| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,875,332 | A→T | 11.7% | intergenic (+88/+46) | PP_5144 → / ← ptsP | hypothetical protein/phosphoenolpyruvate‑dependent regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,875,332 | 0 | A | T | 11.7% | 291.9 / 4.7 | 123 | intergenic (+88/+46) | PP_5144/ptsP | hypothetical protein/phosphoenolpyruvate‑dependent regulator |
| Reads supporting (aligned to +/- strand): ref base A (75/18); new base T (4/11); total (82/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.43e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
GCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGCT > NC_002947/5875190‑5875479 | gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGGACCCGCGCCCACACCCGCCGGGGGGCCCCCCCCCCGGTGTGTAGGGGGTGGGAGCgg > 1:845733/1‑150 (MQ=255) tCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGAACCCCCGCCGACAAACGCCGGGGTCCAAACCCAAAAGTGTTTAAGTGGTAGGTGCggggtaacac > 1:4821425/1‑143 (MQ=255) gggCCTTTTGGAGGGCAGTTGGTGTAAATTGATTTGTTGGTATGATTATTTGATGTTGTCTGTTCGGGCATCTTCGCGGGTGTAACCCCTCCAAAAAACGCATTGGTCCAACCCCAGATGTGGTTTAGTGGTAGGAGCGGGttaaacccc > 2:769965/1‑143 (MQ=255) tttgGGGGGGCTTTTGGGGTAATTTGAGTTGTGGGTCTTAGTATTTGATGTTGTCTTTTGGGGCCTCTTCGCGGGGGACCCCGCTCCTCCAACGGCCTGGGTCAAACCCCATATGTGTTTACGTGGTAGGAGCGGGTTCACCCGCGAaga < 2:1872981/150‑1 (MQ=255) gCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCGCTCCTAAAACGGCCTGGGTCCAAACCCAGATGTGTGTAAGTGGTAGGAGCGGGTTCACCCCCGAACAGGCCg > 2:867911/1‑150 (MQ=255) cGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCAGGGTCCAAACCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg > 2:1616006/1‑150 (MQ=255) gggCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTACCCCCGCCGACAACCGCCGGGGGCCAACCCCCCCGGGGGGTACGTGGGAGGAGCGGGGTCACCCGCCCAGAGGCCGGc > 2:314332/1‑150 (MQ=255) gggCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCGCTCCTACAACCGCCAGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCAACCCCGAAGAGGCCGGc > 2:1160969/1‑150 (MQ=255) gCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCACCAACAAACGCCAGGGTCCAACCCCAGAAGTGTGTAAGTGGTAGGAGCGGGGTCACCCCCCAACAGGCCGGcac > 2:310533/1‑150 (MQ=255) gCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGTACCCCCACCAACAAACGCCAGGGTACAAACCCCCAAGATTGTACGGTGTTGGAGCGGGGTGACCCCCCAACAGGCCCGccc > 1:2934164/1‑148 (MQ=255) tttGGGGTAATTTGCGTTGTTGGTCTTTGTTTTTGTTGTTTTCTTTTGGGGCCTCTTGGGGGGTGAACCCGCTCAAACACCGGCCGGGGTCCAACCCCTTTTGTGTGTAGGTGTTCGTCGGGGTTTCACCCGCGAAGAGGCCGGCACaaa < 2:3312236/150‑1 (MQ=255) tttGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCGCCTACAAAGGCCAGGGTCCAACCCCAGATGTTTGTAAGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACaaa > 1:6189590/1‑150 (MQ=39) gggtattttGTGTTGTTGTTGTGTGTTTTTGATGGTGTCTGTTCGGGCCTCTTCGGGGGTGAACCCGCTCGAACACGGGCCTGGGTCCAACCCCTTATGTGTGTACGTGGTTGGAGGGGTTTCACCCGCGAAGAGGCCGGCACAAACAGc < 2:3911170/143‑1 (MQ=255) gggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCa > 2:6284158/1‑150 (MQ=255) gggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCa > 2:6284174/1‑150 (MQ=255) ttgttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTGCAACGGCCTGGGTCCAACCCCAGATGTGTGGAGGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTcaca > 2:2778652/1‑150 (MQ=255) ttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTACCCGCTCCTACAACCGCCGGGGTGCAACCCCCGATGTGGGTTCGGGGTTGGGGCGGGGTGACCCCCGAAGATGCCGGCCCAAACAGCATAACCCGCACAggg > 2:234064/1‑150 (MQ=255) ttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAggg > 2:4985753/1‑150 (MQ=255) gTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAAAGGCCTGGGTCCAACCCCCGATGTGGGTACGGGGTTGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCAACACCCTCACAgggggt > 2:5242407/1‑147 (MQ=38) gTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTACTACAACGGCCTGGGTGCAACCCCCGATGTGTGTACGTGGTAGGAGCGGGTTAACCCCCGAAGAGGCCGGCACAAACACCAACACCCACACAGGGttt > 2:5242614/1‑150 (MQ=38) cTGATTTTTTGATGTTGGCTGTTCGGGCCTCTCCGGGGTTGAACCCGCCCCTACACCGGCCTGGGCCCACCCCCAGATGTGTGTACGTGGTCGGCGGGGGTACCCCCGCGAAGAGCCCGGCACAAACAGCATCACCCTCACAGGGTTtta < 1:1622959/150‑1 (MQ=255) tgtgTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGATCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTttat < 2:5666485/147‑1 (MQ=255) tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTGttat > 2:4456895/1‑150 (MQ=255) tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCGCCAACAACGGCCGGGGTCCAACCCCAGATGTGTGTACGTGGTAGGGGCCGGTTCAACCGCGAAGAGGCCGGCACAAACAGCAACACCCACACAGGGGTTTTTTAGccc > 2:2409373/1‑150 (MQ=37) tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCGCGCCAACAACCGCCTGGGTCCAACCCCACATGTGTGTACGTGGTGGGAGCGGGTTCACCCCCCAAGAGGCCGGCACAAACAGCATCACCCACACAGGGTTTTATTAGccc > 2:1946154/1‑150 (MQ=255) gATGTTGTCTGTTCGGGCCTCTTCGCGGGGGGAACCCCGCCGAAAACCGCCGGGGTGCAAACCCACATGTGTGTTAGTGGGTGGGGCGGGGTGACCCCCGCCGAGGCCCGCCCAAAAAGCAACAACCACAAACGGGTTTTTTAGcccccc > 2:2271680/1‑148 (MQ=255) ttgtCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCAGGGTCCCACCCCAGATGTGTGTACGTGGTAGGGGCGGGGTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGccc > 2:2145008/1‑150 (MQ=255) gtCTGTTCGGGCCTGTTCGGGGGTGAACCGGCTCCTACACGGGCCTGGGTCCACCCCCTGTTGTGTGTAGGTGGTAGGCGCGGGTTCACCGGCGAAGAGGCCGGCACAAACAGCATCACCCTCACCGGGTTTTATTAGCCCCAGGCCCaa < 2:3962014/150‑1 (MQ=255) gtCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGGCCAACCCCTGATGTTTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCaa < 2:4572264/150‑1 (MQ=255) tCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAat > 2:2785178/1‑150 (MQ=255) ggggCCTCTTGGGGGTTGAACCCGCTCCAACAAGGGCCTGGTTAAAACCCATTTTTTTTTTAGGTGGTTGTCGGGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCcg < 2:690446/149‑1 (MQ=255) ggggCCTCTGGGGGGGTTACCCGGCTCATACCAGGGCGTGGGTCCACCCCCTTTGGTGTGTCGGGGTTTGTTGCGGGTACCCCCGCTAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCcg < 2:833030/149‑1 (MQ=255) gggttgcaCCCGACCCAACACCGGCGGGGGTCCAACCCATTTTGTGTGTAGGGGGTCGGTGGGGGTACACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAg < 1:6205684/143‑1 (MQ=255) gggTGAACCCGCTCCTACAACGGCCTGGGTCAAACCCCTGTTTTGTGTAGGTGGTAGGTGGGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAgg < 2:5456311/150‑1 (MQ=255) ggTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGt > 1:6035860/1‑150 (MQ=255) gTGAACCCGCTCCTACAACGACCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGtt < 2:6807220/150‑1 (MQ=255) gAACCCGCCCCTCCACGGGCCTGGGTCCACCCCCAGATGTGTGTACGTGTTAGGAGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttct < 2:5361218/150‑1 (MQ=255) caCCCGCTCCTACACCGGCCTGGGTCCAACCCCTTTTGTGTTTACGTGGTTGGAGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttctt < 2:1108497/149‑1 (MQ=255) aCCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttcttc > 2:6228371/1‑150 (MQ=255) cccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCa > 2:6760298/1‑150 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAgg > 1:5601607/1‑142 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAgg < 2:5601607/142‑1 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg > 1:5516339/1‑150 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg > 1:1939486/1‑150 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg > 2:4476969/1‑150 (MQ=255) cTCCTACACCGGCCTGGTTCCAACCCAAGATGTGTGTCCGTGGTTGGTGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGc < 2:1092184/150‑1 (MQ=255) cTCCTACAACGGCCTGGGTCCAACCCAAGTTGTGTGTAGGGGGTAGGAGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGc < 2:3608848/150‑1 (MQ=255) tCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGcc > 1:4546572/1‑150 (MQ=255) tCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGcc > 2:2721942/1‑150 (MQ=255) ccTACACCGGCCGGGGCCCAACCCCAGTTGTGGGTACGTGGTCGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCa < 2:5423155/150‑1 (MQ=255) cTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAg > 1:5417366/1‑150 (MQ=255) cTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAg > 1:6359694/1‑150 (MQ=255) cTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAg > 2:1105964/1‑150 (MQ=255) tACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGccc < 1:6608790/113‑1 (MQ=255) tACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGt > 1:6194485/1‑150 (MQ=255) ccaccGGCCTGGGTCAAACCCCTGATGTGTGTACGTGGTCGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 2:3263602/146‑1 (MQ=255) cAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTg > 2:2511606/1‑150 (MQ=255) cAACGGCCGGGTTCCAACCCCTGTTGTGTGTACGTGGTTGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTg < 2:3481630/150‑1 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCg > 1:3032101/1‑65 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCg < 2:3032101/65‑1 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGc > 1:4552533/1‑150 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGc > 1:4730952/1‑150 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGc > 1:4552658/1‑150 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGc > 2:5373655/1‑150 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGc > 1:4552559/1‑150 (MQ=255) aaCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGc > 2:2640653/1‑150 (MQ=255) ccGGCCTGGGCCCAACCCAATATGTGTGTACGTGGTAGGAGGGGGTCCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCa < 2:4220461/149‑1 (MQ=255) gCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCg > 2:2337547/1‑150 (MQ=255) gcggggCCCACCCCCTGTTGTGTGCAGGTGGTCGGGGGGGGTCCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGa < 1:6253318/147‑1 (MQ=255) tGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGc > 2:6105318/1‑150 (MQ=255) ggTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtg > 1:5595960/1‑150 (MQ=255) ggTCCAACCCCAGAGGGGTGTACGTGGTAGGAGCGGGTTCACCCGCGAATCGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtg < 2:6261269/150‑1 (MQ=255) gTCCAACCCCTTTTGTGTGTACGGGGTCGGAGCGGGTACACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtgt < 2:181952/150‑1 (MQ=255) gTCCAACCCCCGTTGTGTGTAGGTGGTAGGCGCGGGTTCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtgt < 2:2635894/150‑1 (MQ=255) caaaCCCCAGATTTGGTTAGGTGTTTGGTGGGGGTACACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTgg < 2:2546279/148‑1 (MQ=255) cAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGa > 2:4102193/1‑150 (MQ=255) cAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGa > 1:2761582/1‑150 (MQ=255) cAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGa > 1:2854584/1‑150 (MQ=255) aaCCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGAt > 2:5420120/1‑150 (MQ=255) ccccAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATaa > 1:1890255/1‑150 (MQ=255) cccTGATGTGTTTCGGTGGTTGGAGGGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAc < 2:2446521/150‑1 (MQ=255) cccAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAc > 2:4849463/1‑150 (MQ=255) cccAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAc > 2:296688/1‑150 (MQ=255) cccAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAc > 1:590948/1‑150 (MQ=255) ccAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAcc > 1:4472904/1‑150 (MQ=255) tttgtttgTACTTGGTAGGAGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCGGGCCCAATCATCCGCGCCAACCCAAGGTTATTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGc < 2:5151874/148‑1 (MQ=255) gATGTGTGTCGGGGGTTGGCGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGc < 2:1254600/150‑1 (MQ=255) gATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGc > 2:6791956/1‑150 (MQ=255) tgtgtgTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCgg > 2:4598276/1‑150 (MQ=255) tgtgtACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGt > 2:1760638/1‑150 (MQ=255) gtgtcggTGGTTGGGGGGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGtt < 1:2672513/144‑1 (MQ=255) gtgtACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGtt > 2:3580432/1‑150 (MQ=255) tttaggTGGTCGGTGGGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTg < 2:1870753/145‑1 (MQ=255) tgtCCGGGGTTGGCGGGGGTCCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTg < 1:497331/150‑1 (MQ=255) ccGTGTTAGGCGGGGGTCCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCa < 2:829139/149‑1 (MQ=255) gTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATg > 1:5052722/1‑150 (MQ=255) gTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATg > 2:5342665/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATgg > 2:2310737/1‑150 (MQ=255) ggTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGc > 1:2765373/1‑150 (MQ=255) gTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGCt > 2:2687876/1‑150 (MQ=255) | GCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGCT > NC_002947/5875190‑5875479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |