| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 955,154 | G→A | 22.5% | intergenic (+105/‑208) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 955,154 | 0 | G | A | 22.5% | 283.5 / 84.1 | 155 | intergenic (+105/‑208) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (63/55); new base A (19/15); total (82/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.05e-02 | |||||||||||
Only 100 of 159 total aligned reads displayed.
AGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC > NC_002947/955008‑955303 | aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTc < 2:4886342/150‑1 (MQ=255) cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCGACAAGGTTCCTg > 2:3303943/1‑150 (MQ=255) cGCTGCGGATGTGCTGATGACCTACGCACGCTGAACCTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa < 2:6525622/150‑1 (MQ=255) cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa < 2:6525733/150‑1 (MQ=255) cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa < 2:3504839/150‑1 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c < 1:1445340/150‑1 (MQ=25) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c < 1:4823756/150‑1 (MQ=25) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCCCTCCAACAAGGTTCCTGTAGGAG‑c > 2:5947353/1‑150 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c < 1:175374/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c < 1:6189638/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c < 2:2973896/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑c < 2:3192945/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑c < 2:4196025/150‑1 (MQ=255) gCGTATGTGCTTATGACCTACGCACGATGAAACTGCTGCCTGTTTCAAGAAAACCCCGGCCACTGT‑GCCTGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgt < 1:6536110/150‑2 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTTGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg < 1:6862618/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg < 1:2803288/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg < 2:5087240/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg < 2:2534014/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg < 2:3191755/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgg < 2:6543070/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgg < 2:1675872/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCGGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg < 2:6464889/150‑1 (MQ=37) gCGGAGGTGCTGATGACCTACGCACGCTGAAACTGCGGCCTGTTTCACGAAACCCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgg < 1:3662330/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cggg < 1:3412775/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCACGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑CGGGt < 1:2147007/150‑1 (MQ=25) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTGTCACGAAAACCCCGGCCACGGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cggg < 2:4662515/150‑1 (MQ=255) gtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTAc < 2:755361/150‑1 (MQ=255) tgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTAcc < 2:3501061/150‑1 (MQ=255) gatgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGGCTCTTCGCGGGTAAAACCCCACCGACAAGGTTCGGGGTGGGG‑CGGGTTTTGCcgcg > 1:446686/1‑150 (MQ=255) tgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTTTCCTGTAGGAG‑CGGGTTTACCCGCGaa < 2:679372/150‑1 (MQ=255) aCCTCCGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACGGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTGCCTGTGCCGGCCTCTTCGCGGGGAACCCCGCTCCTACCAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAaga < 2:5530742/150‑1 (MQ=38) tACGCAGGCTGATCCTGCGGCCTGTTGCACGAAAACCCCGGCCAGTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCGTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACACGGTTCCTGTAGGTG‑CGGGTTTACCCGCGAAGAGGc < 2:3455140/150‑1 (MQ=25) tACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCGCTCCGACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGc > 2:5873832/1‑150 (MQ=255) tGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTCCCAGGTTCCTGTAGGAG‑CGGGGTTACCCGCGAAGAGGCCAGCACAGa > 2:5551960/1‑150 (MQ=255) tGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAg > 1:1971994/1‑117 (MQ=255) tttCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCCGCACAGAAAAATAAAAATAccg > 2:5883996/1‑149 (MQ=255) cGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTAGCGGGTTAAACCCCGCCGACCAGGTTGCGGGGGGCGCCGGGTTTA‑CCGCCAAGAGGGCCGCCCCGCAAAATAAAAATAACGGAttt > 2:2314391/1‑150 (MQ=255) aaaaCCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cggg < 2:552738/102‑1 (MQ=255) aaaaCCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cggg > 1:552738/1‑102 (MQ=255) gCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCCCGCCAACAAGGTTGCGGGAGGAG‑CGGGGTTACCCCCGCCGAGGCCCGCACACAAAAAAAAAAAAAACAGATTTTCAAAAAATAg > 2:2543344/1‑150 (MQ=255) cACGGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGAt < 2:5653458/150‑1 (MQ=255) ggttttttttttGGGGTTATTTTGCCTGGGCCGGCCTCTGCGGGGGAAACCCCGCTCCTACAGGGTTCCTGTTGTTG‑GGTTTTAACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGtt < 1:4330097/147‑1 (MQ=255) gtatttttttGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGAGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt < 2:6778838/147‑1 (MQ=255) gTTTTTTTTTGGGGTTATTTTTCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGTTCCTGTAGGAG‑CGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt < 2:6336258/150‑1 (MQ=255) gTTTTTTTTTGGGGGTATTTTTCCTGGGCCGGCCTCTGCGCGGGTAAACCCGCTCCTCCACGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt < 2:4879277/150‑1 (MQ=255) ttttttttGGGGTTTTTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCtaa < 1:2226506/150‑1 (MQ=255) ggTATTTTTCCTGTGCCGGCCTCTTCGCGGTTAAACCCGATCCTACAAGGTTCCTGTAGGTG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGaa < 1:2697009/150‑1 (MQ=255) gTATTTTTCCTGTGCCGGCCTCGTCGCGGGGAAACCCCCACCGACAAAGGTGCGGTGGGAG‑CCGGGTTACCCCCCAAGAGGCCCCCCCAGAAAAATAAAAAAAACAGCTTTTAAAAAAAAAGATCAGACAAGTTCAAAGAAAACAggcac > 2:1860474/1‑147 (MQ=255) tCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACTCGGTTCCTGTTGGCG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCt < 1:3943766/150‑1 (MQ=38) tgCCGGCATCTTGGCGGTAAACCCCGCTCCTCAATGGTTCCTGTTGGTG‑CGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACa < 1:1496866/150‑1 (MQ=255) gCCTCTTCGCGGGTAAAACCGCTCCTACAAGGTTCCGGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCAGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATACTTTACAGGCAt > 2:1594386/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAGGTTCCGGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCGTTACAGGCATCCTGt > 2:5240884/1‑150 (MQ=255) ggTAAACCCGCTCCTACACGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGc < 1:3920698/150‑1 (MQ=255) tAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCAc > 2:2794039/1‑150 (MQ=255) aCCCGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt > 1:2589466/1‑150 (MQ=37) cccGCTCCTACCAGGTTCCTGTAGGAG‑CGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc < 2:4249873/150‑1 (MQ=255) cccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 2:3995094/1‑150 (MQ=38) cccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:442600/1‑150 (MQ=255) cccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:6736174/1‑150 (MQ=255) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCGGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:3827670/1‑150 (MQ=37) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAACTTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:4502047/1‑150 (MQ=37) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:342473/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1700782/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:2678149/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:1495212/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:4388752/1‑150 (MQ=38) ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:684376/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTGTACAGGCATCCTGTTTCGGCACTAtct > 2:3055127/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATAATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:1280899/1‑150 (MQ=255) cGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt > 2:3465196/1‑150 (MQ=255) gCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 2:4048758/1‑150 (MQ=38) gCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc > 1:5584659/1‑138 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc < 2:5584659/138‑1 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:1606488/1‑150 (MQ=255) cTCCTACACGGTTCCTGTCGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttct < 1:3303943/150‑1 (MQ=255) tCCTACCAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTg > 2:2463691/1‑150 (MQ=255) ccTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGa < 1:2794039/150‑1 (MQ=255) cTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 2:2161469/1‑146 (MQ=255) cTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 1:2161469/146‑1 (MQ=255) cTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 1:5628939/146‑1 (MQ=255) tccatggTTCCTTTTGGAG‑CGGTTTCACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt < 1:5530752/145‑1 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:901948/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:3075817/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:785678/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:5126826/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:6537817/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:6164745/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:5320652/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGG‑CAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc > 1:5674881/1‑150 (MQ=255) cAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 1:104470/1‑150 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa < 1:5789330/149‑1 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 2:5789330/1‑149 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:5739102/1‑150 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:6474171/1‑150 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 2:1783190/1‑150 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:3118782/1‑150 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:3118461/1‑150 (MQ=255) aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg < 2:1828402/150‑1 (MQ=255) ggTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgc < 1:5067785/150‑1 (MQ=255) gTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgcc > 2:4055794/1‑150 (MQ=255) | AGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC > NC_002947/955008‑955303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |