| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 634,122 | A→T | 7.2% | Q142L (CAG→CTG) | PP_0546 → | sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 634,122 | 0 | A | T | 7.2% | 804.8 / 33.7 | 246 | Q142L (CAG→CTG) | PP_0546 | sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (100/128); new base T (7/11); total (107/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 251 total aligned reads displayed.
GCTGACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGT > NC_002947/633973‑634271 | gctgACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCa > 2:1046802/1‑150 (MQ=255)gctgACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCa < 2:1852854/150‑1 (MQ=255) tgACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAgg > 2:464049/1‑150 (MQ=255) cGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCt < 2:2121822/150‑1 (MQ=255) cGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCt < 2:6422196/150‑1 (MQ=255) gACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑g > 2:1993701/1‑150 (MQ=255) cGCCCGCGGGGTGATCCTCAAGTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCtcgac < 1:3209040/150‑5 (MQ=255) gCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAcc > 2:5248700/1‑150 (MQ=255) cccGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCTCGAcca < 2:2977814/150‑1 (MQ=255) ccGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAccat > 2:3775869/1‑150 (MQ=255) ccGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAccat > 1:6226749/1‑150 (MQ=255) ccGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCTCGAccag > 1:264682/1‑149 (MQ=255) cgcgGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAccatc > 2:5991661/1‑150 (MQ=255) gcgGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCTCGAccagac < 1:1430749/150‑4 (MQ=255) gggTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACcatccatc > 1:352345/1‑150 (MQ=255) ggTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCa < 1:5865680/150‑1 (MQ=255) aTCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAAc > 1:6674903/1‑150 (MQ=255) tCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACg > 2:4770861/1‑150 (MQ=255) ccTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGa < 2:663116/150‑1 (MQ=255) ccTCAAGTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGa < 1:5652675/150‑1 (MQ=255) cTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAg < 2:5479830/150‑1 (MQ=255) cAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCa < 2:4264564/150‑1 (MQ=255) aaTTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCAc > 1:1488909/1‑150 (MQ=255) ttGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACtt < 1:1960559/150‑1 (MQ=255) gCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTcc < 1:4650498/150‑1 (MQ=255) gTCTGTGGCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCTGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGt < 2:30297/150‑1 (MQ=255) tCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTg > 2:1694199/1‑150 (MQ=255) tCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTg > 1:6767014/1‑150 (MQ=255) gTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGcc > 1:2790088/1‑150 (MQ=255) gTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGcc < 2:1667004/150‑1 (MQ=255) gTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGcc < 2:5525954/150‑1 (MQ=255) ccccGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTca > 1:3636450/1‑150 (MQ=255) ccccGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTca > 1:6427571/1‑150 (MQ=255) cgAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCgg < 2:2586546/150‑1 (MQ=255) aGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGc < 2:924414/150‑1 (MQ=255) gcgcAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGAc > 1:1063533/1‑150 (MQ=255) gcgcAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGAc > 1:3838556/1‑150 (MQ=255) gcgcAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGAc < 2:5381024/150‑1 (MQ=255) ttCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCg > 2:842728/1‑150 (MQ=255) ttCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCg < 1:450981/150‑1 (MQ=255) cGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTTGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCTTCCATCAGAACGAGCACTTCCGTGGCGGTCACACCGGGCTGACCTGCTCGGc < 2:4862544/150‑1 (MQ=255) cGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGc < 1:1650274/150‑1 (MQ=255) aGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCa < 2:6226749/150‑1 (MQ=255) gCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAg < 2:4403000/150‑1 (MQ=255) cGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGTCAGc < 2:613060/150‑1 (MQ=255) cGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGc < 2:6287954/150‑1 (MQ=255) gCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCg < 1:5399577/150‑1 (MQ=255) gCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCg < 1:402470/150‑1 (MQ=255) ccGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCgg < 2:1135198/150‑1 (MQ=255) ccGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCgg < 1:2542289/150‑1 (MQ=255) ccGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCgg < 1:4288602/150‑1 (MQ=255) cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGgt < 1:5189044/150‑1 (MQ=255) cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGgt < 1:4881791/150‑1 (MQ=255) cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGgt < 2:4606285/150‑1 (MQ=255) ggCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGgtgt < 2:231132/150‑1 (MQ=255) gCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGtt < 1:6044288/150‑1 (MQ=255) tgtgGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCg > 1:5919879/1‑150 (MQ=255) gCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTTACCTGCTCGGCCAGCCCGGTGTTCGAccc < 1:1590259/150‑1 (MQ=255) gCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGAccc > 2:5960887/1‑150 (MQ=255) ggCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCAt < 2:498301/150‑1 (MQ=255) ggCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCAt < 1:5996267/150‑1 (MQ=255) ggCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCAt < 2:6140225/150‑1 (MQ=255) gcTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGc > 1:4320133/1‑150 (MQ=255) tgaattcaGCGAGGAGCGCGAGGGCAACAATGGCATCGGCACATGTCTGGTCGAGCGCCAGCCGCA‑CACCAACCAACAGAACGAGCACTTCCGTGGCCGTCACACAGGGCTCACCACCAAGCCCAGCCCGCTGTTCCAACCGCATGGCGa > 2:273492/8‑150 (MQ=255) gACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGAc < 2:3955269/150‑1 (MQ=255) tGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctg > 2:588635/1‑150 (MQ=255) ggAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgc < 2:3886775/150‑1 (MQ=255) aGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgctg < 2:243868/150‑1 (MQ=255) aGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgctg > 2:674277/1‑150 (MQ=255) aGGCGCGTGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCgg > 2:1476651/1‑150 (MQ=255) gcgcgcGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTg > 1:1834175/1‑150 (MQ=255) cgcgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTc < 2:3732004/150‑1 (MQ=255) cgcgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTc < 1:4485098/150‑1 (MQ=255) cgcgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTc < 2:6852623/150‑1 (MQ=255) cgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGa < 2:3494714/150‑1 (MQ=255) gAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGTGACCTGCTGGCGGTGCTCGAc < 2:5795181/150‑1 (MQ=255) ggCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACgtg < 2:3462152/150‑1 (MQ=255) aCCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTcc > 2:2665466/1‑150 (MQ=255) aCCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTcc > 2:3140412/1‑150 (MQ=255) cAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctc > 1:4167186/1‑150 (MQ=255) cAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctc > 1:1351899/1‑150 (MQ=255) aaTGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctct > 1:472741/1‑150 (MQ=255) gCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTgcgc > 2:4828257/1‑150 (MQ=255) gCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTgcgc > 1:6544250/1‑150 (MQ=255) gCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCg > 2:4143653/1‑150 (MQ=255) acaTGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGAc < 2:4361700/150‑1 (MQ=255) aTGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGt > 2:2205445/1‑150 (MQ=255) tGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATcgc > 2:6154727/1‑150 (MQ=255) ggTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATcgcg < 2:3357632/150‑1 (MQ=255) ggTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATcgcg > 2:320810/1‑150 (MQ=255) gTCGAGCGCCAGGCGCT‑TACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCgg < 1:2090672/150‑1 (MQ=255) gTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCgg < 2:3311823/150‑1 (MQ=255) gTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCgg < 2:1471366/150‑1 (MQ=255) tCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGc > 1:6252911/1‑150 (MQ=255) gtcaGCGCCTGGCGCTCGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCgg > 1:2541524/4‑150 (MQ=255) tcaGCGCCTGGCGCTCGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGc > 2:1276883/3‑150 (MQ=255) gAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCaa > 2:5627534/1‑150 (MQ=255) aGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCaaa < 2:5160396/150‑1 (MQ=255) gcgcCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAg < 1:2198349/150‑1 (MQ=255) aGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGt < 1:966242/150‑1 (MQ=255) | GCTGACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGT > NC_002947/633973‑634271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |