| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,999 | T→C | 5.7% | intergenic (+94/+83) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,999 | 0 | T | C | 5.7% | 813.4 / 23.9 | 289 | intergenic (+94/+83) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (116/134); new base C (12/3); total (144/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.51e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.57e-01 | |||||||||||
Only 100 of 290 total aligned reads displayed.
CGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTG > NC_002947/867851‑868148 | ctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctctgcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAag > 2:5516891‑M1/79‑150 (MQ=255) cAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCcgctccc < 2:316789/150‑5 (MQ=255) aaggCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAaga < 2:4253165/147‑1 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAaga < 2:1443460/150‑1 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACACGAGTCGCGCCCCACCAGCCGGCCATACCCAACCAGTGGGAGCCGGCCAGCCCCCGAaga > 1:6153660/1‑150 (MQ=255) ccccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCGGTGGGAGCGGGCATGCCCGCGAAGAGGGc > 2:2760572/1‑150 (MQ=255) ccccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGc < 2:2793594/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTAGCGCCCCACCAGCGGGCCTTACCGAACCGGTGGGAGCGGGCAAGCCCGCGAAGAGGGCGGTACAGGCTg > 2:2728219/1‑150 (MQ=39) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:2650462/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGGGGCTGCTCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 2:4537864/150‑1 (MQ=255) cGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGCGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGAt < 1:1028868/150‑1 (MQ=255) gagaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATc < 2:3271226/150‑1 (MQ=255) tcatcTATAACGCCCGGGGCTTATCTGTAGCCAGTGCCGGCCTCTTCGGGGGCGCGCCCGCTCCCACAGGAGGCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 1:1187524/150‑1 (MQ=39) tcatcGATAACGCCCGGGGCTGATCTGTAGCCAGTGCCGGCCTCGACGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 1:1477346/150‑1 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:3895848/150‑1 (MQ=255) atcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAATACCGAACCTGTGGGAGCGGGCCTGCCCGCGAACAGGGCGGTACAGGCAGATCAAgcg‑c > 2:2698166/1‑150 (MQ=255) cGATAAAGCCGGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCa < 2:2348366/150‑1 (MQ=255) gATAAAGCCGGTGGCTTATATGTAGCCAGTGCCGGCCTGTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCCCCGGCGGGCATTACCGAACCTGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAg < 1:2397111/150‑1 (MQ=38) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAg < 2:4806926/150‑1 (MQ=255) gATAAAGCCCGTGGCTGATCTGGAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAg < 2:4114872/150‑1 (MQ=255) tAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑c < 2:6759807/150‑1 (MQ=255) aGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGGGTCGCGCCGCACCTGCGGGCCTTACCGAACCGGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑caca > 2:1662833/1‑150 (MQ=255) ccggTGGCTGATCTGGAGCCCGGGCCGGCCTCTCCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACaaa < 1:3087299/147‑1 (MQ=39) ccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACaaaa < 2:3035270/150‑1 (MQ=255) gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACaaaaaa < 2:825855/150‑1 (MQ=255) gCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGc < 2:6296276/150‑1 (MQ=255) taacTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCCCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGcccc < 1:1577536/147‑1 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAggg < 2:562233/150‑1 (MQ=255) gTAGCCAGTGCCGGCCTCTTAGCGGGCGCCCCCCCGCCCCCCCGGGTGCCCCCCCAACAGCGGGCCATACCCAACCGGGGGGCGCGGGCCAGCCCCCGCAGAGGGCGGGAACCGCGGCTCAAGCGCCCCGGCCACAAAAACCCCCCCggg > 2:5726530/1‑148 (MQ=255) aGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGc < 2:1565039/150‑1 (MQ=255) aGCCAGTGCCGGCCTCGTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGc < 2:5549424/150‑1 (MQ=255) aGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGCGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCTCGGGGCGttt < 2:5065733/150‑1 (MQ=255) ggCCGGCCTCTGCGCGGGCGCGCCCGCTCCCACCGGTGGCGCGCCGCACCTGCGGGCATCACCGCCCCTGTGGGCGCGGGATGGCCCGCGACGTGGGCGGTACAGGCTTATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGttttt < 1:3484117/149‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCTCGGGGCGtttttt < 1:3969320/150‑2 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCTAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGtt < 2:6080866/150‑1 (MQ=255) ccTCTTCGCGGGCGCGCCCGCACCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CAAAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 1:2093895/150‑1 (MQ=255) ctctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc < 2:3347807/150‑1 (MQ=255) ctctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc > 2:6614716/1‑150 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGAATTACCGAACCCGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCa < 1:4498756/150‑1 (MQ=255) cttcgcgggcatgcccgctcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcGCGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAg > 2:5516948‑M2/73‑150 (MQ=255) gcgGGCGCGCCCGCCCCCACAGGTGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGATGAGGGCGGTACAGGCTGATCATGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCg < 1:4349074/150‑1 (MQ=255) gcgGGCGCGCCCGCACCCCCCGGAGTCGCGCCGCACCTGCGGGCATTACCCAACGTGTGGGCGGGGGATTGCCCGCGATGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCg < 1:6490798/150‑1 (MQ=255) cgGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCgg < 2:1063582/150‑1 (MQ=255) acccgctcccccaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCAGCTTAAGc < 2:2364922‑M2/90‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc > 1:6667279‑M1/1‑150 (MQ=255) ccgctcccccaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcGCGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 1:970272‑M2/75‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGt < 2:2955308‑M1/150‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGt < 1:2345247‑M1/150‑1 (MQ=255) CGCTCCCACCGGAGTCGCGCCGCACAGGCGGGCATTACCGAACCTGTGGGAGCGGGCAGGCCCGCGAAGAGGGCGGTACAGGCTGATCACGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 1:3768076‑M1/1‑150 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAGTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 2:1712474‑M1/1‑150 (MQ=255) gctcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcGCGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGGAg > 2:6207086‑M2/57‑150 (MQ=255) cacaggttcggtaatgcccgcaggtgcggcgcgactccgaacctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg > 2:973334‑M2/57‑150 (MQ=255) GCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTCTTTGCGTTTCAGACCGGCTTAAGCGTAg < 2:4869469‑M1/150‑1 (MQ=255) cTCCCCCCGGAGTCGCGCCCCCCGCGGGGGCATGCCCTACCGCGGGTGCGCGGGCATGCCCGCGAAGAGGGCGGTACTGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGt < 1:2358202/150‑1 (MQ=255) tcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcGCGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGttttt < 1:5489527‑M2/69‑1 (MQ=255) CCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGCACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCGAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGc > 2:6374256‑M1/1‑150 (MQ=255) ccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt > 2:1914976‑M2/53‑150 (MQ=255) ccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt > 2:4694472‑M2/53‑150 (MQ=255) ccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt > 2:3552840‑M2/53‑150 (MQ=255) ccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt > 2:1245678‑M2/53‑150 (MQ=255) ccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt > 2:4299008‑M2/53‑150 (MQ=255) CCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt < 2:1355752‑M1/150‑1 (MQ=255) CCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt < 2:4420528‑M1/150‑1 (MQ=255) CCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCt < 1:4605785‑M1/150‑1 (MQ=255) cacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 2:394022‑M2/52‑150 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGGAGTGCtt < 1:1927486‑M1/150‑1 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGGCGGGACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:6670672‑M1/150‑1 (MQ=255) accggAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 1:2034474/147‑1 (MQ=255) acaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg > 1:4806320‑M2/51‑150 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 2:2981303‑M1/150‑1 (MQ=255) gTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGgccgcc > 2:5896101/1‑150 (MQ=255) tCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg > 1:3017720/1‑150 (MQ=255) gcgcCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg > 2:524231/1‑150 (MQ=255) gcgcCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTGTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg > 2:25502/1‑150 (MQ=255) ccaacgCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctc > 2:2026865/6‑150 (MQ=255) ccaacgCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctc > 2:5492362/6‑150 (MQ=255) cACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctc > 2:5442549/1‑150 (MQ=255) cTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct < 1:5546291/150‑1 (MQ=255) gggCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCa < 2:735180/150‑1 (MQ=255) ggCATTACCGAACCTGTGGGAGCGGGCTTGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAg < 1:1003598/150‑1 (MQ=255) aTTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTc > 2:2110073/1‑150 (MQ=255) ttACCGAACCTGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTcc < 1:4674651/150‑1 (MQ=255) tcccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCa < 1:5284488/148‑1 (MQ=255) cGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAggg > 1:3797568/1‑150 (MQ=255) gAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGc > 1:5653109/1‑150 (MQ=255) ccctgggggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAACAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCcg < 1:6277496‑M2/134‑1 (MQ=255) cctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCcgc < 1:2790953‑M2/135‑1 (MQ=255) tgtgggcgcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgt < 1:800847‑M2/137‑1 (MQ=255) ctcttcgcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtc > 1:6777493‑M2/13‑150 (MQ=255) tgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtcg > 2:5280669‑M2/12‑150 (MQ=255) gggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtcgt > 1:6364651‑M2/11‑150 (MQ=255) ttcgcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGtt > 2:1802302‑M2/10‑150 (MQ=255) ggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACaaa > 1:5315000‑M2/10‑56 (MQ=255) gagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTa > 1:1785498‑M2/9‑150 (MQ=255) agcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAt > 1:5115551‑M2/8‑150 (MQ=255) gcgggcAGGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATc < 1:3312073‑M2/144‑1 (MQ=255) gggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCgg > 1:2746842‑M2/5‑150 (MQ=255) gggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCgg > 1:4033082‑M2/5‑150 (MQ=255) gcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCa > 1:58103‑M2/3‑150 (MQ=255) tGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTg > 1:1394169/1‑150 (MQ=255) | CGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCG‑CCAGG‑CACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTG > NC_002947/867851‑868148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |