| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,037,805 | A→G | 10.2% | intergenic (+64/+72) | dppA‑IV → / ← PP_5284 | dipeptide transport protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,037,805 | 0 | A | G | 10.2% | 405.2 / 26.6 | 150 | intergenic (+64/+72) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (53/76); new base G (7/8); total (61/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.65e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
GACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCA > NC_002947/6037657‑6037953 | gACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGAc > 2:6168553/1‑150 (MQ=255) aCCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACg < 2:5497736/150‑1 (MQ=255) aCCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACg < 1:2460568/150‑1 (MQ=255) ccTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGc < 2:899313/150‑1 (MQ=255) cTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCt > 1:2222194/1‑150 (MQ=255) ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTa < 2:4601764/150‑1 (MQ=255) ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTa < 1:564636/150‑1 (MQ=255) ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTa < 1:5119382/150‑1 (MQ=255) tgctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTAc < 2:492530/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTAccc < 2:6762481/150‑1 (MQ=255) gcgcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCt < 1:2837631/150‑1 (MQ=255) cgcCAAGGCGTCGAGGGGTACCTGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTg < 1:1206915/150‑1 (MQ=21) gcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGt < 2:4407183/150‑1 (MQ=25) gcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGt > 2:2667640/1‑150 (MQ=255) gcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGt < 1:169277/150‑1 (MQ=255) gcAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTa < 2:2818819/149‑1 (MQ=25) ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTa < 1:2265085/150‑1 (MQ=255) aaGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAgg < 2:6474743/150‑1 (MQ=255) aGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGa < 1:3526253/150‑1 (MQ=25) gCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGc > 2:235827/1‑150 (MQ=255) gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTTCAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCgg < 1:6709574/150‑1 (MQ=255) gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTg < 1:1415615/141‑1 (MQ=21) tCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCggg < 2:3835019/150‑1 (MQ=255) gggTACCAGGTGAGCCCGTTCGGGCGGCTGGTTTTCAGCACGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCGAGCCTGGCT‑GTTGACGCTACCCCTGTAGGAGCGGGTTTAc < 1:400931/150‑1 (MQ=255) gggTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTAc < 1:1028327/150‑1 (MQ=255) ggTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACCGGGGTAGCGCCAGCCTGGCA‑GTCGACGCTACCCCTGTAGGAGCGGGTTTAcc < 2:6389956/150‑1 (MQ=255) ggTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTAcc < 2:3883471/150‑1 (MQ=255) ggTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTAcc < 2:4973407/150‑1 (MQ=255) aCCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCcgc < 1:6120792/150‑1 (MQ=255) cAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAAAACGCACCAAAAGGGGTAGCGCCACCCTGGGG‑GGTGACGCGACCCCCGTAGGAGCCGGTGTAACcccgc > 1:716366/1‑149 (MQ=255) gTGAGCCCGTTCGGGCGGCTGGATTTCAGCACGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTCCAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGTTTTACCCGCGaaga < 2:3628875/150‑3 (MQ=17) gTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaga < 2:6170423/150‑3 (MQ=18) cccGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGccc < 2:4545475/150‑1 (MQ=255) gtgcGGGGGGCTGGATTTCAGCATGGTGACGGTGACCAAGTACGCCTGTACCGGCCTCTGCGCGGGTAAACCCGCTCCTACCGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTCGGCGGGGGTTTACCCGCGAAAGGGCCCGTa < 2:6351441/147‑1 (MQ=255) ttCGGGCGGCTGTTTTTCAGCATGGGGACGTTGACCAAGTAAGCCTGTACCGGCCTCTTCGGGGGAAAACCCGCTCCTCCCGGGGTAGCGCCAGCCTGGCT‑GTGGAGGCTACCCCTGTAGGTGCGGTTTTACCCGCGAAAGGGCCCGTAc < 1:3921933/150‑1 (MQ=255) ggcggcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGGGGTTTTACCCGCGAAAGGGCCCGTACTGAc < 1:6249644/150‑1 (MQ=255) ggATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCGGGCA‑GTTGACGCTACCCCAGTAGGAGCGGGGGTACCCGCGAAAGGGCCCGTACAGACCCTaaaa > 2:5257203/1‑150 (MQ=38) tCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCGGTAGGGGCGGGTTTACCCGCGGAAGGGCCCGTACTGACCCTATAAGGctc > 2:3005651/1‑150 (MQ=255) aGCAAGGTGCCGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCCCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTTTAGGAGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCtctc < 2:2364625/150‑1 (MQ=255) ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCCCTCCTACAGGGGTAGCGCCAGCCGGGCA‑GGTGAAGCTACCCCAGTAGGAGCGGGGTTACCCGCGCAAGGGCCCGTACTGACCCGATAAGGCTCACAGTAc > 1:5007216/1‑150 (MQ=38) gtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACt > 2:3872804/1‑150 (MQ=255) tgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTAcc > 2:5424720/1‑108 (MQ=255) gtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCTCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa < 2:1511700/150‑1 (MQ=255) gacCTAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCT‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGa < 2:543171/150‑1 (MQ=255) cAATTAAGCCTTTACCGGCCTCTGCGGGGTTAACCCCGCCCCTACCGGGGTAGCGCCAGCCGGCCC‑GTGCACGCACCCCGGGTCGGCGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACca < 1:1275897/150‑1 (MQ=255) gTAAGCCTGTACCGGCCTCTTCGCGGGGAAACCCGCGCCGACCGGGGGCGCGCCCCCCGGGCC‑GTTGACGCTCCCCCGGGAGGAGCGGGGGTACCCCCGAAAGGGCCCCGACAGCCCCGAGAAGGCGCGCAGGACGCCCGCAGccccccc > 2:630223/1‑146 (MQ=255) aaGCGTGTACGGGCATGTTGGCGGTTAACCCCGCTCCTACGGGGTTCGCGCCAGCGTGGCT‑GTTGACGCTACCCGTTTTGGAGGGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATc < 1:4638914/150‑1 (MQ=255) tGTACCGGCCTCTTGGGGGTTAAACCCGCTCCTACGGGGGTAGCGCCTGCGTGGCT‑GTTGCCGCTACCCCTTTTGGAGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAccc < 1:5423593/150‑1 (MQ=255) tACCGGCCTCTTCGCGGGTAAACCCGCTCCTACTGGGGTAGCGCCTGCCTGGCT‑TTGGACGCTACCCCTGTAGGCGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCAt < 1:996700/150‑1 (MQ=38) ggCCTGTTCGCGGTTAAACCCGCTCCTACTGGGGTAGCGCCCGCCTGGCA‑TTTTACGCTACCCCTTTTGGAGGGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTc < 1:5242686/150‑1 (MQ=255) ccccggcgcgGGGAACCCCGCTCCTACCGGGGTAGCGCCCGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGGGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTCTACGGCTCTCAGTACTCCCTCAGACCACAATCCACCCCGGCTCGa < 2:5184202/144‑1 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCTGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGa < 1:6283394/150‑1 (MQ=255) tttCGGGGGAAAACCCGCTCCTCCGGGGGTCGCGCCCGCCTGGCT‑GTGGCCGCTCCCGGTTTTGGTGGGTTTTTCCCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCa < 1:1703135/149‑1 (MQ=255) tCGGGGGTAAACCCGCTCCTACCGGGGTAGCGCCAGCCTGGCT‑GTTGACGCTACCCCTGTAGGAGGGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc < 1:4216183/150‑1 (MQ=255) tCGCGTGTAAACCCGCTCCTACCGGGGTCGCGCCAGCCTGGCA‑TTTGACGCTACCCCTGTTGGAGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc < 1:384079/150‑1 (MQ=255) tCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc < 2:3936963/150‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTa < 2:2609708/52‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTa > 1:2609708/1‑52 (MQ=255) gcgGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGa > 1:4400300/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACa > 1:2216846/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc > 2:763426/1‑150 (MQ=21) gTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc > 2:2715004/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc > 1:6004825/1‑150 (MQ=255) tAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACg > 1:1535935/1‑150 (MQ=255) cccGCTCCTACCGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc < 2:5609808/150‑1 (MQ=255) ccGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGGTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcc > 1:5762992/1‑150 (MQ=255) cGCTCCTCCCGGGGTAGCGCCAGCCTGGCT‑GTTGACGCAACCCCTTTAGGAGGGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTccc < 2:5728641/150‑1 (MQ=255) gCTCCTCCAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcccc < 1:5634620/150‑1 (MQ=255) gCTCCTACAGGGGTAGCGCCAGCCGGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcccc < 2:4139577/150‑1 (MQ=255) tACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:3366984/1‑150 (MQ=25) tACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:6685364/1‑150 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 1:5402634/1‑150 (MQ=255) cAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCa > 1:3249532/1‑150 (MQ=21) cAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa > 1:2398554/1‑101 (MQ=255) cAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa < 2:2398987/101‑1 (MQ=255) cggggTAGGGCCCGCCTGGCT‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa < 2:6388543/149‑1 (MQ=255) aGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa > 1:3295610/1‑150 (MQ=255) gggtTAGCGCCAGCCTGGCA‑GTTGACGCCACCCCTTTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat < 1:2716208/150‑1 (MQ=255) gggtTAGCGCACGCCTGGCT‑GTTGCCGCTACCCTTTTTGTCGGGGTTTTCCCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat < 1:574247/150‑1 (MQ=255) ggggTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTTGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat < 1:5000909/150‑1 (MQ=255) gggTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatg > 1:166507/1‑150 (MQ=255) gTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:454984/1‑150 (MQ=255) gTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCAGCACCAatgat > 2:1339350/1‑150 (MQ=255) tAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatg > 2:6668947/1‑150 (MQ=255) gcgcCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 2:1675412/150‑1 (MQ=255) gcgcCAGCCGGGCA‑GTTCACGCTACCCAGTTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTTACCCTATAAGGCTCTCATTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 1:6812404/150‑1 (MQ=255) cAGCCTGGCA‑GTTGACGCTACCCCTGTTGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGa < 2:6520354/150‑1 (MQ=255) cAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGa > 2:4572151/1‑150 (MQ=255) cAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGa > 2:2173688/1‑150 (MQ=255) cAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGa > 2:2098139/1‑150 (MQ=255) aGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGAt < 2:346092/150‑1 (MQ=255) ccTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATcc > 2:1732415/1‑150 (MQ=255) ccTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATcc > 2:1732395/1‑150 (MQ=255) tGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAg > 2:6778213/1‑150 (MQ=255) ggCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGc > 2:1263604/1‑150 (MQ=255) ggCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGc > 2:4665460/1‑150 (MQ=255) ggCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGAGATCCAGc > 2:3915761/1‑150 (MQ=255) gCA‑GTTGACGCTACCCCTGTAGGAGCGGTTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCa < 2:6017633/150‑1 (MQ=255) ttGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCg > 2:2565822/1‑150 (MQ=255) gACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGca > 2:303046/1‑150 (MQ=255) | GACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCA > NC_002947/6037657‑6037953 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |