGGTGCCGACCGCGTGCTGCTGGCCGGGGTGGCGGCa > 1:1064128/1‑150 (MQ=39) aGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAg < 1:2529398/150‑1 (MQ=255) cGACGCATT‑GCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGc < 1:6310811/150‑1 (MQ=255) cGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCg < 2:3583386/150‑1 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTg > 1:6250766/1‑150 (MQ=255) cgGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCtgtg < 1:3053727/150‑1 (MQ=255) gggTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTgg > 1:3274994/1‑150 (MQ=255) aCCCGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGc < 1:3442143/87‑1 (MQ=17) cccGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGc > 1:759214/1‑150 (MQ=255) ccGCTCCTACTAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCa < 2:5330578/150‑1 (MQ=255) ccGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCa > 1:6513667/1‑150 (MQ=255) ccGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGct > 1:4212728/1‑149 (MQ=37) ccGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCa > 2:1721258/1‑150 (MQ=37) cGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGc < 1:5053099/84‑1 (MQ=17) cGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGc > 2:5053099/1‑84 (MQ=17) gCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAgg > 1:2789873/1‑150 (MQ=38) cTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTAGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGgc < 2:256499/150‑1 (MQ=255) tCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGgcg > 2:214024/1‑150 (MQ=255) tACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAg > 2:3994381/1‑150 (MQ=255) tACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAg > 1:6744439/1‑150 (MQ=255) tACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCCTGCTGCTGGCCGGGGTGGCGGCAGt > 1:40128/1‑121 (MQ=255) aCAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAgc > 2:1002985/1‑150 (MQ=255) cAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAgcg > 2:1959282/1‑150 (MQ=255) aaGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAgcgc > 1:4617284/1‑150 (MQ=255) aGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAGCGCt < 1:5015071/150‑1 (MQ=255) ggTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAGCGCTg < 1:4034991/150‑1 (MQ=255) gTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAGCGCTgg < 2:5509991/150‑1 (MQ=255) gTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAGCGCTgg < 1:597519/150‑1 (MQ=255) | TATCAGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAGGCGCAGCGCTGG > NC_002947/5709391‑5709689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |