| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 565,994 | T→A | 5.2% | intergenic (+31/‑133) | katA → / → bfr‑I | catalase/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 565,994 | 0 | T | A | 5.2% | 1176.6 / 33.4 | 344 | intergenic (+31/‑133) | katA/bfr‑I | catalase/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base T (158/166); new base A (11/7); total (170/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 350 total aligned reads displayed.
CCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCACCCGGA > NC_002947/565845‑566143 | cGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTg > 2:3722036/1‑150 (MQ=255) ggTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTgg < 1:945602/150‑1 (MQ=255) ggTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTgg > 2:6275267/1‑150 (MQ=255) cATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGt < 2:4835251/150‑1 (MQ=255) ggcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCTAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGtttt < 2:1109499/150‑1 (MQ=255) ggcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGtttt > 2:767564/1‑150 (MQ=255) gcgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGttttt < 1:6072790/150‑1 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTc < 1:2175203/150‑1 (MQ=255) cgggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGttcttc < 1:1310728/150‑1 (MQ=255) gggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCa > 2:4625039/1‑150 (MQ=255) gggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCa < 1:6348021/150‑1 (MQ=255) ggcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGATGGGATTGCAAAGGCTTTGGGCATCTATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGttcttctt < 1:295127/150‑3 (MQ=255) gcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAAt < 1:2250514/150‑1 (MQ=255) gcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAAt < 2:3862589/150‑1 (MQ=255) gcgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAAt < 1:4043280/150‑1 (MQ=255) gTCAGCGAAGATGTCATTCAGCGTCAGATACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGa < 1:6446819/150‑1 (MQ=255) cAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAat < 1:2326974/150‑1 (MQ=255) cAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAat < 2:2865251/150‑1 (MQ=255) gCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAatat > 1:4407087/1‑150 (MQ=255) gAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCa > 2:3520599/1‑150 (MQ=255) gATGTCATTCAGCGTCAGCTACAGTACTTCATCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCacta < 2:4402192/150‑1 (MQ=255) gTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTg > 2:2065580/1‑150 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGttt > 2:2643773/1‑150 (MQ=255) cTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑tttttt < 1:1154001/150‑1 (MQ=255) tACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTg > 1:4120563/1‑150 (MQ=255) aCAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGc > 1:4722713/1‑150 (MQ=255) cAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TGTTTTGCg > 2:5443638/1‑150 (MQ=255) aGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGt > 2:2177593/1‑150 (MQ=255) aGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGt > 2:6002831/1‑150 (MQ=255) gTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTc > 2:2956850/1‑150 (MQ=255) tACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAGGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCt > 2:2925903/1‑150 (MQ=255) tACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCt > 2:232381/1‑150 (MQ=255) tACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCt > 1:6848131/1‑150 (MQ=255) aCTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTg > 2:1391429/1‑150 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTTGCGTCTGa > 1:5707703/1‑150 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGAt > 1:4883584/1‑150 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGAt > 2:5629519/1‑150 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGAt > 1:2428125/1‑150 (MQ=255) ttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTgc > 1:322255/1‑150 (MQ=255) cAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTgcgc > 2:1932810/1‑150 (MQ=255) aaGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGcgcg > 1:5262630/1‑150 (MQ=255) aGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCAGTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGt > 2:3249007/1‑150 (MQ=255) cGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGtttt < 1:377651/150‑1 (MQ=255) ggATCCGGCTTTCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGttttt < 1:1027055/150‑1 (MQ=255) ggATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGttttt < 1:2023144/150‑1 (MQ=255) ggATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGttttt > 2:6641671/1‑150 (MQ=255) tACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCAt < 2:4056245/150‑1 (MQ=255) cGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAg < 1:5418638/150‑1 (MQ=255) ggCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa < 2:6076884/150‑1 (MQ=255) gAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaa < 1:1525071/150‑1 (MQ=255) aGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAGGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 1:2925903/150‑1 (MQ=255) aGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 1:3896495/150‑1 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGa < 2:2158512/119‑1 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAg > 1:6203393/1‑150 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTg < 2:6398322/150‑1 (MQ=255) aTTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTg < 2:5972686/150‑1 (MQ=255) ttGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 1:179711/150‑1 (MQ=255) cAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTc > 1:274530/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 1:5993521/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 1:1952089/1‑150 (MQ=255) aaaGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTca > 1:2493095/1‑150 (MQ=255) aGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcaca > 2:3797879/1‑150 (MQ=255) aGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTCcaca < 2:1321755/150‑1 (MQ=255) ttGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAtg < 1:5518812/150‑1 (MQ=255) gggCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAtgtg < 2:1731728/150‑1 (MQ=255) cATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCa > 2:4480917/1‑150 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCAt > 1:5128485/1‑150 (MQ=255) tctcGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGAGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACg > 1:5796863/1‑150 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt > 2:3693872/1‑150 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt < 1:767564/150‑1 (MQ=255) ccTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGATTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTc < 2:5088721/150‑1 (MQ=255) tAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGACTATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTcac > 2:1497881/1‑150 (MQ=255) aGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACAt < 2:6715780/150‑1 (MQ=255) tCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATgg < 1:1445718/150‑1 (MQ=255) cGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 1:2848927/150‑1 (MQ=255) cGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 1:458137/150‑1 (MQ=255) cGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 1:3837367/150‑1 (MQ=255) aaGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgaga < 2:5535232/150‑1 (MQ=255) aaGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgaga < 1:671581/150‑1 (MQ=255) tGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATc < 2:703174/150‑1 (MQ=255) aTAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAg > 1:828976/1‑150 (MQ=255) tAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAgg < 1:3617194/150‑1 (MQ=255) tAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAgg < 2:1824626/150‑1 (MQ=255) tAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAgg < 2:5794081/150‑1 (MQ=255) aagaagAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACGCTATGTGGCATAGACGTTTTCACATGGAGAATCAggg > 1:1106356/1‑150 (MQ=255) aagaagAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAggg > 1:6747398/1‑150 (MQ=255) aagaagAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAggg < 2:4120563/150‑1 (MQ=255) tgaaaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGc > 1:6116922/2‑150 (MQ=255) gaagaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCg > 1:3367551/1‑150 (MQ=255) aaaaCCGCCCAAATGAGGGCGGTTCTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGAAGTTTTCACATGGAGAATCAGGTCGAt > 2:3342077/3‑150 (MQ=255) aaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATg > 1:2529322/2‑150 (MQ=255) aaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGc > 1:305558/1‑150 (MQ=255) ccGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCGCACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCaa < 2:3137015/150‑1 (MQ=255) ccGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCaa < 1:2607961/150‑1 (MQ=255) cGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 2:124709/150‑1 (MQ=255) aTTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgaga < 2:5010735/127‑1 (MQ=255) aTTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgaga > 1:5010968/1‑127 (MQ=255) aTTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCAccc > 1:1708037/1‑150 (MQ=255) aTTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCAccc < 2:5713991/150‑1 (MQ=255) ttGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCACCCgg < 1:3580337/150‑1 (MQ=255) | CCGGTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGA‑TTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGGCCACCCGGA > NC_002947/565845‑566143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |