| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 565,989 | T→A | 5.0% | intergenic (+26/‑138) | katA → / → bfr‑I | catalase/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 565,989 | 0 | T | A | 5.0% | 1202.0 / 30.5 | 353 | intergenic (+26/‑138) | katA/bfr‑I | catalase/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base T (170/164); new base A (11/7); total (181/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 353 total aligned reads displayed.
ATCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCA > NC_002947/565841‑566137 | aTCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTc > 1:6538946/1‑150 (MQ=255)aTCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTc > 2:671581/1‑150 (MQ=255) tCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCa > 1:5713991/1‑150 (MQ=255) tCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCa > 2:3580224/1‑150 (MQ=255) tCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCa > 1:5329752/1‑150 (MQ=255) ccGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCAttt > 2:2607961/1‑150 (MQ=255) cGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTg > 2:3722036/1‑150 (MQ=255) ggTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTgg > 2:6275267/1‑150 (MQ=255) cATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGt > 2:1131999/1‑150 (MQ=255) ggcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGtttt < 1:4814997/150‑1 (MQ=255) ggcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGtttt > 2:767564/1‑150 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAAAACCGCCCAAATGAGGGCGGttcttc < 1:1515303/150‑1 (MQ=255) ggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCaa > 2:1892609/1‑150 (MQ=255) gcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAAt < 2:4649377/150‑1 (MQ=255) gcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAAt < 2:3862589/150‑1 (MQ=255) gTCAGCGAAGATGTCATTCAGCGTCAGATACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGa < 1:6446819/150‑1 (MQ=255) tCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGaa > 1:2294258/1‑150 (MQ=255) aGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAata > 2:104253/1‑150 (MQ=255) gCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAatat > 2:4516500/1‑150 (MQ=255) gAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTgg > 1:2902353/1‑129 (MQ=255) gAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTgg < 2:2902353/129‑1 (MQ=255) gAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAGTATCa > 1:5229005/1‑150 (MQ=255) gAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGttct > 1:630684/1‑135 (MQ=255) tGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCactact < 2:5796029/150‑1 (MQ=255) tCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGt < 2:2294258/150‑1 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGttt > 1:673576/1‑150 (MQ=255) gCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGAttttt < 1:156283/150‑1 (MQ=255) cTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGAtttttt < 1:1153775/150‑1 (MQ=255) tACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTg > 1:4120563/1‑150 (MQ=255) aCAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGc < 2:4033700/150‑1 (MQ=255) cAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATGTTTTGCg > 2:5443638/1‑150 (MQ=255) gTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTc > 2:2956850/1‑150 (MQ=255) tACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCt < 1:2496802/150‑1 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAt > 2:5629519/1‑150 (MQ=255) tcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAtt < 1:6168457/150‑1 (MQ=255) cAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgcgc < 1:2379472/150‑1 (MQ=255) cAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgcgc < 1:2014635/150‑1 (MQ=255) aGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCAGTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGt > 2:3249007/1‑150 (MQ=255) gCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttt < 1:5927842/150‑1 (MQ=255) cGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGtttt < 1:377651/150‑1 (MQ=255) ggATCCGGCTTTCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttttt < 1:1027055/150‑1 (MQ=255) ggATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttttt < 1:6034094/150‑1 (MQ=255) ggATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttttt > 2:6641671/1‑150 (MQ=255) aTCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa < 1:2486427/150‑1 (MQ=255) aTCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa < 1:2936114/150‑1 (MQ=255) aTCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa < 2:3338507/150‑1 (MQ=255) ccGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGt < 1:2221213/150‑1 (MQ=255) ccGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGt < 2:4407087/150‑1 (MQ=255) cGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTg < 2:2175381/150‑1 (MQ=255) gCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGAc < 1:367507/150‑1 (MQ=255) cGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAg < 1:5418638/150‑1 (MQ=255) cGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAg < 2:4236294/150‑1 (MQ=255) gAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaa > 2:5979354/1‑150 (MQ=255) aGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 1:3896495/150‑1 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa > 1:2158512/1‑119 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAg > 1:2738882/1‑150 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAg > 2:4107171/1‑150 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAg > 2:4925162/1‑150 (MQ=255) gATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa < 2:6847480/142‑1 (MQ=255) gATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa > 1:6847480/1‑142 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 2:210721/150‑1 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 1:3066070/150‑1 (MQ=255) cAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTc > 1:3586825/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 1:449722/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca < 2:1952089/150‑1 (MQ=255) aGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcaca > 2:3797879/1‑150 (MQ=255) aGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcaca < 2:1586654/150‑1 (MQ=255) aGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcaca < 2:1321510/150‑1 (MQ=255) tttGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAt > 2:2848927/1‑150 (MQ=255) ggCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTgg < 2:616292/150‑1 (MQ=255) ggCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTgg > 2:5550645/1‑150 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGcct > 2:1379799/1‑148 (MQ=255) tCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATa < 1:1233726/150‑1 (MQ=255) tctcGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACg > 1:5595452/1‑150 (MQ=255) tctcGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGAGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACg > 1:5796863/1‑150 (MQ=255) tcGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtt < 1:4049590/150‑1 (MQ=255) tcGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtt > 1:5092181/1‑150 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt > 2:3693872/1‑150 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt > 2:3494251/1‑150 (MQ=255) ccTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTc < 2:5734162/150‑1 (MQ=255) cTAAGTCGAAGTGATGAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTca > 1:178913/1‑150 (MQ=255) cTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTca > 2:1815600/1‑150 (MQ=255) aGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACAt < 2:6451883/150‑1 (MQ=255) cGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 1:458137/150‑1 (MQ=255) gAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgag > 1:2576825/1‑150 (MQ=255) gATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCa < 1:3879613/150‑1 (MQ=255) aTAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAg > 1:1356720/1‑150 (MQ=255) ttagaagtACGGCGCTGATTTGGGCGGTTTTTCAATTAATATCTCTAGTGTTTTTCCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACGATATACAATAGCTGGTTCACACTTTGTTGCATAGACGTTTTCACATGGAGAATCAgg < 1:6102988/148‑1 (MQ=255) tAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAgg < 1:826856/150‑1 (MQ=255) aagaagAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACGCTATGTGGCATAGACGTTTTCACATGGAGAATCAggg > 1:1106356/1‑150 (MQ=255) aagaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGa < 1:2799965/150‑1 (MQ=255) aaaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGa > 1:944183/4‑150 (MQ=255) aaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGAt > 1:750291/3‑150 (MQ=255) aaCCGCCCTCAGTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGc > 2:6005922/1‑150 (MQ=255) aaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGc > 1:305346/1‑150 (MQ=255) ccGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCGCACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCaa < 2:3137015/150‑1 (MQ=255) cGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 2:5209497/150‑1 (MQ=255) cGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 1:3320533/150‑1 (MQ=255) cccTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGc > 2:1486796/1‑150 (MQ=255) ccTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGcc > 1:1914952/1‑150 (MQ=255) | ATCGCCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCA > NC_002947/565841‑566137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |