| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 661,508 | C→A | 5.7% | intergenic (+15/+112) | PP_0568 → / ← PP_0569 | hypothetical protein/MATE efflux family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 661,508 | 0 | C | A | 5.7% | 1078.4 / 36.3 | 328 | intergenic (+15/+112) | PP_0568/PP_0569 | hypothetical protein/MATE efflux family protein |
| Reads supporting (aligned to +/- strand): ref base C (150/156); new base A (13/6); total (165/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 332 total aligned reads displayed.
AGCTTTCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCAACCGCCACC > NC_002947/661359‑661657 | aGCTTTCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTc < 1:6367562/150‑1 (MQ=255)aGCTTTCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTc < 2:2961321/150‑1 (MQ=255) cTTTCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGc < 2:3058777/150‑1 (MQ=255) cTTTCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGc < 1:728378/150‑1 (MQ=255) tttCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGcc < 2:3204132/150‑1 (MQ=255) tttCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGcc < 2:5872404/150‑1 (MQ=255) tttCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCAGGTGAGGGCTTCGcc > 2:1650705/1‑150 (MQ=255) tCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCt > 2:643122/1‑150 (MQ=255) aTGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCTATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCa < 1:3774175/150‑1 (MQ=255) aTGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCa < 1:4064263/150‑1 (MQ=255) gACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTAGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCGAAGCCCTCaca < 2:4578320/150‑3 (MQ=255) ccGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTc > 2:2911057/1‑150 (MQ=255) ccGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATATGAGGGCGAAGCCCTCacatg < 1:5312652/150‑5 (MQ=255) gggCTTTGCGTCGCGAGGAGGTTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTcgc < 2:2166567/150‑1 (MQ=255) gggCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTcgc < 2:5497992/150‑1 (MQ=255) gggCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACAGCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTcgc < 1:2000009/150‑1 (MQ=255) gaggagGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCt > 1:3320099/1‑150 (MQ=255) ggaggaTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTcc < 2:2616939/150‑1 (MQ=255) ggaggaTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTcc < 1:1709328/150‑1 (MQ=255) gaggaTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTccc < 1:254537/150‑1 (MQ=255) aggaTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCca < 1:5144868/150‑1 (MQ=255) gaTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCcaca < 2:670340/150‑1 (MQ=255) gaTGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCcaca < 1:592034/150‑1 (MQ=255) tgtgCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGt < 2:3406531/150‑1 (MQ=255) tgtgCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGt < 1:1250493/150‑1 (MQ=255) gtgCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTg > 1:4534216/1‑150 (MQ=255) gAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACcg > 2:4045194/1‑150 (MQ=255) aGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACcgc < 1:6246763/150‑1 (MQ=255) tGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTTGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAg < 2:3530635/150‑1 (MQ=255) ccGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAgg < 2:3698009/150‑1 (MQ=255) ccGCTACATCATCGCCAACCCCAGTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAgg < 2:1033885/150‑1 (MQ=255) cGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGc > 1:1427288/1‑150 (MQ=255) gCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGcc > 2:1274988/1‑150 (MQ=255) tACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGa > 2:5386114/1‑150 (MQ=255) atcatcGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGAccc > 2:5265085/1‑150 (MQ=255) atcatcGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGAccc > 1:4944122/1‑150 (MQ=255) atcGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCt < 2:498895/150‑1 (MQ=255) atcGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCt > 2:1856215/1‑150 (MQ=255) ccAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATcc > 1:3989132/1‑150 (MQ=255) aaCCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCa < 2:1754081/150‑1 (MQ=255) aaCCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCa > 1:891411/1‑150 (MQ=255) cccATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCAtgt < 1:3057210/150‑1 (MQ=255) cccATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCAtgt > 1:3198439/1‑150 (MQ=255) cATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTgg < 1:4390460/150‑1 (MQ=255) cATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTgg < 1:697933/150‑1 (MQ=255) ttCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGa < 2:2368419/150‑1 (MQ=255) gcgggcCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGc < 1:2248860/150‑1 (MQ=255) gcgggcCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGc < 2:81573/150‑1 (MQ=255) ggcCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCtt < 2:3364515/150‑1 (MQ=255) ccTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGc < 1:4190408/150‑1 (MQ=255) cTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTcg > 1:2660447/1‑78 (MQ=255) cTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTcg < 2:2660447/78‑1 (MQ=255) cTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCg > 2:2027655/1‑150 (MQ=255) tGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTcgc < 1:4673368/150‑1 (MQ=255) gcggGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATg < 2:3314171/150‑1 (MQ=255) gCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCaa < 2:5755364/150‑1 (MQ=255) cGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCAGGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCaaa < 2:3887309/150‑1 (MQ=255) gAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAg > 1:6607531/1‑150 (MQ=255) tATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGctttgcgg < 1:416556/150‑8 (MQ=255) agccccTTTGGGACTGTGTATGGCTGTGAGCTTGTGAGGGCTTCGCCATCATTTCGCGACACACGGCCGCTCCCTCAGTGACCGCTAAAGCAGGCCGACCGGCTATCCCATGTGGGAGCGGCATTGCGTCGCGATGGGCCGCAAAGCGGc < 1:5438523/148‑1 (MQ=255) ccccATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGccc < 2:4264332/150‑1 (MQ=255) ccccATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGccc < 2:780904/150‑1 (MQ=255) cccATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGcccc > 2:4929615/1‑150 (MQ=255) cccATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGcccc > 2:6109437/1‑150 (MQ=255) cccATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCATCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGcccc > 1:1076777/1‑150 (MQ=255) ccATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCa > 1:4027332/1‑150 (MQ=255) cATTGGGACTGTGTCTGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCaa < 1:6183497/150‑1 (MQ=255) aTTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAAt > 1:6647859/1‑150 (MQ=255) tGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCa < 1:6109437/150‑1 (MQ=255) ggACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGc < 1:3842453/150‑1 (MQ=255) gACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCg > 2:4466750/1‑150 (MQ=255) aCTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGa < 2:1445818/150‑1 (MQ=255) cTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGac > 2:4361296/1‑150 (MQ=255) tgtgTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGaca > 1:1178837/1‑150 (MQ=255) gtgtATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGacac < 1:476205/150‑1 (MQ=255) tgtATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGAcacc > 1:6508614/1‑150 (MQ=255) tgtATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGAcacc < 2:1087701/150‑1 (MQ=255) tgtATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGAAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGAcacc > 2:4651000/1‑150 (MQ=255) tgggCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCTAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACcaca < 1:5761954/148‑1 (MQ=255) aTGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACcaca < 2:3989132/150‑1 (MQ=255) tGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAg < 1:563431/150‑1 (MQ=255) tGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAg > 2:1511269/1‑150 (MQ=255) tGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAg < 2:6509030/150‑1 (MQ=255) gCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGt < 2:6787588/150‑1 (MQ=255) tgtgAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGtct > 2:2490018/1‑150 (MQ=255) gtgAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGtctc > 1:238841/1‑150 (MQ=255) gCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTctg < 2:555843/150‑1 (MQ=255) cATGTGAGGGCTTTGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTctgc > 1:3813704/1‑150 (MQ=255) cATGTGAGGGCTTCGCCCTCATTTCGCGACACACGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGGCTCTctgc < 1:4625426/150‑1 (MQ=255) cATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTctgc > 2:5048381/1‑150 (MQ=255) cATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTctgc > 2:5929972/1‑150 (MQ=255) tgtgAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTctgctg > 2:6292991/1‑150 (MQ=255) atgAGGGCGAAGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCtgctgc > 1:3237565/2‑150 (MQ=255) tgAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCa > 2:1983765/1‑150 (MQ=255) tgAGGGCGAAGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGtctct > 2:6001859/1‑142 (MQ=255) aGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAACGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCAAc < 1:1877976/150‑1 (MQ=255) gggCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCAAcc > 1:350075/1‑150 (MQ=255) gggCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCAAcc > 2:2756623/1‑150 (MQ=255) ttCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTCTCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCCAAGCGGCCCCAATCAGCGACCCCGCAGGGCTCTCTGCTGCAACCGccc > 2:6339238/1‑149 (MQ=39) cGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCAACCGCCacc < 1:2175715/150‑1 (MQ=255) | AGCTTTCATGACCGGGCTTTGCGTCGCGAGGAGGATGTGCGAGCGGTGGCCCGCTACATCATCGCCAACCCCATTCGGGCGGGCCTCGTGCGGCGGGCTGGCGAGTATCCCCATTGGGACTGTGTATGGCTGTGAGCATGTGAGGGCTTCGCCCTCATTTCGCGACACAAGGCCGCTCCCACAGTGACCGCGAAAGCAGGCCGACCCGCTATCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCCGCAAAGCGGCCCCAATCAGCGACACCACAGGTCTCTCTGCTGCAACCGCCACC > NC_002947/661359‑661657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |