| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 97,592 | G→T | 6.4% | intergenic (+21/+15) | PP_0090 → / ← PP_0091 | hypothetical protein/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 97,592 | 0 | G | T | 6.4% | 532.4 / 12.4 | 212 | intergenic (+21/+15) | PP_0090/PP_0091 | hypothetical protein/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (115/73); new base T (3/16); total (120/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 214 total aligned reads displayed.
AGGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAA > NC_002947/97444‑97741 | aGGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGa < 2:873652/150‑1 (MQ=255)aGGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGa < 2:2276145/150‑1 (MQ=255)aGGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGa > 2:3890820/1‑150 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAagc > 1:84375/1‑150 (MQ=255) ccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagca < 2:6685234/150‑1 (MQ=255) cAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGcagcag > 1:1131432/1‑150 (MQ=255) cAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcag > 1:6504249/1‑150 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcagc > 2:2775615/1‑150 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcagc < 2:5022422/150‑1 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcagc < 2:6599228/150‑1 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAagcacc > 1:3078665/1‑148 (MQ=255) tttCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCcacc > 1:1569306/1‑149 (MQ=255) gttCGTCCTACCCGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACCTGGTCGTCGGGCCCTGCGAGGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCTTCGCAGccccggg < 2:5325409/149‑4 (MQ=255) ttCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGACCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCacac > 2:3528815/1‑150 (MQ=255) tCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCAc > 2:3010205/1‑150 (MQ=255) acacGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGa > 1:250300/1‑150 (MQ=255) gCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGGGCGAAGCAGCCCCACACTCACGGGCTGcc > 1:791338/1‑149 (MQ=255) tGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGa > 1:6235400/1‑150 (MQ=255) ggAGATCGTGCCCAACAGCGTGGACAAGCACCAGAACTTGGTCGTCGGGACCGGGGATGGCGGCACGAAGAAGATCATCTATCAGAAGAACCATCGATAAGCAACTGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGaa < 2:1471043/150‑1 (MQ=255) ggAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGaa > 2:1602184/1‑150 (MQ=255) gagaTCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGaaa > 1:4257989/1‑149 (MQ=255) aTCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGCTGCAGAACACt > 2:3517283/1‑150 (MQ=255) tCGTGCCCAACAGCGAGGTCAAGGACCAGAACTTGGTCGTGGGGACCTGCGTGGGGGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACtt < 1:1672426/150‑1 (MQ=255) tCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACtt > 2:5561250/1‑150 (MQ=255) gTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCg > 2:3075460/1‑150 (MQ=255) gTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACGCACCGGATGCAGAACACTTCg > 1:5625630/1‑150 (MQ=255) cccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTa > 2:3347806/1‑150 (MQ=255) cccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACGTCGCTa > 1:6041418/1‑150 (MQ=255) ccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAg > 2:5808060/1‑150 (MQ=255) cAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAgg > 2:6141607/1‑150 (MQ=255) cAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACGTCGCTAgg > 1:6653990/1‑150 (MQ=255) gAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCAGCGAAGCAGCCCCACACACAACGGAAGCATAACACATCGCAAGGCTCGTTc > 1:4440925/1‑150 (MQ=255) ggTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAACGGGTGCAGAACACATAGCGAGGCGCGTTcac > 1:1805781/1‑150 (MQ=255) gTCAAGGACCAGACCATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcacc < 2:5133633/150‑1 (MQ=255) gTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAGGCTCGTTcacc > 1:2834058/1‑150 (MQ=255) tCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACGGGATGCAGAACACATCGCTAGGCTCGTTcacca > 1:2089792/1‑150 (MQ=255) cacggACCAGACCTTGGTCGTGGGGACGTGCGTTGGGGGGACTAAGAATATCATCTATCAGAAGAACGTTCGATCAGCATCCGGGCCGGGGGCGGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccac < 2:709323/147‑1 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 2:2211769/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCGCGTTcaccacc > 2:646603/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACAAATCGCGAGGCTCGTTaaccacc > 1:369949/1‑150 (MQ=255) ggACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTAACGGGATGCAGAAAACTTAGCTAGGCTAGTTaaccaccaa > 2:23243/1‑149 (MQ=255) ggACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACGCACGGGCTGCAGAACACATCGCTAGGCTCGTTcaccaccac > 2:3039912/1‑150 (MQ=255) gACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCAAGGGATGCAGAACACTTCGCTAGGGTCGTTCaccaccacc > 1:2134632/1‑150 (MQ=255) gACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACCTCGCAAGGCTCGTTCaacaccacc > 1:4306273/1‑150 (MQ=255) aCCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCACCCCCACACAAAACGGTTGCAGAACACATAGCGAGGCGCGTTAACCACAACCt > 1:1995494/1‑150 (MQ=255) ccAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCtt > 2:5182620/1‑150 (MQ=255) cAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACGGGATGCAGAACACATCGCAAGGCTCGTTCaccaccaccaag > 1:5829928/1‑147 (MQ=255) aaCATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCAGCGAAGCAGCCCCACAATCACGGGATTCAGAACACTTCGATAGGCGCGTTAACCACCACCGTGCgg > 2:2594774/1‑150 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 1:1083724/150‑1 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 2:1832976/150‑1 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt > 2:4827829/1‑150 (MQ=255) aTGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCCCCGTGCGGTTg > 2:3779686/1‑150 (MQ=255) tcgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGATTCACAAAACATCGCTAGGCTCGTTAAACACCACCATGCGGTTGGGGt > 1:2621943/1‑150 (MQ=255) tcgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACAAACACCGGATGCAGAACACATCGCTAGGCTCGTTCACCACCAACATTCGGTTTGCGt > 1:4693667/1‑150 (MQ=255) cgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTc < 2:4454836/150‑1 (MQ=255) tggggACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCat < 1:5077730/148‑1 (MQ=255) caCCGGCGAGGGCGGGACCAATAACATAACCTATCACAACAACGAGCCATAACAAGCCGGGCCGGGGGCGGCCACGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATag < 1:1412525/149‑1 (MQ=255) aCCTGCTTTGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATagc < 1:4476524/150‑1 (MQ=255) tGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACATCGCTAGGCTCGTTCACCACCACCGTGCGGGTGGCGGCAGATagcagc > 2:4079306/1‑150 (MQ=255) cGAGGGCGGGACGAAGAAGATCATCTAACAGAAGAACGATCGATAAGCATCTGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCAc < 2:5890095/150‑1 (MQ=255) tGGCGGTACGATGAATAAAATTTATAATAACACCGATCTATACCCATCGGGGCCGGGGGCTGCGACGCCGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTg < 1:4138816/150‑1 (MQ=255) ggCGTGACGAATAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGc < 2:6407678/150‑1 (MQ=255) ggggACGAAGAATATCATCTATCACAAGAACGATCTATAAGCATCTGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCgg < 1:453657/149‑1 (MQ=255) gggACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGc > 1:549877/1‑150 (MQ=255) ggACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCt > 2:4333890/1‑150 (MQ=255) gACTAACAATATAATATATCACAAGAACTATCGATAAGCATCCGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTc < 1:1401142/150‑1 (MQ=255) gACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACATCGCTAGGCGCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCTGCGGCTc > 2:1421977/1‑150 (MQ=255) actaagaagATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTcc < 1:5703663/147‑1 (MQ=255) gaagaaGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACGGGATGCAGAAAACGTACCGAGGCGCGTTCACCACCACCATGCGGGTGGCGTCATATATCAGCACCAGCGGCGCCaa > 1:919717/1‑149 (MQ=255) agaagaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGATTCAGAACAAATAGCTAGGGTCGTTCAACAACACCATGCGGTTGGGGTCATATATCAGCACCAGCGGCTCCATCa > 1:115367/1‑150 (MQ=255) tattatcataTATCATAATAACGATCTATAAGCATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCAc < 2:250300/146‑1 (MQ=255) atcttcTTTCAGAAGAACGATCTATAAGAATCAGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGgc < 2:1131432/150‑1 (MQ=255) atcatcTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGgc < 2:4941091/150‑1 (MQ=255) atcTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGTGGGAAGCAGCCCCACACACACGGGGTGCAGAAAACTTAGCTAGGGGCGGTCACCACCCCCATGCGGGTGGCGGCATATATCAGCACCAGCGGCTCCATCACCGGCGcc > 1:3796517/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACTTCGCTAGGCTCGTTAACCACCACCATGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc > 2:1755269/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACATAGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCAGCGGCTCCATCACccgcgcccgcgc > 2:1139784/1‑150 (MQ=255) cAGAATAACGATCGAAACCCATCCGGGCCGGGGGCGGCCAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCt < 1:2309241/150‑1 (MQ=255) aagaaCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACATCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATAAATCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCGTcc > 1:3385875/1‑150 (MQ=255) aCGATCTATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 2:2861548/150‑1 (MQ=255) tatcgatAACCTTCTGGGCCGGGGGCTGCGATGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGa < 1:6447343/149‑1 (MQ=255) tctatACGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 1:3577441/147‑1 (MQ=255) tcgatAAGCATCCGGGCCCGGGGCTGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 1:1969437/150‑1 (MQ=255) tcgatAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 2:4211844/150‑1 (MQ=255) tcgatAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 2:4693667/150‑1 (MQ=255) atAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACGGGATGCAGAACACATAGCGAGGCGCGTTCACCCCCCCCGTGCGGGTGGCGTCCTATAGCAGCACCGGCGGCTCCATCACCCGCGCCCGCGCGTCCAGGCGCGAgcg > 2:6309841/1‑150 (MQ=255) tacgCATCTGGGCCGGGGGCGGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcgc < 1:2922637/147‑1 (MQ=255) tAAGCATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcgc < 2:980982/150‑1 (MQ=255) aTCAGGGCCCGGGGGGGCGAAGCAGCCCCACACTCAAGGGATGCAGAACAATTCGCTAGGCTCGGTCACCACCACCGTGCGGGTGGCGTCCTATAGCAGCACCTGCGGCGACATCACCGGCGCCCGCGCTTCCAGGCGGTAGCGCTCGcc > 2:1246578/1‑150 (MQ=255) aTCAGGGCCCGGGGCGGCGAAGCAGCCCCCCACGCACGGGGTGCAGAACACGTAGCTAGGCGCGGTCACCACCACCCGGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCCGCACCCGCGCCCGCGCGTCCAGGCGCTAGCGCGCGcc > 1:4985016/1‑150 (MQ=255) gggCCCGGGGCTGCGAAGCAGCCCCACACAAAACGGATGCAGAAAAAATCGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCTGCGGCGCCAACACCCGCGCCCCCGCGTCCCCGCCATAGCGCACCCCCGcc > 2:953945/1‑150 (MQ=255) ccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGa > 1:1324721/1‑150 (MQ=255) cGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa < 2:5792282/150‑1 (MQ=255) cGGGGCTGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa < 1:694648/150‑1 (MQ=255) gggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGt > 2:5247203/1‑150 (MQ=255) ggCTGCGAAGCAGCGCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 1:3522129/150‑1 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 1:5561250/150‑1 (MQ=255) gCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTg > 1:307077/1‑150 (MQ=255) tGCTAAGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc < 1:1442730/150‑1 (MQ=255) gAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCaaa > 1:4900716/1‑150 (MQ=255) gAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCaaa > 2:1953861/1‑150 (MQ=255) | AGGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAA > NC_002947/97444‑97741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |