| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 788,584 | C→A | 7.6% | intergenic (+31/‑182) | ettA → / → gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 788,584 | 0 | C | A | 7.6% | 1118.1 / 50.7 | 337 | intergenic (+31/‑182) | ettA/gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (166/145); new base A (15/11); total (181/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 344 total aligned reads displayed.
ACTCGAACGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTG > NC_002947/788435‑788733 | tCGAACGTGGTGTTCTTCGAAGGTAACTACAACGAGTACGAAGACGACCGCAAGAAGCGTCTGGGTGATGCTGATGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGTGGCCCCa > 1:3719088/1‑150 (MQ=255) gtggtgTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGc < 2:3259712/150‑1 (MQ=255) gtgtTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGcccc > 2:6295258/1‑150 (MQ=255) tgtTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCa > 1:1110288/1‑150 (MQ=255) gtTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAt > 1:2318852/1‑150 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCTAGTGGCCCCAttttt < 1:3895016/150‑1 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAttttt < 2:5784967/150‑1 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAttttt > 2:5608119/1‑150 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAttttt > 1:5715777/1‑150 (MQ=255) tcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtg > 2:6568/1‑150 (MQ=255) cGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGTGGCCCCAAGTGGCCCCATTTTtgt < 1:5309061/150‑1 (MQ=255) cGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtgt < 1:5288993/150‑1 (MQ=255) aaGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAACCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGc < 2:4884465/150‑1 (MQ=255) aGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGcc > 1:5986465/1‑150 (MQ=255) gTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTg > 1:3309551/1‑150 (MQ=255) gTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCACTTGGGGCCCCATTCTTGTGcatc < 2:2252927/150‑4 (MQ=39) aaCTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGc > 2:371468/1‑150 (MQ=255) cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCgg > 1:4159363/1‑150 (MQ=255) tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGa > 2:732644/1‑150 (MQ=255) acacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAc < 2:5333262/150‑1 (MQ=255) cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAcc > 2:3066446/1‑150 (MQ=255) cGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCt > 2:4264689/1‑150 (MQ=255) gAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCta < 2:6835086/150‑1 (MQ=255) aGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCtat < 1:814112/150‑1 (MQ=255) aCGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATaaa < 2:4044604/150‑1 (MQ=255) cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt < 1:749691/150‑1 (MQ=255) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATg < 1:6190915/150‑1 (MQ=255) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATg > 1:4612647/1‑150 (MQ=255) aaGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATgg < 2:237984/150‑1 (MQ=255) gCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcg < 1:1825030/150‑1 (MQ=255) ccGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcga < 2:2236238/150‑1 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgagg < 2:801168/150‑1 (MQ=255) gCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGaa < 1:1190115/150‑1 (MQ=255) cAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg < 2:1751792/150‑1 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAgg > 2:4455482/1‑150 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAgg > 2:3465879/1‑150 (MQ=255) agCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTa < 1:5060997/150‑1 (MQ=255) agCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTa < 1:2023584/150‑1 (MQ=255) cGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtt < 1:1340545/150‑1 (MQ=255) tCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCGCAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtttt < 2:2052269/150‑1 (MQ=255) tCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtttt < 1:2628458/150‑1 (MQ=255) tCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtttt < 2:2719690/150‑1 (MQ=255) tGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGt > 2:3590455/1‑150 (MQ=255) gggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGGGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGta < 2:61192/150‑1 (MQ=255) gcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTGTGTATACACTTACATaa > 2:4990166/1‑150 (MQ=255) cccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaa > 1:5880628/1‑150 (MQ=255) ccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa > 2:6163319/1‑150 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtat < 2:4747969/135‑1 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtat > 1:4747969/1‑135 (MQ=255) ccGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCa < 1:2689239/150‑1 (MQ=255) ccGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCa < 2:1561491/150‑1 (MQ=255) gCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCAcc > 2:3043518/1‑150 (MQ=255) cGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaat > 1:6378358/1‑150 (MQ=255) tgtACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTTGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaataa < 2:6715935/150‑1 (MQ=255) tgtACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaataa < 1:1010992/150‑1 (MQ=255) cGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCTAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc > 1:2957242/1‑150 (MQ=255) gCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaa > 1:2833859/1‑150 (MQ=255) tcagaaaaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaa > 2:5166792/6‑150 (MQ=255) acaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaa < 1:3465879/150‑1 (MQ=255) aaGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaa > 2:5397262/1‑150 (MQ=255) aaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCAATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGa < 1:1704261/150‑1 (MQ=255) aCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCATGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGACGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGAc < 1:6096378/150‑1 (MQ=255) cccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTc > 1:1518830/1‑150 (MQ=255) ccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCg > 2:245207/1‑150 (MQ=255) ccAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCg > 2:4661883/1‑150 (MQ=255) aGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCACGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGcc < 1:3935732/150‑1 (MQ=255) gTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGccc < 1:4451761/150‑1 (MQ=255) ccGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTc > 1:1683462/1‑150 (MQ=255) ccGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTc > 1:543482/1‑150 (MQ=255) ggTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTCACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCg < 1:450179/150‑1 (MQ=255) tGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt > 1:3516754/1‑150 (MQ=255) tGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt > 1:3006471/1‑150 (MQ=255) tGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGACCTATTCAGGTGCGAt > 2:4346756/1‑150 (MQ=255) gATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTTTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt < 1:4455519/150‑1 (MQ=255) gATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt < 2:1956251/150‑1 (MQ=255) aTGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCC‑GGCGGACCGCAAAAAATGGCGCGGCCTAGGTGTAATTTTTATACCCTTACATAAAAAGCACCAAATAATTTGAAAAAAAAGGCATTTAGCCCTATTGCGGTGCGATTGc > 1:2392056/1‑150 (MQ=255) ggCACAAAAATGGGGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTGACATAAAACGCACCAGATAATTTCAAAAAAACGACAGTTCGCCCTATTGCGGGGCGATTGc > 1:4942839/2‑150 (MQ=37) acaAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttc > 1:4827483/1‑150 (MQ=255) acaAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttc > 1:5125857/1‑150 (MQ=255) acaAAAATGGGGCCACTTGGGGCCCCATTCTTGTGCATGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttc > 2:2887793/1‑150 (MQ=38) acaAAAATGGGGCCACTTG‑GGGCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACATACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttct > 1:2239614/1‑150 (MQ=255) caAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttct < 1:3066446/150‑1 (MQ=255) aaaaaTGGGGCCACTTGGGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc < 2:5091242/105‑1 (MQ=38) aaaaaTGGGGCCACTTGGGGCCCCATTCTTGTGCATGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt > 2:3369807/4‑150 (MQ=39) aaGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt > 2:1671795/1‑150 (MQ=255) aaGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAGGGTGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt < 1:6848170/150‑1 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTTTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 1:4058242/150‑1 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 2:4933405/150‑1 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 2:1091764/150‑1 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 2:4194648/150‑1 (MQ=255) gAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTgg > 1:2509892/1‑150 (MQ=255) aaaTGGGGCCACTTGGGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTgg > 2:2540409/2‑150 (MQ=255) aaTGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGt > 1:6593450/1‑150 (MQ=255) aaTGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGt < 2:782913/150‑1 (MQ=255) aTGGGGCCCCAAGTGGACCCATTTTTGTGACTGGCGGACAGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTAAAAAAAACGACATTTCGACCTATTCCGGTGCGATTGCTTCTTGGTa > 1:5531453/1‑150 (MQ=255) gggCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACAt > 2:1190621/1‑150 (MQ=255) gCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTc > 2:1371356/1‑150 (MQ=255) ccccAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTcc < 2:4524262/150‑1 (MQ=255) cccAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCt < 1:915980/150‑1 (MQ=255) ccAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTg > 1:1990360/1‑150 (MQ=255) | ACTCGAACGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTG > NC_002947/788435‑788733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |