| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 709,998 | T→G | 16.6% | V247G (GTT→GGT) | ribF → | bifunctional riboflavin kinase/FMN adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 709,998 | 0 | T | G | 16.6% | 706.3 / 27.0 | 283 | V247G (GTT→GGT) | ribF | bifunctional riboflavin kinase/FMN adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (23/204); new base G (52/2); total (77/206) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.98e-36 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
CAGAAGCTGGCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCGGCGATC > NC_002947/709850‑710143 | cAGAAGCTGGCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCGtt > 2:1533184/1‑150 (MQ=255) gaGCTGGCGGGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCGTGcc > 1:3901116/2‑150 (MQ=255) aaGCTGGCCCGACAGCTCGGCACACCATCCGCCTACATCCAGCTCAAGCGCCGCCGCGTGCCGCTTTGCGGGGTTTACCTGGCCAGCATCGTTATCGACGGCATAGCTTGGCAGTGTGTAGGGAATTTGTTCGTGCG‑CGCCT‑CCGtttga < 2:5362940/150‑4 (MQ=255) tGGCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTg < 1:3050597/150‑1 (MQ=255) ggCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGa < 2:3461127/150‑1 (MQ=255) ggCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGa < 1:3381299/150‑1 (MQ=255) ggCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGa < 1:2705534/150‑1 (MQ=255) cccGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGGG‑CCCCACCCGTTGcggtgttg > 2:1259352/1‑143 (MQ=255) cccGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATg < 2:1655832/150‑1 (MQ=255) ccGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATgg < 2:1440989/150‑1 (MQ=255) gCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGgc < 1:1636792/150‑1 (MQ=255) gCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGccc < 1:6657076/150‑1 (MQ=255) ggCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCAc < 1:3188067/150‑1 (MQ=255) cccAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGga < 1:6140448/149‑1 (MQ=255) acCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCGTGCCGGGGGTGGGCGCCCCCCCCGGga > 2:6047189/1‑150 (MQ=255) ccAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGgag < 1:1109963/150‑1 (MQ=255) cAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCGGTGCCGGGGTTGGGCGGCCGCCCCgggcgc > 2:3688972/1‑147 (MQ=255) cAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCCGGGCCCGGGTGGGGCGCCCGCCCCAGggga > 1:5543723/1‑150 (MQ=255) cAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCGGGCCGGTGCGTGGGGCCCCCCCCCGgaga > 1:1987373/1‑150 (MQ=255) ccGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTc < 1:4070388/150‑1 (MQ=255) ccGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTc < 1:1518898/150‑1 (MQ=255) cGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCCGTGCCGGGGGTGGGGGCCCGCACCCGGGGAttga > 1:2639180/1‑148 (MQ=255) ccAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCAtc < 2:4339647/150‑1 (MQ=255) cAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCTTGCCCGTGATGGGCGCCCGCACCGGGCGATTCAtct > 2:5626186/1‑150 (MQ=255) aCATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCAtcttc < 1:766095/150‑1 (MQ=255) cATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCAtcttct < 2:4653836/150‑1 (MQ=255) aTCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCGGTTCCGGGGTTGGGGGCCCCCCCCGGGAGATTCATCGTCTg > 2:4089090/1‑150 (MQ=255) tCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGGG‑CCCCC‑CCCGTGCCGGTGATGGGGGGCCCCACCCGGGGGTTAATCGTGTgggaattg > 2:2458681/1‑144 (MQ=255) tCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTg < 1:3304940/150‑1 (MQ=255) tCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCGTGCCGGGGGTGGGGGCCCGCACCGGGGGATTCATATTCTGGGCtttt > 2:421426/1‑149 (MQ=255) aaGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCGGGGCGGTGGTGGGCGCCCGCCCCGGGGGTTTAATCGTATGGACTTTTcc > 2:2941891/1‑150 (MQ=255) cgccgccgcGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGc < 2:2039317/150‑1 (MQ=255) gccgccgcGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGGTGCCGGGGTTGGGCGCCCCCACCGGGGGAGTCAACTTGTGGGCTTTTCCGGCg > 2:1033495/1‑150 (MQ=255) gccgccgcGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCGTTCCGGTGATGGGCGCCCCCACCCGGAGATTAAAATTCTTGACATTTCCGGCg > 1:4498935/1‑150 (MQ=255) ccgccgcGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGa < 2:3837253/150‑1 (MQ=255) ccgcGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCt < 2:5141591/150‑1 (MQ=255) cgcgTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCtt < 2:2688410/150‑1 (MQ=255) cgTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTa < 2:6278412/150‑1 (MQ=255) gTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTAc < 1:120033/150‑1 (MQ=255) gTGCCGCTGTCCGGGGTATACCGGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTAc < 2:2857247/150‑1 (MQ=255) ccGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCGGTGCCGGTGGTGGGCGCCCGCACCGGGAGATTCATATTCTGGACTTTTCCGGCGATATTTAaggc > 2:2827831/1‑150 (MQ=255) cTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTAcggccgg < 1:6735749/150‑1 (MQ=255) cGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCt < 2:773582/150‑1 (MQ=255) ggTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCGGTGCCGGTGATGGGCGCCCGCACCGGGAGGTTCATCTTCTGGACTTTTCCGGCGATCTTTAAGGCCGGCGCCTGAc > 2:6774182/1‑150 (MQ=255) ataCCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGt < 2:3218027/150‑1 (MQ=255) ataCCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGt < 2:3547401/150‑1 (MQ=255) taCCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTg < 1:1329251/150‑1 (MQ=255) ccTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGa < 1:5049185/150‑1 (MQ=255) ccTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGa < 1:1570967/150‑1 (MQ=255) ccTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGa < 1:428951/150‑1 (MQ=255) ccTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGa < 2:6352863/150‑1 (MQ=255) cTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCGCCCCCC‑CCGTGGCCGG‑GGTGGGGGCCCGCCCCGGGGGGGGGCTCTTCGGGGCGTTGGCGGCGGGCGTTTCGGGCGGCGCCGGGCGGTgggg > 2:3114790/1‑148 (MQ=255) cTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAg < 2:4017760/150‑1 (MQ=255) cTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAg < 1:2449879/150‑1 (MQ=255) tGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCCGTGCCGGTGTTGGGCGCCCCCACCAGGAGATTAAAATTCTTGTATTTTGCGGCGATATTTAAGGCCGGCGCCGGACCGTgggct > 1:5640468/1‑147 (MQ=255) ggCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGtt < 1:2160704/150‑1 (MQ=255) ccAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTcc < 1:883855/150‑1 (MQ=255) cAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCCGTGCCGGGGGTGGGGGCCCGCCCCGGGGGGGTCAACGTCGGGGCGTTGGCCGCGATCGTTTCGGCCGGCGCCGGACGgggggggtgca > 2:716960/1‑143 (MQ=255) cAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTcca < 1:3343891/150‑1 (MQ=255) aGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTccac < 2:6648393/150‑1 (MQ=255) aGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTccac < 2:6843745/150‑1 (MQ=255) tCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCC‑CCCGGGCCCGGGATGGGCGCCCCCCCCGGGCGATTGAAATTAAGGCCGTTTCCCGCGCGCGTTTAGGCCCGCGCCCGACGGTGGGGGGACACCACCAGCGGc > 2:2102463/1‑150 (MQ=255) tCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGc < 2:6194967/150‑1 (MQ=255) tCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGc < 1:1851251/150‑1 (MQ=255) tCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGc < 2:2375935/150‑1 (MQ=255) tCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCCTTGCCGGTGGTGGGCGCCCGCACCAGGAGATTCATCTTCTGGACATTTCCGGCGATCTTTACGGCCGGCGCCAGACGGTGGAGTTCCACCCCAAGCTGc > 2:4556047/1‑150 (MQ=255) cAAAGCTTGGCCGGGTGTCGGCTATTTCGGCGTGCG‑CCCGA‑CCGTTGCAGGTGATTGGCGCCCGCAGCTGGAGATTCATCTTCTGGACTTTGACGGCGATCTTTACGGCAGGAGACTGTCGGTGGAGTTCCACCAGAAGCTGCGtgatga < 2:1738375/150‑1 (MQ=255) cAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAaga < 2:5252527/150‑1 (MQ=255) cAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAaga < 1:2095740/150‑1 (MQ=255) aGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGagca < 2:1919505/150‑1 (MQ=255) ccGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTc < 1:4211669/150‑1 (MQ=255) ccGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTc < 2:5955183/150‑1 (MQ=255) gtgtCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCt < 1:3801810/150‑1 (MQ=255) tCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTccc < 1:5831605/150‑1 (MQ=255) ggCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTg < 1:5277813/150‑1 (MQ=255) cAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGa < 1:3768194/150‑1 (MQ=255) cAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGa < 2:6323616/150‑1 (MQ=255) cAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGa < 2:247724/150‑1 (MQ=255) cAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGa < 2:3134265/150‑1 (MQ=255) cAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGAGTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGa < 2:2768073/150‑1 (MQ=255) aaTATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAg < 1:691803/150‑1 (MQ=255) aaTATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAg < 1:972618/150‑1 (MQ=255) aaTATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAg < 1:6551057/150‑1 (MQ=255) atatCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACCAGCTGCGCGAAGAGCAGCGATTCGCCTCCCTGGAgg < 2:5412978/150‑1 (MQ=255) atatCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAgg < 2:4725567/150‑1 (MQ=255) tatCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATATTCTTGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCAGGGAGgc < 1:5817796/150‑1 (MQ=255) cGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCt < 1:6437626/150‑1 (MQ=255) gCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGa < 1:3603130/150‑1 (MQ=255) cGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGaa < 2:4888301/150‑1 (MQ=255) cGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGaa < 2:4360776/150‑1 (MQ=255) cGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGaa < 2:4478553/150‑1 (MQ=255) tGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGt > 1:4643599/1‑150 (MQ=255) cg‑cCCCC‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCg < 1:4340344/150‑1 (MQ=255) g‑cCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCgg < 2:5049886/150‑1 (MQ=255) g‑cCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCgg < 2:136538/150‑1 (MQ=255) cgtcccA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCg < 1:288257/147‑1 (MQ=255) cccA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCGGcg > 2:6483727/1‑150 (MQ=255) ccA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTTGCCTCCCTGGAGGCGCTGAAGTCGGcga < 1:5678623/150‑1 (MQ=255) ccA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCGGcga > 1:1780842/1‑150 (MQ=255) a‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCGGcgatc > 2:4022126/1‑150 (MQ=255) | CAGAAGCTGGCCCGCCAGCTCGGCACACCAACCGCCAACATCCAGCTCAAGCGCCGCCGCGTGCCGCTGTCCGGGGTATACCTGGCCAGCATCGTGATCGACGGCAAAGCTTGGCCGGGTGTCGGCAATATCGGCGTGCG‑CCCCA‑CCGTTGCCGGTGATGGGCGCCCGCACCTGGAGATTCATCTTCTGGACTTTGCCGGCGATCTTTACGGCCGGCGCCTGACGGTGGAGTTCCACCACAAGCTGCGTGAAGAGCAGCGATTCGCCTCCCTGGAGGCGCTGAAGTCGGCGATC > NC_002947/709850‑710143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |