| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 654,406 | T→G | 5.0% | K114Q (AAG→CAG) | ctpL ← | methyl‑accepting chemotaxis protein CtpL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 654,406 | 0 | T | G | 5.0% | 955.3 / 27.3 | 277 | K114Q (AAG→CAG) | ctpL | methyl‑accepting chemotaxis protein CtpL |
| Reads supporting (aligned to +/- strand): ref base T (148/115); new base G (11/3); total (159/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 283 total aligned reads displayed.
CAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTCGC > NC_002947/654257‑654555 | cAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCtt < 1:6257438/150‑1 (MQ=255) aGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTg > 2:3618639/1‑150 (MQ=255) gggTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGGTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGGGTGTGGGTCGCCGGCCAGCTTGCcggcgg < 2:4300191/150‑1 (MQ=255) ggTGGCGTCGAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCggcggc < 2:6335939/150‑1 (MQ=255) cGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCcagca < 1:4807732/150‑1 (MQ=255) cGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCcagca < 2:1581126/150‑1 (MQ=255) cGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCcagca < 2:4152622/150‑1 (MQ=255) gTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCcagcag > 2:3233360/1‑150 (MQ=255) gTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCcagcag > 1:3511770/1‑150 (MQ=255) tCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGt > 1:3908069/1‑150 (MQ=255) tAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTc > 2:4581393/1‑150 (MQ=255) aGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCg > 1:3354034/1‑150 (MQ=255) cAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGtt < 1:2316407/150‑1 (MQ=255) cAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGtt < 1:4903096/150‑1 (MQ=255) cAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTGGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGtt > 2:2090774/1‑150 (MQ=255) gggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGc < 2:5596201/150‑1 (MQ=255) agcaAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTg > 2:5395938/1‑150 (MQ=255) tAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGcc > 1:5229198/1‑150 (MQ=255) gATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCa < 2:1760897/150‑1 (MQ=255) aTTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTGGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAg > 2:1325827/1‑150 (MQ=255) ggCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCt > 1:6612109/1‑150 (MQ=255) gCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTa > 2:3687496/1‑150 (MQ=255) cTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATc > 1:2894348/1‑150 (MQ=255) cTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATc < 1:4561198/150‑1 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATcc > 2:6753761/1‑150 (MQ=255) ggCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAg < 1:1763275/150‑1 (MQ=255) ggCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAg < 1:4126337/150‑1 (MQ=255) ttGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTg > 2:892851/1‑150 (MQ=255) ttGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTg > 1:1500044/1‑150 (MQ=255) ccACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgggg < 1:6786879/150‑1 (MQ=255) ccACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgggg < 1:2989110/150‑1 (MQ=255) cACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc < 2:3415552/150‑1 (MQ=255) cACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc > 2:100046/1‑150 (MQ=255) cACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc < 1:3976072/150‑1 (MQ=255) cACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGGTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc < 1:2665506/150‑1 (MQ=255) cTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgcgc < 2:1690929/150‑1 (MQ=255) cTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgcgc > 1:3841306/1‑150 (MQ=255) tGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCa > 2:2688811/1‑150 (MQ=255) gTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCaa > 2:4769475/1‑150 (MQ=255) tCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAAc < 2:4747287/150‑1 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg < 1:5828325/150‑1 (MQ=255) gTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGc > 1:3986790/1‑150 (MQ=255) tAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGcc > 2:4951260/1‑150 (MQ=255) tAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGcc > 1:2536157/1‑150 (MQ=255) tAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGcc < 1:2444191/150‑1 (MQ=255) aGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCa < 1:806573/150‑1 (MQ=255) cTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAgn < 1:1271361/150‑2 (MQ=255) tGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGct > 2:5100470/1‑150 (MQ=255) tGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGct < 2:317597/150‑1 (MQ=255) ggCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGctc > 2:3748653/1‑150 (MQ=255) gCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGctct > 2:1078310/1‑150 (MQ=255) ccATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTa > 1:1007557/1‑150 (MQ=255) ccATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTa < 2:3001281/150‑1 (MQ=255) cATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTAc < 2:2477714/150‑1 (MQ=255) aTCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTAcc > 2:5851001/1‑150 (MQ=255) tCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCg > 1:2150140/1‑150 (MQ=255) tGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc < 1:3233360/150‑1 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTg > 2:685560/1‑117 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAg > 2:4469124/1‑150 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAg > 1:3754838/1‑150 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAg > 2:197815/1‑150 (MQ=255) tCGAAGATCGCACCCCGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAg > 2:4866541/1‑150 (MQ=255) cGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGt < 1:4701217/150‑1 (MQ=255) gAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTc > 2:570249/1‑150 (MQ=255) gAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTc > 2:6296790/1‑150 (MQ=255) gTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTCCTCGGCCAGCTCTACCGGCCAGTCCGt > 2:4093164/1‑150 (MQ=255) tCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCa < 1:4585619/150‑1 (MQ=255) gCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGt > 2:6420862/1‑150 (MQ=255) cccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTg > 1:3678147/1‑150 (MQ=255) ccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGc > 2:3574755/1‑150 (MQ=255) ccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGc > 2:1106465/1‑150 (MQ=255) ccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGc > 1:3093977/1‑150 (MQ=255) cccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCg < 2:3501907/150‑1 (MQ=255) tCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGc > 1:4944967/1‑150 (MQ=255) tCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGc > 1:4169285/1‑150 (MQ=255) ccGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCaa < 1:1660319/150‑1 (MQ=255) ccGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCaa < 1:3466490/150‑1 (MQ=255) tGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTc < 2:766042/150‑1 (MQ=255) tGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTc < 1:5569012/150‑1 (MQ=255) tGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTc < 1:1905895/150‑1 (MQ=255) gcagcagcaGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCg > 2:5312162/1‑150 (MQ=255) agcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGcc < 2:239709/150‑1 (MQ=255) gggCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATgg < 2:518114/150‑1 (MQ=255) ttGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGc > 2:6168467/1‑138 (MQ=255) ttGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGc < 1:6168467/138‑1 (MQ=255) tggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGcc > 1:5697979/5‑150 (MQ=255) gccGCCGGCAAGCTGGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTg > 1:4259008/3‑150 (MQ=255) cGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgc > 2:256303/1‑150 (MQ=255) cGCCGGCCAGCGTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgc < 2:18926/150‑1 (MQ=255) cGCCGGCAAGCTGGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgc > 1:5947950/1‑150 (MQ=255) cGCCGGCAAGCTGGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgc > 1:6336167/1‑150 (MQ=255) gCCGGCAAGCTGGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCTGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgcg > 1:5002794/1‑150 (MQ=255) cGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCa > 1:4512236/1‑150 (MQ=255) ggCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAg < 1:709098/150‑1 (MQ=255) gCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAgg < 1:1078310/150‑1 (MQ=255) gCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAgg > 1:5285204/1‑150 (MQ=255) cAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGc < 2:3322017/150‑1 (MQ=255) cTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTc > 1:3611150/1‑150 (MQ=255) cTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTc < 2:2895588/150‑1 (MQ=255) tGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTcgc < 2:1504265/150‑1 (MQ=255) | CAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTCGC > NC_002947/654257‑654555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |