| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,854,052 | C→G | 6.5% | intergenic (+22/‑249) | rlmI → / → ilvD | ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,854,052 | 0 | C | G | 6.5% | 1345.2 / 60.0 | 402 | intergenic (+22/‑249) | rlmI/ilvD | ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (223/152); new base G (13/13); total (237/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 407 total aligned reads displayed.
GCCACCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCCGCGCGGT > NC_002947/5853903‑5854200 | gCCACCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGccc > 1:1724924/1‑150 (MQ=255) ccACCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCa < 1:6831247/150‑1 (MQ=255) aCCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGc < 1:5034856/150‑1 (MQ=255) aCCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGc > 2:2478036/1‑150 (MQ=255) cTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCgg < 2:2365994/150‑1 (MQ=255) cTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCgg > 2:5226548/1‑150 (MQ=255) ggACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGcc < 1:5885376/150‑1 (MQ=255) ggACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGcc < 1:4914956/150‑1 (MQ=255) aCCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCt > 1:626516/1‑150 (MQ=255) cGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCttt > 1:2915317/1‑150 (MQ=255) cGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCttt > 2:4832124/1‑150 (MQ=255) cAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAGAAAGGGCCGCTGGGCGGCCCttttt < 2:2204677/150‑3 (MQ=255) aaCATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCt < 1:4720001/150‑1 (MQ=255) aTGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGcc < 2:709987/150‑1 (MQ=255) aTGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGcc < 1:5725157/150‑1 (MQ=255) aGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCaa > 2:4392303/1‑150 (MQ=255) ctCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATcccc > 1:1017166/1‑150 (MQ=255) tCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATccccc > 2:423802/1‑150 (MQ=255) cgagGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCa < 1:4117637/150‑1 (MQ=255) gagGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAACAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCaa < 2:6845048/150‑1 (MQ=255) ggTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATc < 1:1921330/150‑1 (MQ=255) aGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCcaca > 2:2117117/1‑150 (MQ=255) ggCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGTAATCCCCCCGCCAACCATCCACATc > 1:1363099/1‑150 (MQ=255) gCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCt > 2:4942194/1‑150 (MQ=255) ccGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGc > 2:308256/1‑150 (MQ=255) ggATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCAt > 2:1204876/1‑150 (MQ=255) gATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCAtt > 2:5366008/1‑150 (MQ=255) aCCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCt > 1:2675486/1‑150 (MQ=255) aCCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCt < 1:5283019/150‑1 (MQ=255) cccGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTc > 2:2962306/1‑150 (MQ=255) ccGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCa > 1:2129544/1‑150 (MQ=255) ggTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCAcc > 1:6144940/1‑150 (MQ=255) acCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGcc > 1:1450444/1‑150 (MQ=255) acCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGcc > 1:2799292/1‑150 (MQ=255) ccGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAg > 1:2503832/1‑150 (MQ=255) ggCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCg < 1:3894829/150‑1 (MQ=255) gCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCgg < 1:1567926/150‑1 (MQ=255) ccctCGCCGAAACCCGCTACATCAACCGCATCACCTGCCGGTTACTGCCAAACAGCTGAGATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCCCATCTGCATTCCCTCACCGCGCCAGCGgt < 1:5971116/147‑1 (MQ=255) ccATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgt > 2:6558114/1‑150 (MQ=255) ccATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgt > 2:778067/1‑150 (MQ=255) cATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgtg < 2:669981/150‑1 (MQ=255) tCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTa < 2:2863250/150‑1 (MQ=255) tCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTa > 2:1314698/1‑150 (MQ=255) tCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTa < 1:463256/150‑1 (MQ=255) cGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAAt > 2:3293808/1‑150 (MQ=255) gAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATc < 2:571172/150‑1 (MQ=255) aCCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGc < 1:3189780/150‑1 (MQ=255) cccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGcc < 2:3426184/150‑1 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCt > 2:433179/1‑150 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCt < 2:2727851/150‑1 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCt > 2:6233237/1‑150 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCt > 1:6709631/1‑150 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCt > 2:4520847/1‑150 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCt > 1:5062516/1‑150 (MQ=255) gCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTAt > 2:4637773/1‑150 (MQ=255) cTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTAtt > 2:6014899/1‑150 (MQ=255) cATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCAt > 2:5402587/1‑150 (MQ=255) aTCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATc > 2:5922571/1‑150 (MQ=255) tCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCg > 2:6355292/1‑150 (MQ=255) tCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCg > 1:6404911/1‑150 (MQ=255) tCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCg > 2:5070220/1‑150 (MQ=255) cAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGc < 1:2428495/150‑1 (MQ=255) aaaaGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGcc > 2:1753675/1‑150 (MQ=255) aaaaGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGcc > 1:377484/1‑150 (MQ=255) aaaGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCa > 2:6452520/1‑150 (MQ=255) aaaGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCa > 1:6098393/1‑150 (MQ=255) tCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATc > 2:354241/1‑150 (MQ=255) aCCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATccc > 1:6086581/1‑150 (MQ=255) tGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCcgg > 1:4265027/1‑150 (MQ=255) gCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCcggc > 1:2033932/1‑150 (MQ=255) cGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCCGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCcggcgg < 1:4556423/150‑1 (MQ=255) cGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCcggcgg < 1:5563773/150‑1 (MQ=255) aCTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTa < 2:2770951/150‑1 (MQ=255) cTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTAt < 1:5406210/150‑1 (MQ=255) cTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTAt < 1:3569736/150‑1 (MQ=255) ccAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAg > 1:6484989/1‑150 (MQ=255) ccAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAg > 1:2181891/1‑150 (MQ=255) aaCAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCAGTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGctc < 2:3783811/150‑1 (MQ=255) aCAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGctct > 2:5651797/1‑150 (MQ=255) cAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTg < 1:3436284/150‑1 (MQ=255) cAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTg < 2:6094157/150‑1 (MQ=255) cAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTg < 2:4995227/150‑1 (MQ=255) gATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGTGTTTATTAGCTCTTGTCaa < 2:1860888/150‑1 (MQ=255) gATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCaa < 1:6225818/150‑1 (MQ=255) atatCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAg > 2:1157426/1‑150 (MQ=255) tCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCAc > 2:6668619/1‑150 (MQ=255) tGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATACCCTCACCGCGCCAGCGGTGTAGAATCGGCCTAGTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCAcgc > 1:1776623/1‑150 (MQ=255) gcaggaaaGGGCCGCTGGGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCAcgcg > 1:1312623/6‑150 (MQ=255) gCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCAcgcg > 1:1069085/1‑150 (MQ=255) ccAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcgg > 2:2042710/1‑150 (MQ=255) ccAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcgg > 1:5179598/1‑150 (MQ=255) aaaaaGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCca < 1:4430124/54‑1 (MQ=255) aaaaaGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcggcg > 1:707228/1‑150 (MQ=255) aaaaaGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcggcg > 2:3635803/1‑150 (MQ=255) gaaaGGGCCGCTGGGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGa > 1:2581996/2‑150 (MQ=255) aaGGGCCGCTGGGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATc > 1:879023/1‑150 (MQ=255) ggCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCcg > 2:1678041/1‑150 (MQ=255) cgccCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCcgcgc < 1:3361271/150‑1 (MQ=255) cgccCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCcgcgc < 1:4392303/150‑1 (MQ=255) gccCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCAGCCCCCGCTGCATTCCCGCCCCGCGCCAGCGGTGTAGAATCGGCCTCTTCATCGCCAGTCAGCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCcgcgcg < 1:3127178/150‑1 (MQ=255) | GCCACCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCCGCGCGGT > NC_002947/5853903‑5854200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |