| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,055,789 | A→G | 7.3% | E549G (GAA→GGA) | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,055,789 | 0 | A | G | 7.3% | 611.3 / 7.6 | 212 | E549G (GAA→GGA) | spoT | bifunctional (p)ppGpp synthase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (41/141); new base G (14/2); total (69/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 217 total aligned reads displayed.
AGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACT > NC_002947/6055641‑6055938 | agcagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGaa < 1:4114652/150‑1 (MQ=255)agcagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGaa < 2:2876675/150‑1 (MQ=255) gcagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAAc < 1:3124604/150‑1 (MQ=255) cagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACa < 1:3717850/150‑1 (MQ=255) cagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCAGCGGGGGGCCGAAGGCGAACa > 1:4566647/1‑150 (MQ=255) gcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCCGCGGTCGGCCGGCGGCGGACacc > 1:1072103/1‑148 (MQ=255) gcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCAGCAGTCGGCCGAAGGCCAACaac > 1:6137357/1‑148 (MQ=255) tGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCGCCAGCAGTCGGGCCGAGGCGcacaccagc > 1:5986584/1‑145 (MQ=255) tGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCCGCAGTCGGCCGAAGGCGGAAagcagc > 1:2127357/1‑150 (MQ=255) gagaAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCGGCTGTCGGCCGCAGGCGAACAGCGGCCg > 2:3238561/1‑150 (MQ=255) gagaAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCGGCGGGCGGCCCGAGGCGGACAGCAGccc > 2:2599957/1‑149 (MQ=255) agaAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCgg < 1:1555575/150‑1 (MQ=255) aaTCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCAGCGGGCGGCCGCAGGCGGCCAGCGGCCGGCGcc > 2:4081975/1‑150 (MQ=255) tCCCCCAGGAACGCATCCAGTCTATTCTCGCCTTTTACCGCGTGGAGCTCATATAAGACCTGCTCGAAGACATGGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCGGGCAGCTGTTCGCCTTCGGCCGACAGCAGGCGgcgcgcg < 1:3658711/150‑4 (MQ=21) ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCCCCCGCGGGCGGCCGCAGGCCGAAACCAGCCGGCGCCCGac > 1:1748874/1‑149 (MQ=255) ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCCCCGGTGGGCCGCACGCGCACAACAGCCCGCGccccac > 1:4110108/1‑146 (MQ=255) ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACAGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGaa > 1:1105503/1‑150 (MQ=255) cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCCCCCGCAGTCGGCCCCACGCGCACAGCGGCCGGCGccccaac > 1:4695260/1‑145 (MQ=255) cAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGc < 2:3206494/150‑1 (MQ=255) aGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCCCCAGCGGGGGGGCGAAGGCCAACAACAGCCGGCCCCCGAAGGcc > 2:2873026/1‑150 (MQ=255) aGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGcc < 2:2469278/150‑1 (MQ=255) aaCGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGTGGGccttc < 1:2224005/150‑4 (MQ=255) aaCGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCAc < 1:6470259/150‑1 (MQ=255) aCGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCGGCGGTCGGCCGGAGGCGCACAGCGGGCCGCGCCCGAAGGccccca > 2:2984723/1‑147 (MQ=255) gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTgg < 2:5997418/150‑1 (MQ=255) gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTgg < 1:5800414/150‑1 (MQ=255) gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTgg < 2:4913609/150‑1 (MQ=255) aTCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCCGCGGGCGGCCGCAGGCGGCCACCGGCCCGCGCCCGCAGGCCCCCAGGCg > 2:2952215/1‑150 (MQ=255) cAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCAGCTGGCGGCCGCAGGCGGACAGCGGCCGGCGCCCCAAGGCCCCCAGGCGCTc > 2:5697877/1‑150 (MQ=255) cAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCAGCTGTCGGCCGCAGGCGAACAGCTGCCGGCGCCCGAAGGCCCCCAGGCGATc > 2:3988842/1‑150 (MQ=255) aGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCGCCAGCGGTGGGCCCCAGGCGCCCACCAGACGGCGCCCCAAGGCCCCCAGGCGAtgc > 2:2335030/1‑148 (MQ=255) aGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATcc < 2:838259/150‑1 (MQ=255) gTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCCCCGGCGGGGGGGCGCAGGCGACCCCCGGCCCGGGCCCGCAGGCCCCCCGGCgcggcg > 1:6451619/1‑145 (MQ=255) tATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCgg < 2:4420788/150‑1 (MQ=255) aTTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCCCCCGCCGTCGGCCGAAGGCGGACAGCAGGCCGCCCCCGAAGGCCCACCCGCGGTCCCCGGc > 2:2649282/1‑150 (MQ=255) tACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTg < 1:1191414/150‑1 (MQ=255) ccTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCt < 1:1832883/150‑1 (MQ=255) tGGAGCTCATAGGAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCa < 1:5494903/150‑1 (MQ=255) cTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTAc < 1:1482998/150‑1 (MQ=255) cTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTAc < 2:252604/150‑1 (MQ=255) cATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTAcac < 1:5650552/150‑3 (MQ=255) agaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCaa < 2:2166815/150‑1 (MQ=255) agaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCaa < 2:3652236/150‑1 (MQ=255) agaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCGGCTGTGGGGCGCAGGCGACAAGCTGCCCGCGCCCCAAGGCCCACAGGCGATCCGCGGCACCCCAGGCCAGGTGCTCAGCGACGCCaa > 2:2050696/1‑150 (MQ=255) agaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGGTGTCGGCCGAAGGCGACAAGCTGCCCGCGCCAGAAGGCCCCCTGGCGCGCCGCGGCCCCGCCGGCCGGGGGCTCCGCGACGCCaatgg > 2:6590017/1‑147 (MQ=255) cTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGtgctgc < 1:2106187/150‑1 (MQ=255) gCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCAc < 1:4483305/150‑1 (MQ=255) tCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCGCCGGCGGTCGGCCCCAGGCGCCCAGCGGCCGGCGCCCCAACGCCCACAGGCGCTCCGCCGCACCGCAGGCCGGGGGGGCCGCGACGCCAACagctgggccc > 2:76791/1‑145 (MQ=255) tCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGc < 2:5407382/150‑1 (MQ=255) tCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGc < 1:1632174/150‑1 (MQ=255) tCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCGGCGGTCGGCCGCAGGCGGACCCCTGCCGGCGCCCCAAGGCCCACAGGCGCTCCGCGGCACCCAACGCCAGGGGGGCAGCGACGCCCACTGCTGCAccc > 2:1539105/1‑148 (MQ=255) gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGGGCCGCCTGCTGTGGGCCGGAGGCGTTCAGCTGCCGGGGGCCGTAGGCCCCCAGGCGGTGCGCGGCACCCAAAGCCGGGTGGTCAGCGACGCCCAGTGGTGCACGCCg > 2:3797793/1‑150 (MQ=255) gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCAGCTGTCGGCCGAACGCGAACACCGGCCCGCGCCCCAAGGCCCACAGGCGCTCCCCGGCACCCAAGGCCGGGTGCTCAGCAACCCCAACGGCGGCACGccc > 2:6088231/1‑149 (MQ=255) aTCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCCAATGCGAAAAGCTGCCGGCGCCACAAGGCCCACTGGCGCTACGCGGCACCGAAGGCCAGGTGCTCAGCAAAGCCAAGTGCTGGACGCCCATcccc > 2:6762344/1‑149 (MQ=255) gCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTg < 1:2147606/150‑1 (MQ=255) ccTGGGCAACCGCATGGCCTGCGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGa < 1:2798590/150‑1 (MQ=255) tGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGAcc < 1:717550/150‑1 (MQ=255) ggCAACCGCATGGCCTACGTGGTCGCGGGCCCCCCGCGGTCGGCCGCAGGCGGACAACTGCCGGCGCCCCAAGGCCCCCCGGCGGTCCGCCGCCCCCCAGGCCGGGTGCGCCGCGACGCCCACTGCGGTTCGCCGAGCCCCGGTGAcccc > 2:1325936/1‑149 (MQ=255) aaCCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAtt < 1:4444501/150‑1 (MQ=255) ccGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt < 1:4434221/150‑1 (MQ=255) gCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCg < 1:5379418/150‑1 (MQ=255) gCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCg < 1:1915310/150‑1 (MQ=255) cgggCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGc < 2:5227178/148‑1 (MQ=255) aTGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGc < 1:2555501/150‑1 (MQ=255) aTGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGc < 1:5978933/150‑1 (MQ=255) aTGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGc < 1:6622673/150‑1 (MQ=255) aTGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGc < 1:2872655/150‑1 (MQ=255) gCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCAc < 2:1158569/150‑1 (MQ=255) gCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCAc < 2:5791769/150‑1 (MQ=255) cTACGTGGTCGCGGGCCCCCAGCTGTCGGCCGAACGCGAACAGCTTCCGGCGCCCGAAGGCCCACTGGCGGTCCGCGGCACCCAAGGCCTGGTGCTCAGCTACGCCAAATGGTGCACGCCCATAACGGGGGACACGATTGTAGGCCAccg > 2:516888/1‑149 (MQ=255) cTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCt < 1:3584429/150‑1 (MQ=255) ggTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggc < 2:413540/150‑1 (MQ=255) ggTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggc < 2:4682080/150‑1 (MQ=255) gTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggcc < 2:229058/150‑1 (MQ=255) gTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggcc < 2:5027696/150‑1 (MQ=255) tCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggccg < 1:2383558/150‑1 (MQ=255) gccgccTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAgg < 2:3987927/150‑1 (MQ=255) ccgccTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAggg < 1:4235708/150‑1 (MQ=255) gccTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCa > 2:1143291/1‑150 (MQ=255) ccTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCAt > 2:2792948/1‑150 (MQ=255) tgctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATgg > 1:1058616/1‑150 (MQ=255) ctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGc > 2:3403156/1‑97 (MQ=255) ctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGc < 1:3403156/97‑1 (MQ=255) tgTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCg > 2:7205/1‑150 (MQ=255) gTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGGGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGt < 1:3238825/150‑1 (MQ=255) tCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTg < 2:2372750/150‑1 (MQ=255) tCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTg < 1:4081975/150‑1 (MQ=255) cGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGc < 1:891796/150‑1 (MQ=255) cGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGc < 2:4566647/150‑1 (MQ=255) cGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGc < 1:5112202/150‑1 (MQ=255) ggCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCa > 1:4304932/1‑150 (MQ=255) gCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCCGCTCCGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGGCGTGCAc > 1:2508632/1‑150 (MQ=255) ccGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCAcc > 1:1395528/1‑150 (MQ=255) cGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCt > 2:109896/1‑150 (MQ=255) cGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCt > 1:2973274/1‑150 (MQ=255) gAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTg < 2:5649080/150‑1 (MQ=255) aGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCATCTACGACAAGTGCTGCACGCCGATCCCGGGTGACCCGATTTTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGga < 2:3832445/150‑1 (MQ=255) aGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGga < 2:6137357/150‑1 (MQ=255) aGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGga < 1:496008/150‑1 (MQ=255) cGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGgagta < 2:1748874/150‑3 (MQ=255) | AGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACT > NC_002947/6055641‑6055938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |