BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	874,543	A→G	5.3%	E40G (GAA→GGA) ‡	PP_0759 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	874,543	0	A	G	5.3%	914.5 / 24.0	280	E40G (GAA→GGA) ‡	PP_0759	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (123/142); new base G (9/6); total (132/148)
Fisher's exact test for biased strand distribution p-value = 4.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01

Only 100 of 285 total aligned reads displayed.

CACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCATTGCCA  >  NC_002947/874396‑874692

cACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAAc                                                                                                                                                     >  2:263135/1‑150 (MQ=255)

   tGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGcc                                                                                                                                                  <  1:5240826/150‑1 (MQ=255)

      cGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTTCGACGCCAAc                                                                                                                                               <  2:800657/150‑1 (MQ=255)

       gACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTTCGACGCCAACa                                                                                                                                              <  1:4568342/150‑1 (MQ=255)

         cTCGGCCTCGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTGGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGt                                                                                                                                            <  1:4107940/150‑1 (MQ=255)

                tAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGtt                                                                                                                                     >  1:6286896/1‑150 (MQ=255)

                tAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGtt                                                                                                                                     >  1:1954996/1‑150 (MQ=255)

                      ccGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCAt                                                                                                                               <  1:3090045/149‑1 (MQ=255)

                           gcATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGctct                                                                                                                          >  2:4778817/1‑150 (MQ=255)

                            cATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCtctc                                                                                                                         <  1:3860180/150‑1 (MQ=255)

                              tgtgGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGa                                                                                                                       <  2:4374605/150‑1 (MQ=255)

                                  gATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGa                                                                                                                   <  1:3673440/150‑1 (MQ=255)

                                     aGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGa                                                                                                                <  1:2415746/150‑1 (MQ=255)

                                     aGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGa                                                                                                                >  1:1400381/1‑150 (MQ=255)

                                      gggAGTGTTTTCATGCGTGAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                               <  2:1315418/150‑1 (MQ=255)

                                      gggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                               >  2:2722569/1‑150 (MQ=255)

                                      gggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                               >  2:2690660/1‑150 (MQ=255)

                                      gggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAg                                                                                                               >  1:1923038/1‑150 (MQ=255)

                                       ggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAgg                                                                                                              <  2:2084663/150‑1 (MQ=255)

                                       ggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAgg                                                                                                              <  2:1546007/150‑1 (MQ=255)

                                       ggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAgg                                                                                                              >  1:6731483/1‑150 (MQ=255)

                                       ggAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAgg                                                                                                              >  1:1012462/1‑150 (MQ=255)

                                          gtgtTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCa                                                                                                           >  1:5342565/1‑150 (MQ=255)

                                            gtTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAAc                                                                                                         <  2:3153833/150‑1 (MQ=255)

                                                tCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGa                                                                                                     <  1:5843599/150‑1 (MQ=255)

                                                tCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGa                                                                                                     <  2:6109962/150‑1 (MQ=255)

                                                  aTGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATg                                                                                                   <  2:5889688/150‑1 (MQ=255)

                                                  aTGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTCGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATg                                                                                                   >  1:1216788/1‑150 (MQ=255)

                                                    gCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTa                                                                                                 >  1:4796792/1‑150 (MQ=255)

                                                     cGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAc                                                                                                >  1:4690698/1‑150 (MQ=255)

                                                      gTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcg                                                                                               >  1:2124183/1‑150 (MQ=255)

                                                       tAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcgc                                                                                              <  1:5658674/150‑1 (MQ=255)

                                                       tAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTAcgc                                                                                              <  1:6419693/150‑1 (MQ=255)

                                                         aGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACgcgc                                                                                            >  1:4298568/1‑150 (MQ=255)

                                                          gTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCa                                                                                           <  1:4479758/150‑1 (MQ=255)

                                                          gTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCa                                                                                           <  1:2053633/150‑1 (MQ=255)

                                                          gTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCa                                                                                           <  1:5964348/150‑1 (MQ=255)

                                                           tCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAg                                                                                          >  2:4000295/1‑150 (MQ=255)

                                                             ttttGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTc                                                                                        >  1:2903113/1‑150 (MQ=255)

                                                                tGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTa                                                                                     >  1:6652380/1‑150 (MQ=255)

                                                                     tcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcagc                                                                                >  2:2193571/1‑150 (MQ=255)

                                                                     tcaGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcagc                                                                                >  2:5685558/1‑150 (MQ=255)

                                                                      caGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcagca                                                                               <  2:6364222/150‑1 (MQ=255)

                                                                           tgctgAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGAccc                                                                          >  1:3571088/1‑150 (MQ=255)

                                                                              tgAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTgg                                                                       <  2:5499379/150‑1 (MQ=255)

                                                                              tgAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTgg                                                                       >  2:1537753/1‑150 (MQ=255)

                                                                              tgAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTgg                                                                       <  1:6188189/150‑1 (MQ=255)

                                                                                aGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGt                                                                     <  2:5758891/150‑1 (MQ=255)

                                                                                aGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGt                                                                     <  1:4513155/150‑1 (MQ=255)

                                                                                  tGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGa                                                                   <  2:376886/150‑1 (MQ=255)

                                                                                   gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                                  <  1:3155356/150‑1 (MQ=255)

                                                                                   gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                                  <  1:1521504/150‑1 (MQ=255)

                                                                                   gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                                  <  2:5096578/150‑1 (MQ=255)

                                                                                   gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                                  <  1:2700099/150‑1 (MQ=255)

                                                                                   gCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGaa                                                                  <  1:2625158/150‑1 (MQ=255)

                                                                                    cTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAg                                                                 <  1:4368924/150‑1 (MQ=255)

                                                                                    cTGGCAGCCGGCCAGCAGGATGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAg                                                                 >  2:4918203/1‑150 (MQ=255)

                                                                                     tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACCTGGTCAGCATGCTCTCGACCGAGGAGGTCCACCAGTGGTACGCGCAGTCGTAGCAGCGGCCGCTGGGTGTAGc                                                                >  2:6575737/1‑150 (MQ=255)

                                                                                     tGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACACCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGc                                                                >  1:2563978/1‑150 (MQ=255)

                                                                                        cATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATc                                                             <  1:2276574/150‑1 (MQ=255)

                                                                                        cATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATc                                                             <  1:2396070/150‑1 (MQ=255)

                                                                                        cATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATc                                                             <  1:169941/150‑1 (MQ=255)

                                                                                        cATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATc                                                             <  2:2298819/150‑1 (MQ=255)

                                                                                          tCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGa                                                           <  1:3042514/150‑1 (MQ=255)

                                                                                               ctgGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAg                                                      <  1:5283914/150‑1 (MQ=255)

                                                                                                tgGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAgg                                                     >  2:2576594/1‑150 (MQ=255)

                                                                                                  gCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGgt                                                   <  2:4686486/150‑1 (MQ=255)

                                                                                                    cGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGgtgt                                                 >  2:3820342/1‑150 (MQ=255)

                                                                                                         gCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCg                                            >  1:513865/1‑150 (MQ=255)

                                                                                                          ccAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGa                                           <  2:1216788/150‑1 (MQ=255)

                                                                                                            aGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACa                                         >  1:1169783/1‑150 (MQ=255)

                                                                                                             ggCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACaa                                        >  2:3316649/1‑150 (MQ=255)

                                                                                                             ggCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACaa                                        <  2:6780883/150‑1 (MQ=255)

                                                                                                             ggCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACaa                                        <  2:1830818/150‑1 (MQ=255)

                                                                                                             ggCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACaa                                        <  1:3936640/150‑1 (MQ=255)

                                                                                                              gCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAg                                       >  2:1112301/1‑150 (MQ=255)

                                                                                                                  tGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCa                                   <  1:5521858/150‑1 (MQ=255)

                                                                                                                   gAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAg                                  >  1:4246166/1‑150 (MQ=255)

                                                                                                                   gAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAg                                  >  2:4154541/1‑150 (MQ=255)

                                                                                                                       accaccAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGcc                              <  1:1132508/150‑1 (MQ=255)

                                                                                                                       accaccAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGcc                              <  2:2243463/150‑1 (MQ=255)

                                                                                                                       accaccAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGcc                              <  2:3435366/150‑1 (MQ=255)

                                                                                                                         caccaGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGCTGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGGGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGa                            >  1:3382106/1‑150 (MQ=255)

                                                                                                                         caccaGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACACGTCCAGCGCCGa                            >  2:6131261/1‑150 (MQ=255)

                                                                                                                         caccaGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGa                            <  1:913557/150‑1 (MQ=255)

                                                                                                                         caccaGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGa                            >  1:6579406/1‑150 (MQ=255)

                                                                                                                           ccaGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGTGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATg                          >  2:4565384/1‑150 (MQ=255)

                                                                                                                                  cggTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCg                   >  1:2158766/1‑150 (MQ=255)

                                                                                                                                     tacTGTTGGCGTTCGACGCCAACAGCACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCgtgt                >  2:2402927/3‑150 (MQ=255)

                                                                                                                                      gCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGtgtg               <  2:2158766/150‑1 (MQ=255)

                                                                                                                                        tGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcagcag                                                                              <  1:5997089/85‑1 (MQ=255)

                                                                                                                                        tGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATcagcag                                                                              >  2:5997089/1‑85 (MQ=255)

                                                                                                                                        tGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCa             >  2:1035548/1‑150 (MQ=255)

                                                                                                                                         gTTGGCGTTCGACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCCGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAg            >  1:3218116/1‑150 (MQ=255)

                                                                                                                                          ttGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAgg           <  1:5406994/150‑1 (MQ=255)

                                                                                                                                          ttGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAgg           >  1:577307/1‑150 (MQ=255)

                                                                                                                                           tGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGc          >  2:6614640/1‑150 (MQ=255)

                                                                                                                                               gTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCAtt      >  1:749583/1‑150 (MQ=255)

                                                                                                                                               gTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCAtt      >  2:4443222/1‑150 (MQ=255)

                                                                                                                                                   aaCGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCATTGCCa  >  2:5230472/1‑150 (MQ=255)

CACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGCTGCCAGGCGGTGAATACCACCAGCGGCGGTGCTGTTGGCGTCGAACGCCAACAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCGCAGTCGTATCAGCAGACCCTGGGTGAAGCATCGAGCAAGGGTGTGCTCGACAAGTCCAGCGCCGATGCCAAGCGTGTGCAGGCCATTGCCA  >  NC_002947/874396‑874692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`