| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,131,953 | C→T | 5.6% | intergenic (+39/+28) | PP_5374 → / ← PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,131,953 | 0 | C | T | 5.6% | 782.2 / 20.6 | 249 | intergenic (+39/+28) | PP_5374/PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (117/117); new base T (3/11); total (121/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.23e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 252 total aligned reads displayed.
GGTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCAC > NC_002947/6131804‑6132100 | ggTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATc < 1:4167283/150‑1 (MQ=255) tGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAg < 2:6830477/150‑1 (MQ=255) cgcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGt > 2:4351588/1‑150 (MQ=255) ccTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCg < 2:118350/150‑1 (MQ=255) ccTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCg < 2:6193622/150‑1 (MQ=255) ccTATACCTGGGATTCACCCGCAAGTCATCACGCCGGTGGCCGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTTACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCt < 1:771439/150‑1 (MQ=255) tataCCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtg > 2:3417748/1‑150 (MQ=255) atcccagggCTTCACCCGCAAGGCAACCCGCCGGTGGCTGGGCCCGTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 1:3650390/144‑1 (MQ=255) ccTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtt > 1:2510303/1‑150 (MQ=255) cTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATAAGCTGTCGGTGTTGTGttt > 1:592940/1‑150 (MQ=255) gggATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTg < 2:4619925/150‑1 (MQ=255) gggATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTg < 2:4259184/150‑1 (MQ=255) gggATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTg < 1:3937798/150‑1 (MQ=255) tCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCGTGTGTTTTGGGCAg > 2:5884061/1‑150 (MQ=255) aCCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGc > 2:18484/1‑150 (MQ=255) aCCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGc > 2:6576777/1‑150 (MQ=255) cccGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCt > 2:6665119/1‑150 (MQ=255) ccGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTGTTGGGCAGGCTa > 2:3461608/1‑150 (MQ=255) cGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTAt > 1:2071657/1‑150 (MQ=255) cGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTAt > 1:3402491/1‑150 (MQ=255) gCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCTAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTAtt < 1:4409764/150‑1 (MQ=255) gCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTAtt > 1:1847950/1‑150 (MQ=255) aaGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTc > 1:535111/1‑150 (MQ=255) aCGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGa > 2:5146563/1‑150 (MQ=255) ccGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAgg < 1:1065356/150‑1 (MQ=255) ggTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCa < 1:268263/150‑1 (MQ=255) ggTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCa < 2:6308951/150‑1 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGc < 1:1789226/150‑1 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGc < 1:1687043/150‑1 (MQ=255) tGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCa < 1:3836476/150‑1 (MQ=255) gggCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCAt < 2:5179748/150‑1 (MQ=255) cccTTGGCCTGCGAGGGGTTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCaa > 2:3874834/1‑150 (MQ=255) cccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCaa < 2:1546794/150‑1 (MQ=255) cccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCaa < 1:6483654/150‑1 (MQ=255) ttGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCa < 2:1730443/150‑1 (MQ=255) ggCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGt < 2:3127873/150‑1 (MQ=255) gCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGtn < 1:1196473/150‑2 (MQ=255) gCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTc < 2:4525026/150‑1 (MQ=255) cTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTGTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTccc > 1:4356189/1‑150 (MQ=255) ggggCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACACCCAACAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCCCCGAAGGCAGGGCCAACAACCACTCCCCGAACa > 1:5761125/1‑150 (MQ=255) gCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGcc < 2:6652264/150‑1 (MQ=255) ttGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGc > 2:3602856/1‑150 (MQ=255) tGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCGTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCa > 1:2677521/1‑150 (MQ=255) tatGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGc < 2:2632516/150‑1 (MQ=255) gggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTc < 1:630917/150‑1 (MQ=255) gggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTc > 2:6811560/1‑150 (MQ=255) gggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCAACAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTATGCACCGAAGGCAGGGCCAACAACCAGTCCCGGAACAGCCCCACCCTTTc > 1:3481708/1‑150 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 1:6665119/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 1:3864050/150‑1 (MQ=255) tGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGa < 2:3036316/150‑1 (MQ=255) tGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCGGTCGGTCGTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCGTTCACGa > 2:164468/1‑150 (MQ=255) gACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAg < 2:5772717/150‑1 (MQ=255) aCAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAgg < 2:4289530/150‑1 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCtt > 1:3896680/1‑71 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGAc > 2:523259/1‑150 (MQ=255) gCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGAcc > 2:3903129/1‑150 (MQ=255) cGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCa > 2:4946479/1‑150 (MQ=255) aagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCACCTGTCGGTCTTGTGTTTTTGGCACGCTATTTCTGCACCGAAGGCAGGGCCATCAAACAGTCCCCGAAAACCCCCAACCTTTCACGAGGACCACg > 1:4178320/1‑150 (MQ=255) aGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCgg < 1:6433617/150‑1 (MQ=255) gCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGt < 2:326559/150‑1 (MQ=255) gCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGt < 2:6521156/150‑1 (MQ=255) cAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTgg > 2:861305/1‑150 (MQ=255) cAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTgg < 1:6105094/150‑1 (MQ=255) cTAAAGCCACCCTGGAAGACCCAAGACCGACAGCCAACAGCAGTCGGGGGTGTGTTTTTGGCAGGCGATTTCTGCACCGAAGGCAGGGCCAACAACCACTCCCCGAACAGCCGCACGCGTTAACCAGGACCACGCTCGGGGGACGACAcc > 1:86481/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:379714/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 1:2151575/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:3682942/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCGTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCCTCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:2609036/1‑150 (MQ=255) tAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCca < 1:480912/150‑1 (MQ=255) aaGCCACCCTGGAAGACACAAGACCAACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCcagc > 2:29629/1‑150 (MQ=255) gAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACtt > 1:5076472/1‑150 (MQ=255) aaGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTg < 1:2366209/150‑1 (MQ=255) aaGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTg < 1:1983264/150‑1 (MQ=255) gACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGc < 1:499283/150‑1 (MQ=255) gACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGc < 2:6035933/150‑1 (MQ=255) gACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGc < 1:6283838/150‑1 (MQ=255) acacAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTggtg > 2:1470536/1‑148 (MQ=255) acaAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTc > 2:1807301/1‑150 (MQ=255) caAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCg < 2:1055828/150‑1 (MQ=255) aaGACCGACAGCTGATGGCTGTCGGTCGTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAACAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTAGGCGTCgg > 1:3571185/1‑150 (MQ=255) aaGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga > 1:5626159/1‑121 (MQ=255) aaGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga < 2:5626159/121‑1 (MQ=255) aaGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCgg > 1:3376604/1‑150 (MQ=255) aaGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCgg > 2:2487740/1‑150 (MQ=255) aGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGt > 2:257205/1‑150 (MQ=255) gACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCg < 2:4465952/147‑1 (MQ=255) gACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCg > 1:4465952/1‑147 (MQ=255) gACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTc > 1:3057438/1‑150 (MQ=255) cGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTgg > 1:672010/1‑150 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:4946479/150‑1 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:4909167/150‑1 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:5831401/150‑1 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:4520656/150‑1 (MQ=255) aCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAg > 1:325463/1‑150 (MQ=255) aGCCATCAGCTGTCGGTCGTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTa > 1:16204/1‑150 (MQ=255) ccATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGATCTTGGCGTCGGTCTGGAGTAcc < 2:4820997/150‑1 (MQ=255) ccATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAcc > 1:4699337/1‑150 (MQ=255) ccATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAcc < 2:414675/150‑1 (MQ=255) ccATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAcc > 1:133786/1‑150 (MQ=255) cATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACca > 1:6874626/1‑150 (MQ=255) | GGTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCAC > NC_002947/6131804‑6132100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |