| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,769,882 | C→G | 5.2% | D286E (GAC→GAG) ‡ | ctpA → | carboxy‑terminal‑processing protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,769,882 | 0 | C | G | 5.2% | 1043.5 / 33.0 | 306 | D286E (GAC→GAG) ‡ | ctpA | carboxy‑terminal‑processing protease |
| Reads supporting (aligned to +/- strand): ref base C (157/133); new base G (12/4); total (169/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 309 total aligned reads displayed.
AAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGTGCAGAC > NC_002947/5769733‑5770031 | agCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGAcc > 1:3487704/1‑150 (MQ=255) gcgcGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGc < 1:6226598/150‑1 (MQ=255) gtggtgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGcc > 1:5799405/1‑150 (MQ=255) gtggtgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGcc > 1:5662658/1‑150 (MQ=255) tggtgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCa < 1:5048819/150‑1 (MQ=255) gCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAgcgc > 2:6803018/1‑150 (MQ=255) gACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGc > 1:2964214/1‑150 (MQ=255) cTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTg > 2:4394476/1‑150 (MQ=255) tGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGc < 2:3593924/150‑1 (MQ=255) tGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGc < 2:363396/150‑1 (MQ=255) tGCGCAACAACCCAGGCGGCGTGCTGCAATCGGAAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCACAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGc > 2:202049/1‑150 (MQ=255) aacaacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtg < 1:6808945/150‑1 (MQ=255) aacaacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtg > 1:1607901/1‑150 (MQ=255) acaacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtgg < 1:667862/150‑1 (MQ=255) caacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggt < 2:1772743/150‑1 (MQ=255) accccAGGCGGCGTGCTGCATTCGGCTGTGGATGTGGGCGACCACTTCGTGACCAAAGGTCTGATGGTCTACACGAACGGCCGCATGGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCGGCtggtg < 2:317542/148‑1 (MQ=255) aacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtg < 1:1069367/150‑1 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTg < 1:1117730/140‑1 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtgg > 2:558943/1‑150 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtgg < 2:1438612/150‑1 (MQ=255) ccAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTa > 1:6479300/1‑150 (MQ=255) ccAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTa < 2:377670/150‑1 (MQ=255) aGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtggcatc < 2:2430363/150‑5 (MQ=255) aGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACt > 2:6658624/1‑150 (MQ=255) gcggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa < 1:6591094/150‑1 (MQ=255) gcggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa > 1:4524164/1‑150 (MQ=255) gcggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa > 2:360522/1‑150 (MQ=255) gcggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa < 2:3970650/150‑1 (MQ=255) gcggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGACGTGCCGCTGGTGGTACTGa < 1:6080108/150‑1 (MQ=255) gcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGGGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCa < 2:5292986/150‑1 (MQ=255) cgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCaa < 1:3190262/150‑1 (MQ=255) cgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCaa < 1:4241652/150‑1 (MQ=255) gTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAAc < 2:4220117/150‑1 (MQ=255) tgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTg > 1:4695944/1‑150 (MQ=255) tgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTg > 1:1196044/1‑150 (MQ=255) cAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGc < 2:1607901/150‑1 (MQ=255) aaTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCa > 1:5505460/1‑150 (MQ=255) aaTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCa > 1:3831502/1‑150 (MQ=255) aaTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCa < 2:298409/150‑1 (MQ=255) tCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGt < 1:249061/150‑1 (MQ=255) ggCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgc > 2:5201095/1‑150 (MQ=255) ggCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgc < 1:4318657/150‑1 (MQ=255) gCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgca > 1:2684805/1‑150 (MQ=255) aGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatc > 1:3334915/1‑150 (MQ=255) aGTGGAAGTGGCCGACCACTTCCCGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatc > 1:4576033/1‑150 (MQ=255) gTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatcg > 1:3915670/1‑150 (MQ=255) ggCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGa < 2:1009895/150‑1 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATTGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGaa > 1:6765417/1‑150 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGaa > 1:929564/1‑150 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGaa > 1:5303842/1‑150 (MQ=255) gCCGACCACTTCCTGACCAAAGGTATGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACGCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGaa < 2:834092/150‑1 (MQ=255) cGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAt > 2:2468041/1‑150 (MQ=255) cGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAt > 1:1884759/1‑150 (MQ=255) cGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAt > 2:5926933/1‑150 (MQ=255) gACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCTGCGCGGGCGTGACGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAtt < 2:1893591/150‑1 (MQ=255) gACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAtt < 1:2888251/150‑1 (MQ=255) cTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGc < 1:1418054/150‑1 (MQ=255) ttCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGcc < 1:712242/150‑1 (MQ=255) cTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGgc > 2:2686394/1‑150 (MQ=255) tGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGgcg > 1:1767158/1‑150 (MQ=255) tGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGgcg > 2:6438114/1‑150 (MQ=255) cAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCt > 2:4686643/1‑150 (MQ=255) aaGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGc > 2:4489202/1‑150 (MQ=255) aGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCa < 1:2265097/150‑1 (MQ=255) tGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGAcc > 2:1237833/1‑150 (MQ=255) gATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCa < 2:6191249/150‑1 (MQ=255) acacCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgtg < 1:5564715/150‑1 (MQ=255) cacCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGACATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgtgc > 1:3433062/1‑150 (MQ=255) acCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgtgcc > 1:123688/1‑150 (MQ=255) acCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgtgcc > 2:3851654/1‑150 (MQ=255) acCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgtgcc > 1:4005181/1‑150 (MQ=255) cAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGc < 2:6150328/120‑1 (MQ=255) cAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGc > 1:6150328/1‑120 (MQ=255) cAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgtgccgt > 1:2081165/1‑150 (MQ=255) gCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTTATCAACGTTGGCAGTGCATCGGCTTCTGAAATTGTCGCCTGCGCCCTGCAGGACCAGAAGCGTGACGTGCTGATgg < 1:202049/150‑1 (MQ=255) gCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATgg > 1:3745495/1‑150 (MQ=255) ccAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCg > 1:5226436/1‑150 (MQ=255) ccAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCAGCGGACCTTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCg > 2:5140178/1‑150 (MQ=255) aaCTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGAc < 1:3602855/150‑1 (MQ=255) tCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGc > 2:2891224/1‑150 (MQ=255) tCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGc > 2:2303437/1‑150 (MQ=255) tCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGc > 1:6774150/1‑150 (MQ=255) cGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCtt < 2:2346102/150‑1 (MQ=255) gAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTc < 1:487965/150‑1 (MQ=255) gCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCgg > 2:347763/1‑150 (MQ=255) tggcatcGGCCGGGTCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAg > 1:2359204/6‑150 (MQ=255) tttCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAgg < 2:6133281/150‑1 (MQ=255) ttCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGc > 2:372775/1‑150 (MQ=255) atcGGCCGGGTCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGcgt > 2:3090343/2‑112 (MQ=255) atcGGCCGGGTCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTc > 1:6363075/2‑150 (MQ=255) atcGGCCGGGTCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTc > 2:5790946/2‑150 (MQ=255) tcGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCg < 2:218904/150‑1 (MQ=255) ggCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGt < 1:1471650/150‑1 (MQ=255) ggCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGt > 1:5418376/1‑150 (MQ=255) ggCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGt < 2:3325701/150‑1 (MQ=255) ggCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGt < 1:1648601/150‑1 (MQ=255) ccGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGTGc < 2:5412115/150‑1 (MQ=255) ccGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGTGc < 2:4995524/150‑1 (MQ=255) gACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGTGCAg > 2:4899023/1‑150 (MQ=255) cccGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGTGCAGAc < 1:1708311/150‑1 (MQ=255) | AAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAATTGTCGCCGGCGCCCTGCAGGACCAGAAGCGTGCCGTGCTGATGGGCACCGACAGCTTCGGCAAAGGCTCGGTGCAGAC > NC_002947/5769733‑5770031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |