| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 68,344 | A→C | 6.9% | intergenic (+32/+143) | PP_0057 → / ← PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 68,344 | 0 | A | C | 6.9% | 1053.6 / 49.0 | 328 | intergenic (+32/+143) | PP_0057/PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (149/156); new base C (14/9); total (163/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.07e-01 | |||||||||||
Only 100 of 336 total aligned reads displayed.
TATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTCAAGCC > NC_002947/68196‑68493 | tataCCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTaaaa > 2:6136356/1‑150 (MQ=255)tataCCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTaaaa < 1:2356415/150‑1 (MQ=255) aCCGGGTATATCTTCTACGGGCTGTGGTACCGGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTTGATATCGACAATGTCTTATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGcc < 1:603971/150‑1 (MQ=255) cGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAATCCgg > 2:3242964/1‑150 (MQ=255) cGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCgg > 1:1781928/1‑150 (MQ=255) ggATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑ttt < 1:1115230/150‑1 (MQ=255) gATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑tttt < 2:2289987/150‑1 (MQ=255) atttcttctACGGGCTGTGGTACCCGGTGCTGGTGTGGGGGATCAGCGTGGTGTTTGTGATGTTCTGTCGGAGTGAATCCTAGTTTGTAGATTTCTACATCGTATGTTGTGCCCATGCGTTAAAAAAACCGGCTGTAAAAGCCGG‑ttttt < 1:1888376/147‑1 (MQ=255) atatCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCGG‑ttttt < 2:4550532/150‑1 (MQ=255) atatCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑ttttt < 1:1936257/150‑1 (MQ=255) tatCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑tttttt > 1:3872483/1‑150 (MQ=255) tcttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTa < 1:3711413/150‑1 (MQ=255) tctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGc < 1:3443362/150‑1 (MQ=255) ctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGcc > 1:331427/1‑150 (MQ=255) ggCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGTTTGGGATCTTCTGTCTTAGAGAAACCAAGGATGTATATATCGACAAATTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATTCCTC‑aaa < 2:2608090/150‑1 (MQ=255) tgtgGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑aaaaaa > 1:5832497/1‑150 (MQ=255) gtgGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑aaaaaaa < 2:3091095/150‑1 (MQ=255) gtgGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑aaaaaaa < 1:5575066/150‑1 (MQ=255) tgGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAAc < 1:853999/150‑1 (MQ=255) gTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACtt > 2:3687965/1‑150 (MQ=255) gTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACtt > 2:1021184/1‑150 (MQ=255) tACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTa < 1:940948/150‑1 (MQ=255) aCCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTAt < 1:528566/150‑1 (MQ=255) cccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATg > 1:4749453/1‑150 (MQ=255) ccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGTGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTTTGCCTC‑AAAAAAACTTATGc > 1:1385821/1‑150 (MQ=255) ccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGc > 1:5921464/1‑150 (MQ=255) ggTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACGTGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCAc > 1:4827677/1‑150 (MQ=255) tGGTGACCGGGAGCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACCAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCCCGAttt > 2:5380255/1‑150 (MQ=255) gTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTc < 2:1723464/150‑1 (MQ=255) gTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTc > 2:5742356/1‑150 (MQ=255) gTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTc > 1:4654168/1‑150 (MQ=255) tGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCa > 2:1573855/1‑150 (MQ=255) gATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGAGGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGaaaaaa < 1:1850579/150‑1 (MQ=255) tCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAAtt > 1:6194283/1‑150 (MQ=255) tCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAAtt > 1:2048357/1‑150 (MQ=255) cAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTGTCAGAAAAAATTc < 2:2412666/150‑1 (MQ=255) aGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCa > 1:4079943/1‑150 (MQ=255) aGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCa < 1:3159563/150‑1 (MQ=255) gCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCaa > 2:2730405/1‑149 (MQ=255) ccTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGACGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATa < 1:3559411/150‑1 (MQ=255) cTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATAc > 2:4823101/1‑150 (MQ=255) gtggtTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACaaa < 2:6750841/150‑1 (MQ=255) ggggTCTTCTGTCTGAGAGACACCAAGGATGTAGATATCGTCAAAGTCTGCTGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGACCACATTCATACAAAGAAATa > 1:1471007/1‑150 (MQ=255) gATCTTCTTTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACTAAGAAATAAc < 2:622176/150‑1 (MQ=255) gATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAAc < 1:5633251/150‑1 (MQ=255) tctgtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTCAAAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGc < 2:3298906/150‑1 (MQ=255) tgtctgTGAGAATCCTAGGATGTAGATATCGACTAAGTCTGATGTCCTCATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAATAATTCATACAAAGAAATAACTAGCaaa < 2:6587533/150‑1 (MQ=255) tctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAtt > 1:506492/1‑150 (MQ=255) tctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGACATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAtt < 1:3496715/150‑1 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCa > 2:1615945/1‑150 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCa > 2:3534302/1‑150 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACATATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCa > 2:6817257/1‑150 (MQ=255) agagaAAACAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATa < 1:5998012/150‑1 (MQ=255) gagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCACATTCATac > 2:5345537/1‑150 (MQ=255) gagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATac > 1:3074957/1‑150 (MQ=255) agaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATaca < 2:5105062/150‑1 (MQ=255) agaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATaca < 2:5552697/150‑1 (MQ=255) aaaCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACt > 1:4367485/1‑150 (MQ=255) aaaCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACt < 2:2897300/150‑1 (MQ=255) aCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTa < 2:3992064/150‑1 (MQ=255) aCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTa < 2:5832497/150‑1 (MQ=255) cAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGa < 1:4224972/150‑1 (MQ=255) aaGGATGTAGAGATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGat < 2:4892822/150‑1 (MQ=255) gTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAAt > 2:4645380/1‑150 (MQ=255) atatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCaa < 2:2049001/150‑1 (MQ=255) atatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCaa < 2:1682961/150‑1 (MQ=255) tatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAg > 1:264724/1‑150 (MQ=255) tCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCa > 1:2107361/1‑150 (MQ=255) gACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAtt > 2:3904874/1‑150 (MQ=255) gACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAtt < 2:515957/150‑1 (MQ=255) aCAAAGTCTGATGTCAACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTATTTTATGCCTC‑AAAAAAACTTATTCACGAGTTTCAGAAACAATTCATACAGAGAAATAACTAGCACATTCATACACTTCGATATCAATTCAAGCAttt > 2:5190491/1‑150 (MQ=255) aaaGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTaa < 1:5305976/150‑1 (MQ=255) aGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATc < 1:6711116/150‑1 (MQ=255) aGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATc < 1:6498070/150‑1 (MQ=255) aGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATc < 2:1080233/150‑1 (MQ=255) aGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTATTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATc > 2:2783073/1‑150 (MQ=255) cTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTGAGATATCAATTCAAGCATTTAATCCaa < 2:4309429/150‑1 (MQ=255) tCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTg > 2:5062798/1‑150 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca < 2:6042131/150‑1 (MQ=255) cacaTGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca > 2:4741435/1‑150 (MQ=255) gCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 2:857664/150‑1 (MQ=255) gCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACaa < 2:3394464/150‑1 (MQ=255) aTAAAAAAACCGGCTTTTACAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGtt > 1:2407858/1‑150 (MQ=255) aTAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGtt < 1:2914706/150‑1 (MQ=255) aTAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGtt > 2:1321330/1‑150 (MQ=255) aaaaaaaCCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAGGCATTTAATCCAAAAACTGCACACAAGTTAt < 1:2005742/150‑1 (MQ=255) aaaaaaCCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc > 1:2583831/1‑150 (MQ=255) aaaaaaCCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc > 1:3859080/1‑150 (MQ=255) aaaaaCCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATcc > 1:708371/1‑150 (MQ=255) aaaCCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCcac > 1:6140007/1‑150 (MQ=255) aaCCGGCTTTTACAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc < 1:274124/146‑1 (MQ=255) aaCCGGCTTTTACAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCcaca > 1:2249731/1‑150 (MQ=255) aaCCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCcaca > 2:4436648/1‑150 (MQ=255) cGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 2:5921353/150‑1 (MQ=255) cGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 1:6094439/150‑1 (MQ=255) ggCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAg < 1:1021184/150‑1 (MQ=255) gCTGTAAAAGCCGGTTTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAg > 2:2526472/1‑150 (MQ=255) cTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGt > 1:2692548/1‑150 (MQ=255) tGTAAAAGCCTG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTc < 2:5322244/150‑1 (MQ=255) aaaaGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTCAAg > 2:2212015/1‑150 (MQ=255) | TATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGG‑TTTTTTTATGCCTC‑AAAAAAACTTATGCACGATTTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGGTCAAGCC > NC_002947/68196‑68493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |