Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 865,406 G→T 5.1% A141A (GCC→GCA upp ← uracil phosphoribosyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947865,4060GT 5.1% 937.5 / 25.2 276A141A (GCC→GCAuppuracil phosphoribosyltransferase
Reads supporting (aligned to +/- strand):  ref base G (132/130);  new base T (8/6);  total (140/136)
Fisher's exact test for biased strand distribution p-value = 7.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 286 total aligned reads displayed.

CCGTGCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCTTGGCCCCCGG  >  NC_002947/865257‑865555
                                                                                                                                                     |                                                                                                                                                      
ccGTGCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGGCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATGTCTTTGCAGCCGGCCTTGTTCAGCGGGTCGTgggtg                                                                                                                                                        >  2:6186698/1‑150 (MQ=255)
 cGTGCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGAtggtgg                                                                                                                                                       <  2:3145570/150‑1 (MQ=255)
   tGCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCa                                                                                                                                                    >  2:4335403/1‑150 (MQ=255)
   tGCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCa                                                                                                                                                    <  1:1562708/150‑1 (MQ=255)
    gCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCaa                                                                                                                                                   <  2:758636/150‑1 (MQ=255)
     cTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAAc                                                                                                                                                  >  1:2312701/1‑150 (MQ=255)
        gTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCAt                                                                                                                                               >  1:2773782/1‑150 (MQ=255)
        gTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCAt                                                                                                                                               >  1:2246428/1‑150 (MQ=255)
         ttCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATc                                                                                                                                              <  1:544296/150‑1 (MQ=255)
           cAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTTGCCACCATCGa                                                                                                                                            <  1:2022468/150‑1 (MQ=255)
           cAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTTGCCACCATCGa                                                                                                                                            <  2:5637345/150‑1 (MQ=255)
           cAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGa                                                                                                                                            <  2:5713567/150‑1 (MQ=255)
             ggCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGCTCGATGGTTGCCACCATCGacc                                                                                                                                          <  2:5540995/150‑3 (MQ=255)
                    gTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGt                                                                                                                                   >  1:18431/1‑150 (MQ=255)
                    gTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGt                                                                                                                                   >  1:5559622/1‑150 (MQ=255)
                       gatcgtGGCGGTGTATATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGc                                                                                                                                <  2:5946654/150‑1 (MQ=255)
                       gatcgaGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGc                                                                                                                                >  1:2463873/1‑150 (MQ=255)
                        atcgaGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGcc                                                                                                                               >  1:736817/1‑150 (MQ=255)
                        atcgaGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGcc                                                                                                                               >  1:4597174/1‑150 (MQ=255)
                            aGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCa                                                                                                                           >  1:2621018/1‑150 (MQ=255)
                            aGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCCCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCa                                                                                                                           >  2:1394654/1‑150 (MQ=255)
                               gggTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCCGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCg                                                                                                                        <  2:5806557/149‑1 (MQ=255)
                                  tttataTCTTCACGTCCGGGTGGGCTTTTCCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGGGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGt                                                                                                                     <  2:1701912/145‑1 (MQ=255)
                                     aGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCga                                                                                                                  >  1:3075490/1‑150 (MQ=255)
                                     aGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCga                                                                                                                  >  2:4944981/1‑150 (MQ=255)
                                     aGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCga                                                                                                                  <  2:2812373/150‑1 (MQ=255)
                                     aGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTCCCGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCga                                                                                                                  <  2:338285/150‑1 (MQ=255)
                                         cTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCgatgat                                                                                                              >  2:6865065/1‑150 (MQ=255)
                                         cTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCgatgat                                                                                                              >  1:960927/1‑150 (MQ=255)
                                         cTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCgatgat                                                                                                              >  1:5046388/1‑150 (MQ=255)
                                           tCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCa                                                                                                            >  1:426133/1‑150 (MQ=255)
                                           tCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCa                                                                                                            >  2:3000422/1‑150 (MQ=255)
                                             aCGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCTGCACAATGGCGCTAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAgg                                                                                                          <  1:6232885/150‑1 (MQ=255)
                                              cGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGTTGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAggg                                                                                                         <  2:5392175/150‑1 (MQ=255)
                                               gTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATc                                                                                                             <  2:6666030/145‑1 (MQ=255)
                                               gTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATc                                                                                                             >  1:6666030/1‑145 (MQ=255)
                                                  cGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAg                                                                                                     <  2:6154811/150‑1 (MQ=255)
                                                    ggTGGGCTTTTTCCACCACCTCGAGGCCTTCGGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCCGCCGGCCTTTTTCCGCCGGTCGATGGGGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGgc                                                                                                   <  1:1072379/150‑1 (MQ=255)
                                                      tGGGCTTTTTCCACCACCTCGTTGCCTTGTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGgcgc                                                                                                 <  2:1493465/150‑1 (MQ=255)
                                                      tGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGgcgc                                                                                                 >  2:4724077/1‑150 (MQ=255)
                                                         gattttcCCACCACCTCGATGCCTTCTGGTGGGGCGACCAGCACCTTGGCGCTAATCTCTTTGCAGCCGGCATTTTCAGCTGGTCTATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGt                                                                                             <  1:4175988/148‑1 (MQ=255)
                                                         gCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTgg                                                                                              >  2:606405/1‑150 (MQ=255)
                                                         gCTTTTCCCACCACCTCGAGGCATTCTGGTGCGGCGACCAGCACCTTGGCGCTAATCTCTTTGCTGCGGGCATTTTTCCGCTGGTCGTTGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTgg                                                                                              <  1:6098809/150‑1 (MQ=255)
                                                           tttttCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGtt                                                                                            <  2:1973190/150‑1 (MQ=255)
                                                                 caccacCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTc                                                                                      >  1:1380286/1‑150 (MQ=255)
                                                                 caccacCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTc                                                                                      >  1:3470317/1‑150 (MQ=255)
                                                                   ccaccTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCg                                                                                    <  2:1092766/150‑1 (MQ=255)
                                                                    caccTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCgg                                                                                   >  1:6846616/1‑150 (MQ=255)
                                                                      ccTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGgcg                                                                                 >  1:4521641/1‑150 (MQ=255)
                                                                       cTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTACCGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGgcgc                                                                                <  1:3378160/150‑1 (MQ=255)
                                                                        tCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGcgcg                                                                               <  2:5522340/150‑1 (MQ=255)
                                                                          gATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAg                                                                             >  1:5938954/1‑150 (MQ=255)
                                                                            tGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCt                                                                           >  2:5167277/1‑150 (MQ=255)
                                                                                ttCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTc                                                                       >  2:1913889/1‑150 (MQ=255)
                                                                                ttCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTGTGCCGCGGGCCTTTTTCCGCCGGTGGAGGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTc                                                                       <  1:1016820/150‑1 (MQ=255)
                                                                                ttCGGGGGCGGCGACCCGCACCAGGGCGCGAATCTCTTTGCCGCCGGCCTTGTGCAGCAGGTCGATGGTGGCACCCAGCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTc                                                                       <  2:6455607/150‑1 (MQ=255)
                                                                                   tGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAg                                                                    <  2:475075/150‑1 (MQ=255)
                                                                                    ggTGCGGCGACCTGCACCTTGGGGCTATTCTCTTTGCCGCCGGCATTTTCCAGCTGTTGTTGGTGGCAAACCATCTCGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGa                                                                   <  1:2842713/150‑1 (MQ=255)
                                                                                             aCCAGCACCATGGCGCTAATCTCTTTCCAGCCGGCCTTTTTCCGCAGGTCGAGGGTGGAAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTgg                                                          <  1:536017/150‑1 (MQ=255)
                                                                                             aCCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCCGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTgg                                                          <  2:2606208/150‑1 (MQ=255)
                                                                                             aCCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTgg                                                          <  2:419726/150‑1 (MQ=255)
                                                                                                 gCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCtt                                                      >  2:1411331/1‑150 (MQ=255)
                                                                                                   aCCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCg                                                    >  1:2170872/1‑150 (MQ=255)
                                                                                                    ccATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGa                                                   >  1:5123213/1‑150 (MQ=255)
                                                                                                    ccATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGa                                                   <  2:3199514/150‑1 (MQ=255)
                                                                                                      ttGGCGCGAATCAGTGTGCCGCCGGCCTTTTTCCGCCGGTCGTGGGGGGCAACCACCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAgg                                                 <  1:3672413/149‑1 (MQ=255)
                                                                                                        ggCGCGAATCTATTTGCAGCCGGCCTTTTTCAGCAGGTCTATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGt                                               <  2:6022572/150‑1 (MQ=255)
                                                                                                             gAATCTCTTGGCAGCCGGCCTTTTTCCGCAGGTGGTTGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTttctt                                          <  1:4856117/150‑1 (MQ=255)
                                                                                                              aaTCTCTTTGCAGCCGGCCTTTCTCAGCAGGTCTATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTttcttc                                         <  2:352687/150‑1 (MQ=255)
                                                                                                                tctgTTGGCAGCCGGCATTTTTCAGCTGTTGGTTGGTGGAAACAATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGt                                       <  1:4906424/150‑1 (MQ=255)
                                                                                                                  tctTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGttt                                     >  1:4011998/1‑150 (MQ=255)
                                                                                                                   ctTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTc                                    >  1:1618588/1‑150 (MQ=255)
                                                                                                                   ctTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGGGGCAACCAGCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTc                                    <  2:841841/150‑1 (MQ=255)
                                                                                                                    tttGCAGCCGGCCTTTTTCCGCAGGTCTAGGGTGGCAACCATCGCGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCg                                   <  2:2463873/150‑1 (MQ=255)
                                                                                                                    tttGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCg                                   >  1:5990333/1‑150 (MQ=255)
                                                                                                                      tGCAGCCGGCCTTTTTCAGCAGGTCGTTGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCggg                                 <  2:1952934/150‑1 (MQ=255)
                                                                                                                      tGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCggg                                 >  2:4451015/1‑150 (MQ=255)
                                                                                                                      tGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAACCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCggg                                 >  1:3172952/1‑150 (MQ=255)
                                                                                                                       gCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGc                                >  2:5258574/1‑150 (MQ=255)
                                                                                                                         aGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCaa                              >  2:4231187/1‑150 (MQ=255)
                                                                                                                         aGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCaa                              <  2:18431/150‑1 (MQ=255)
                                                                                                                         aGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCaa                              >  1:4375330/1‑150 (MQ=255)
                                                                                                                         aGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCaa                              >  1:4439352/1‑150 (MQ=255)
                                                                                                                               ccTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGa                        >  1:3876585/1‑150 (MQ=255)
                                                                                                                               ccTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGa                        <  2:2702854/150‑1 (MQ=255)
                                                                                                                                cTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGAc                       >  2:2712931/1‑150 (MQ=255)
                                                                                                                                 tttttCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACg                      >  1:5223684/1‑150 (MQ=255)
                                                                                                                                 tttttCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACg                      >  2:2343118/1‑150 (MQ=255)
                                                                                                                                    ttCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGgcg                   >  1:2977237/1‑150 (MQ=255)
                                                                                                                                       ggcggctCGATGGTTGCCACCATCGACCTGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTg                >  1:2552765/7‑150 (MQ=255)
                                                                                                                                       agcagGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTg                <  2:5493103/150‑1 (MQ=255)
                                                                                                                                        gcagGTCGAGGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGa               <  2:2163155/150‑1 (MQ=255)
                                                                                                                                         cagGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGAc              <  2:3864961/150‑1 (MQ=255)
                                                                                                                                            gTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCtt           >  1:3321991/1‑150 (MQ=255)
                                                                                                                                            gTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCtt           >  2:1232121/1‑150 (MQ=255)
                                                                                                                                            ctCGATGGTTGCCACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCtt           >  1:3585856/2‑150 (MQ=255)
                                                                                                                                            ctCGATGGTTGCCACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCtt           >  2:3968042/2‑150 (MQ=255)
                                                                                                                                             tCGATGGTTGCCACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGGTTCGGGCAACGCCGACGGCGCTGACCTTg          >  2:4512446/1‑150 (MQ=255)
                                                                                                                                             tCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCTTg          <  2:3470317/150‑1 (MQ=255)
                                                                                                                                                    tggCACCCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCTTGGCCCCCg   <  1:1274573/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CCGTGCTCGTTCAGGCGCTGGTCGATCGAGGCGGTGTAGATCTTCACGTCCGGGTGGGCTTTTTCCACCACCTCGATGCCTTCTGGTGCGGCGACCAGCACCATGGCGCGAATCTCTTTGCAGCCGGCCTTTTTCAGCAGGTCGATGGTGGCAACCATCGAGCCGCCGGTGGCCAGCATCGGGTCGATGATCAGGGCCAGGCGCTGGTTGATGTCCGGCGCGAGCTTTTCCAGATAGGTGTGGGCTTCGAGGGTTTCTTCGTTTCGGGCAACGCCGACGGCGCTGACCTTGGCCCCCGG  >  NC_002947/865257‑865555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: