| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,729,306 | T→G | 19.1% | intergenic (‑203/+91) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,729,306 | 0 | T | G | 19.1% | 449.8 / 15.9 | 211 | intergenic (‑203/+91) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base T (86/73); new base G (33/9); total (129/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 214 total aligned reads displayed.
ACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCG > NC_002947/5729158‑5729455 | aCTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTg < 1:2413185/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGTGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTgg < 2:2816951/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTgg < 1:3091507/150‑1 (MQ=255) tGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCACGGG‑t > 1:3267856/1‑150 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑Ta < 1:1809591/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑Ta < 2:3806345/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCAACAAAGGCAAGTGTATCCCGGG‑TAg > 2:2496121/1‑150 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGTCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGG‑GAACCCCACCGACAAGGGGCTGGGTGTCCCTGG‑GAggg > 1:4183898/1‑149 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGa < 2:6077260/150‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTGAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACACGGGCATGTGTATCCCTGG‑TAGGAGc < 1:5919499/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTACCGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCgg < 2:6612100/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCgg < 2:1461776/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCgg < 1:3155288/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTCAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCgg < 1:3971079/150‑1 (MQ=255) cgtcgtATCGGAGAGGGTTGGTTTCGCATGGCGGCCCTTGGACCTAGATCCGCAGGGGGACTTTGTTGGCCAAAATGAGCGGGACAGGCCAAAAAGCTTCGCGTGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGT‑TAGGAGCggg < 1:3203413/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCggg < 1:784090/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCggg < 2:1147414/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCggg < 2:1147383/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGCCAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCggg < 1:3203582/150‑1 (MQ=255) cgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTc < 2:2625696/150‑1 (MQ=255) gagaGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑TACCCCCGCCGACAAGGGGCTGGGTATCCCGGG‑GGGGAGCGGGTTCACCcgcg > 2:330128/1‑150 (MQ=255) gagggaggCTACCGCTGGGCGGCCCGGGGCCCTCGCCCCGCCGGGGGCGTTGGTGGGCCCCCTGGCGGGGGTTAGGCCAAAACGCTGCGCGGGGG‑ACCCCGCTCCTACACGGGCATGTGCATCCCTGG‑TAGGAGCGGGTTCACCCGCGaa < 2:4102535/150‑1 (MQ=255) ggATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑GACCCGCTCCAACAAGGGCCTGGGTATCCCGGG‑GTGGAGCGGGTTCACCCCCGAagag > 2:1456134/1‑150 (MQ=255) ggATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGG‑AACCCCCGCCAACAAGGGCATGGGTATCCCTGG‑GAGGAGCGGGGTCACCCGCGaacgg > 2:3442524/1‑147 (MQ=255) gCTAACGCTGGGGGGCCCGTGGCCCTAGAGCCGCCGGGGGACTTTGTTGGCCAAACTGCGGGGGTTAGCCCAAAACGCTGCGGGGGTG‑AACCCGCGCCTACCTGGGATACACTGCCCCGTG‑TTGGAGGGGGTTCACCCGCGAagcttttt < 2:3145318/150‑7 (MQ=12) gCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑TAACCCCTCCTACAAGGGCATGTGTATCCCGGG‑TAGGAGCGGGTTCAACCGCGAAGAGGccc > 2:1228444/1‑150 (MQ=255) gCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGG‑TACCCGCGCCAACAAGGGCATGTGTATACCGGG‑GAGGAGGGGGGTGACCCCCCCAGAGGccc > 1:6010920/1‑150 (MQ=255) taccGCAGGGGGGCCGGTGGCCCTAGAGCCGCTGGGGTATTTTTTTGGCAAATATGTGGGGTTTTGGCAAAAAAGGTTGGGGGGTG‑ACCCGGCTCCTACACGGGATTGTGTATCCCTGT‑TTGGTGGGGTTTCACCCGCGAAGAGGCCCgg < 2:4603764/147‑1 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑GACCCCCGCCACCAAGGGGCAGTGGTTCCCGGG‑GTGGGGCGGGGTGACCCGCGGACGGGCCCgg > 1:6061234/1‑150 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCgg > 2:5848628/1‑150 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑GAGGAGCGGGTTCACCCGCGAAGAGGCCCgg > 2:5981646/1‑150 (MQ=255) aaCGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑GACCCGCTCCTACAAGGGCCTGTGTATCCCGGG‑GTGGAGCGGGGTCACCCGCGCCGGGGCCCGGt > 2:3109179/1‑150 (MQ=255) aCGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCCTGTGTATCCCTGG‑TAGGAGCGGGGTCACCCGCGAAGAGGCCCGGTc > 2:6153759/1‑150 (MQ=255) gcggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGcc > 2:6852920/1‑150 (MQ=255) gACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGG‑AACCCGCTCCTACCAGGGCATGTGTATCCCCGG‑TAGGCGCGGGGTCACCCGCGAAGAGGCCCGGGCCTGCGCCCCGGTGGGCg > 2:4956135/1‑150 (MQ=255) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTAACCCCGCCAAAAAAGGGCA‑GTGTATACCAGG‑GTGGAGCCGGGTGACCCCCCAAAAGGCCCCCGCAAGCCCCCCCGAGGGCgggg > 1:4872371/1‑149 (MQ=255) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑TAACCCCCCCAAAAAAGGCATGTGTATACCGGG‑TAGGAGCGGGGTCACCCCCCCCGAGGGCCCGGCAAGCGCCCCCGACGGCgggg > 1:6538807/1‑149 (MQ=255) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AAACCGCTCCGACAAGGGCAGGGGGATCCCGGG‑GAGGCGCGGGGTCACCCGCGGAGCGGCCCGGGCATGCGCCCCGGAGGGCgggg > 2:5764658/1‑149 (MQ=255) gagCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCGCCAACAAGGGGAAGTGTATCCCAGG‑TAGGGGCGGGTTCACCCCCGAAGAGGCCCGGGCATGCGCCCCGTAGGGCGGGGTCa > 2:904120/1‑150 (MQ=255) ccGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCGGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGGAGGGCGGGTTCATCg > 2:6861051/1‑150 (MQ=255) gCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCAAAAAGGGCCTGTGTATCCCGGG‑TAGGAGCGGGGTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGGAGGGCGGGTTCATCggg > 2:5226954/1‑150 (MQ=255) gCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AAACCGCTCCTACAAGGGCATGTGTATCCCGGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCggg > 2:1071872/1‑150 (MQ=255) gagtttGTGGGCCAAAATGCGGGGGTTAGGCCAAAACGCTGCGGGGGTG‑ACCCCGCTCCTACACGGCCTTGTGTATCCCGGG‑TAGGAGGTGTTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGa < 2:1283006/147‑1 (MQ=255) tttGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTACAAAAAGGGCATCTGTAAACCTGG‑TATGAGCGGGTTCACCCCCGAAGAGGCCCCGTCATTCCCCCCCGTGGGCGGGTTCATACGGGCGCCGAAcc > 2:2091986/1‑150 (MQ=255) ttgttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑TAACCCCAACGACAAGGGCAAGTGTAAACCCGG‑GAGGTGCGGGGTCAACCCCGCAGAGGCCCCGTCCAGCGCCCCCGAGGGCGGGGTCATCGGGGCGCCgccccc > 1:4399037/1‑145 (MQ=255) gttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTACTACAATGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCAGGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgcc > 2:5659471/1‑150 (MQ=255) tgggCCAAAATGCGGGGGTTAGGCCAAAAAGCTTCGCGGGTC‑ACCCCGCCCCAACCCGGGCTTGTTTCTCCCTGG‑TCGGCGCGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgccg < 2:1686295/148‑1 (MQ=255) gCCAAAATGAGGGGGTTTGGCCAAAAAGCTTCGCGGGTG‑AACCCCCACCTACAAGGGCATGTGTATCCCGGG‑TAGGAGCGGGTTCACCCCCGCAGAGGCCCGGTCATGCGCCCCGGAGGGCGGGGTCATCGGGGCGCCCAAAcgccgccc > 2:2695568/1‑148 (MQ=255) cAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCCCTCCAAAAATGGCCAGTGTAGGCCGGG‑TAGGAGCGGGTTCACCCGCGCACAGGCCCCGTCATGCGCCCCCGAGGGCGGGTTAATCGGGGCGCCGAACCGCCGCGCAc > 2:4013127/1‑150 (MQ=255) gTTAGGCAAAAAAGCTTCGGGGGTG‑AACCCTCTCATACAAGGGCATGTGTATCCCTGT‑TAGGAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCaa < 2:2946104/150‑1 (MQ=255) tAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAgc < 2:5551690/150‑1 (MQ=255) cAAAAAGCTTCGCGGGTG‑TACACCCACCAACAAGGGCATGTGTAAACCTGG‑TAGGAGCGGGTTCACCCCCGAATATGCCCGGTCAAGCGCCCCCTAGGGCGGGTTAAACTGGGCGCCCAAACGCCCCGAAAAGACCCCATCAAACGCcga > 2:1660299/1‑150 (MQ=255) cAAAAAGCTTCGCGGGTG‑AACCCGCGCCTACAAGGGCCTGGGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCCAACAGACCCGATCAAGCGCcga > 2:6753958/1‑150 (MQ=255) aaaaaGCTTCGCGGGTG‑AACCCGCTCCAACAAGGGCATGTTTATACCGGG‑TGGGAGCCGGTTCACCCCCGAAGAGGCCCGGGCATGCGCCCCCGAGGGCGGGGTCATCGGGGCGCCGAAACCCCGCGCACAGCCCCCATCAAGCGCcgac > 2:3190776/1‑150 (MQ=255) cTTCGGGGGGG‑AACCCGCTCCTACACGGGCATGTGTACCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCt < 1:2178096/150‑1 (MQ=255) ttCGCGGGTG‑AACCCGCACCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCCAACCGCCGCGAACAGACCCGATCAAGCGCCGACCAGGCTc > 2:4731050/1‑150 (MQ=255) ggggTT‑AACCCGCTCCTACATGGGCTTGTGT‑TCCCGGGTTTGGCGGGGTTACCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGtt < 1:6446812/149‑1 (MQ=255) gggTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 1:3745847/1‑150 (MQ=255) gTG‑AACCCGCTCCTACCAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 2:5058063/150‑1 (MQ=255) gttaccccGATCCTACACGGGCTTGTGTATCCCGGG‑TTGGAGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:6153759/145‑1 (MQ=255) aaCCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 1:4972964/1‑150 (MQ=255) aCCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGcggcg > 2:194518/1‑146 (MQ=255) cccGCTCCTCCTCGGGCTGGTGAATCCCTGG‑TCGGCGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg < 2:2394350/150‑1 (MQ=255) cccGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCAGTGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:6799437/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGACCAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:4153956/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:4754568/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:6586064/1‑150 (MQ=255) tCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 1:1978063/1‑150 (MQ=255) ccTACAAGGGCTTGTGTAGCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 1:5059600/150‑1 (MQ=255) cTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 2:2145299/1‑150 (MQ=255) cTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 1:1480489/1‑150 (MQ=255) cTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg < 1:5722924/150‑1 (MQ=255) tACCAGGGCATGTGTATCCCGGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 2:4880766/150‑1 (MQ=255) tACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCggg < 1:2109037/84‑1 (MQ=255) tACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:1656014/1‑150 (MQ=255) tACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:1861544/1‑150 (MQ=255) tACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:4551335/1‑150 (MQ=255) tACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:4624240/1‑150 (MQ=255) tACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:3051362/1‑150 (MQ=255) aacacGGGCTTTTGTACCCCTGG‑TCGGGGGGGTTACCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 1:1228444/149‑1 (MQ=255) aCAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:1871043/1‑150 (MQ=255) aCAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:6052617/1‑150 (MQ=255) cacgggCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt < 1:5584892/147‑1 (MQ=255) cAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCTGGGt > 2:4837170/1‑150 (MQ=255) aaGGGCATGTGTATCCCTGG‑TAGGAGCGGGCTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGTGTTTTCAGGGTg > 1:1161564/1‑150 (MQ=255) gggCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCa > 2:5251171/1‑150 (MQ=255) gggCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCa > 2:2202096/1‑150 (MQ=255) cATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCACCGTAGGGCGGGTTCATCGCGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGATGGCCTGCGTTTTCACGGTGCAACg > 2:4983125/1‑150 (MQ=255) aTGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg < 1:2901807/140‑1 (MQ=255) aTGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 2:2901827/1‑140 (MQ=255) aTGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACgg < 2:3500062/150‑1 (MQ=255) tgtgTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGc < 2:4675663/150‑1 (MQ=255) acatgcccTTG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa > 2:257860/6‑150 (MQ=255) gtATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 2:2516857/1‑150 (MQ=255) gtATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:3940823/1‑150 (MQ=255) tATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGgc < 1:4321102/72‑1 (MQ=255) tATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGgc > 2:4321102/1‑72 (MQ=255) ccTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcgg > 2:4291897/1‑150 (MQ=255) ccTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcgg > 2:442179/1‑150 (MQ=255) tGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 2:3083465/1‑150 (MQ=255) | ACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTG‑AACCCGCTCCTACAAGGGCATGTGTATCCCTGG‑TAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCG > NC_002947/5729158‑5729455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |