| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 794,952 | T→A | 5.4% | L364Q (CTG→CAG) | PP_0680 → | ATP‑dependent protease‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 794,952 | 0 | T | A | 5.4% | 1212.2 / 38.2 | 361 | L364Q (CTG→CAG) | PP_0680 | ATP‑dependent protease‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (154/185); new base A (12/8); total (167/194) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
Only 100 of 373 total aligned reads displayed.
TGACGGTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGC > NC_002947/794803‑795101 | cGGTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGAt < 1:4816830/150‑1 (MQ=255) cGGTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCAGaa < 2:4771470/150‑2 (MQ=255) ggggCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTg < 2:5627754/150‑1 (MQ=255) gcgcCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGaa < 1:1984627/150‑1 (MQ=255) cgcCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAg > 2:4433917/1‑150 (MQ=255) gcCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGc < 2:3555881/150‑1 (MQ=255) gtggtgTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACAAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACTGCGGATTCCTGATTCTGGAAGCCgag > 2:338021/1‑150 (MQ=255) tggtgTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCgaga < 1:4941031/150‑1 (MQ=255) tgtTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGaaaa < 1:2759101/150‑1 (MQ=255) ttCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATg < 1:6668985/150‑1 (MQ=255) cGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCt < 1:3522197/150‑1 (MQ=255) cGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCt < 1:6374470/150‑1 (MQ=255) gAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg > 2:3826331/1‑150 (MQ=255) gAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg < 1:6529718/150‑1 (MQ=255) gAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTg > 2:2280031/1‑150 (MQ=255) gCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGa < 2:3670752/150‑1 (MQ=255) gCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGa < 1:2170929/150‑1 (MQ=255) cACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAg > 1:4519599/1‑150 (MQ=255) tATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTa < 1:18365/150‑1 (MQ=255) aTGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTAt < 1:3756522/150‑1 (MQ=255) gACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATgg < 2:4530554/150‑1 (MQ=255) gACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGAGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATTCTGGGTGAGCCGTTAGTATgg > 2:6628438/1‑150 (MQ=255) cAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGa > 1:409664/1‑150 (MQ=255) tttgGCCGTATCGAATACAGCACCGACCTAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTTCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTc < 1:3959171/150‑1 (MQ=255) tttgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTc < 1:4256950/150‑1 (MQ=255) tgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCaa < 1:5716956/150‑1 (MQ=255) tgGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCaa < 2:4987880/150‑1 (MQ=255) gTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACCGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtg > 2:121247/1‑150 (MQ=255) tATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtgc > 2:4504552/1‑150 (MQ=255) aTCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGTTTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAtgcgtgcg < 2:243084/150‑1 (MQ=255) tCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCTAgcgtgcgt > 2:5083666/1‑150 (MQ=255) tCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAgcgtgcgt > 1:1190622/1‑150 (MQ=255) cGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGtt < 1:6167598/150‑1 (MQ=255) gAATACAGCACCGACCAAGGTGTGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg < 1:5943495/150‑1 (MQ=255) gAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTg < 1:5390141/150‑1 (MQ=255) aGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcg > 2:5504571/1‑150 (MQ=255) aGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcg > 1:5294027/1‑150 (MQ=255) gCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcgc < 2:599633/150‑1 (MQ=255) gCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAAGGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTcgc < 2:3904248/150‑1 (MQ=255) cGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCaa < 1:5258768/150‑1 (MQ=255) aCCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGc > 1:2357047/1‑150 (MQ=255) cAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGcgg > 2:1920478/1‑148 (MQ=255) cAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGGTGCAGTCGCGCAAGCTg > 2:6740000/1‑150 (MQ=255) aaGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGa > 1:1522447/1‑150 (MQ=255) aGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTg > 1:2043455/1‑76 (MQ=255) aGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTg < 2:2043455/76‑1 (MQ=255) aGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCACAAGCTGaa < 2:5821048/150‑1 (MQ=255) gTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGa < 1:5983327/150‑1 (MQ=255) tGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGAt < 1:4170463/150‑1 (MQ=255) tGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGAt < 1:2482413/150‑1 (MQ=255) gcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGa < 2:2473190/150‑1 (MQ=255) gcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGa < 1:951079/150‑1 (MQ=255) gcTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGa < 2:1751747/150‑1 (MQ=255) ataCCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGc < 1:115609/150‑1 (MQ=255) taCCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGcc > 1:2559413/1‑150 (MQ=255) cctcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGa < 1:1428786/150‑1 (MQ=255) tcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATc > 2:6799004/1‑150 (MQ=255) tcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATc > 2:3114605/1‑150 (MQ=255) tcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATc > 2:2381437/1‑150 (MQ=255) tcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATc > 1:6231108/1‑150 (MQ=255) tcctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTAGCCGATc > 2:4166056/1‑150 (MQ=255) cctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCg < 2:564781/150‑1 (MQ=255) ctATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCgg > 2:1099740/1‑150 (MQ=255) tATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGt < 1:5087075/150‑1 (MQ=255) tATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGt < 1:2679194/150‑1 (MQ=255) tATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGt < 1:1609444/150‑1 (MQ=255) tCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGa < 2:2527123/150‑1 (MQ=255) tCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGa > 2:2997209/1‑150 (MQ=255) gCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAATCGCCGATCGGTGAGc > 1:3388555/1‑150 (MQ=255) ccAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCt < 1:4038827/150‑1 (MQ=255) cAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTg < 1:3208523/150‑1 (MQ=255) aaCTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTgg > 2:4070412/1‑150 (MQ=255) aaCTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTgg < 2:1484156/150‑1 (MQ=255) aCTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTggg > 1:4480603/1‑150 (MQ=255) aCTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTggg < 2:1655680/150‑1 (MQ=255) tGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGGCGGGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGcc < 1:2880035/150‑1 (MQ=255) tGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGcc < 1:5580623/150‑1 (MQ=255) ccAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGtt > 2:6264577/1‑150 (MQ=255) ccAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGtt < 1:3803163/150‑1 (MQ=255) gcgcgcTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCa < 1:1009806/150‑1 (MQ=255) cTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTc < 2:1030287/150‑1 (MQ=255) cACCGTGCCTACGGCGGCTTCCTGATTCTGGAAGCCGAGAAACTGCTGGGTGAGCCGTTCGTATGGGACGCGCTCTAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGc < 2:5814597/150‑1 (MQ=255) cACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGc < 1:4906976/150‑1 (MQ=255) tGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCa < 2:2875228/150‑1 (MQ=255) ccAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGc > 2:6690605/1‑150 (MQ=255) cAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGcc > 2:3316570/1‑150 (MQ=255) cAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGcc > 1:923509/1‑150 (MQ=255) cggcggCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCa < 1:2466731/150‑1 (MQ=255) ggcggcTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAg < 1:5514158/150‑1 (MQ=255) ggcggcTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAg < 2:928937/150‑1 (MQ=255) tcggcTTCCAGAATCAGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAgg > 2:361474/2‑150 (MQ=255) cggcTTCCAGAATCAGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGt > 2:5292093/1‑150 (MQ=255) ggcTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTCGCCACTGTCAGCCTGCAGCCGCAGGTg > 2:4833591/1‑150 (MQ=255) gcTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTACAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGa < 1:5929391/150‑1 (MQ=255) ttCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGAtt < 2:4035483/150‑1 (MQ=255) ttCCAGAATCAGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGAtt > 2:2646405/1‑150 (MQ=255) ccTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTcc > 1:763032/1‑150 (MQ=255) ccTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTcc > 2:4334823/1‑150 (MQ=255) tGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATTGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGc < 2:697215/150‑1 (MQ=255) tGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGc < 1:5477027/150‑1 (MQ=255) | TGACGGTGGGGCGCCGGTGGTGTTCGAGCCGCACCCGACCTATGACAATTTGTTTGGCCGTATCGAATACAGCACCGACCAAGGTGCGCTGTATACCTCCTATCGCCAACTGCGCCCAGGCGCGCTGCACCGTGCCAACGGCGGCTTCCTGATTCTGGAAGCCGAGAAAATGCTGGGTGAGCCGTTCGTATGGGACGCGCTCAAGCGTGCGTTGCAGTCGCGCAAGCTGAAGATGGAGTCGCCGATCGGTGAGCTGGGCCGTGTTGCCACTGTCAGCCTGCAGCCGCAGGTGATTCCGC > NC_002947/794803‑795101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |