Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 955,156 T→C 24.3% intergenic (+107/‑206) cyoE → / → alaC protoheme IX farnesyltransferase/aminotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947955,1560TC24.3% 287.1 / 90.9 159intergenic (+107/‑206)cyoE/alaCprotoheme IX farnesyltransferase/aminotransferase
Reads supporting (aligned to +/- strand):  ref base T (64/55);  new base C (19/19);  total (84/75)
Fisher's exact test for biased strand distribution p-value = 7.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.09e-01

Only 100 of 161 total aligned reads displayed.

AGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC  >  NC_002947/955008‑955303
                                                                                                                                                     |                                                                                                                                                     
aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTc                                                                                                                                                      <  2:4886342/150‑1 (MQ=255)
aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTc                                                                                                                                                      >  2:3158340/1‑150 (MQ=255)
  ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAAGGTTCCt                                                                                                                                                    >  2:3285569/1‑150 (MQ=255)
   cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTg                                                                                                                                                   <  1:3915083/150‑1 (MQ=255)
     gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTa                                                                                                                                                 <  1:4880572/150‑1 (MQ=255)
        cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa                                                                                                                                              <  2:3504839/150‑1 (MQ=255)
        cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa                                                                                                                                              <  2:6525733/150‑1 (MQ=255)
         gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c                                                                                                                                           <  1:4823756/150‑1 (MQ=25)
         gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGG‑TTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCCCTCCAACAAGGTTCCTGTAGGAG‑c                                                                                                                                           >  2:5947353/1‑150 (MQ=255)
          cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c                                                                                                                                           <  1:6189638/150‑1 (MQ=38)
          cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑c                                                                                                                                           <  1:175374/150‑1 (MQ=38)
          cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑c                                                                                                                                           <  2:3192945/150‑1 (MQ=255)
           tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cg                                                                                                                                          <  1:5407831/150‑1 (MQ=38)
            gCGTATGTGCTTATGACCTACGCACGATGAAACTGCTGCCTGTTTCAAGAAAACCCCGGCCACTGTGCCTGGTTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgt                                                                                                                                         <  1:6536110/150‑2 (MQ=38)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTTGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg                                                                                                                                         <  1:6862618/150‑1 (MQ=38)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCACCTTGTAGGAG‑Cgg                                                                                                                                         <  1:5598469/150‑1 (MQ=38)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg                                                                                                                                         <  2:1512091/150‑1 (MQ=38)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg                                                                                                                                         <  2:2534014/150‑1 (MQ=38)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgg                                                                                                                                         <  2:6543070/150‑1 (MQ=255)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cgg                                                                                                                                         <  2:1675872/150‑1 (MQ=255)
            gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCGGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑Cgg                                                                                                                                         <  2:6464889/150‑1 (MQ=37)
             cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑Cggg                                                                                                                                        <  1:3412775/150‑1 (MQ=255)
             cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTT‑CTGTGCTGGCCTCTTCACGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑CGGGt                                                                                                                                       <  1:2147007/150‑1 (MQ=25)
                aTGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGttt                                                                                                                                     <  1:2108466/150‑1 (MQ=255)
                  gtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAACCTTGTAGGAG‑CGGGtggtc                                                                                                                                   >  1:2194068/1‑146 (MQ=37)
                  gtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTAc                                                                                                                                   <  2:755361/150‑1 (MQ=255)
                     cTGATGACCTACGCACACTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCcg                                                                                                                                >  2:5530752/1‑150 (MQ=255)
                       gatgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTTAACCCGCGCCGACCAGGGTGCGGTAGGGG‑CGGGGTTACCcgcg                                                                                                                              >  2:1820906/1‑150 (MQ=255)
                           aCCTCCGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACGGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTGCCTGTGCCGGCCTCTTCGCGGGGAACCCCGCTCCTACCAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAaga                                                                                                                          <  2:5530742/150‑1 (MQ=38)
                              tACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCGCTCCGACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGc                                                                                                                       >  2:5873832/1‑150 (MQ=255)
                                cccccgcTGAACCTGCGGCCTGTGTCACGAAAACCCCGGCCCCTGTGCGGGGGATTTTTTTT‑GGGGGTATTTTACGTGGGCCGGCCTCTTCGCGGGTACCCCCGCTCCGACAAGGGACCGGTCGGAG‑CGGGTTTACCCGCGAAGAGGccg                                                                                                                     <  2:4151939/146‑2 (MQ=21)
                                       tGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAg                                                                                                                                                <  2:1971994/117‑1 (MQ=255)
                                                         cACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTG‑GGGGGTATTTTTCCTGTGCCGGCCACTTCGCGGGTAAACCCGCCCCTACACGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGAt                                                                                           <  2:2567712/150‑1 (MQ=255)
                                                          aCGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGAtt                                                                                          >  2:3355951/1‑150 (MQ=255)
                                                           cGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTAGCGGGTTAAACCCCGCCGACCAGGTTGCGGGGGGCGCCGGGTTTA‑CCGCCAAGAGGGCCGCCCC‑GCAAAATAAAAATAACGGAttt                                                                                         >  2:2314391/1‑150 (MQ=255)
                                                              accccccGCCCAC‑GGGCCGGGGTTTTTTTTTGGGGGGTATTTTCCCGGGGCCGCCCCCGCCGGGGGAAACCCCCCCCCAACACGGTCCCTGCTGGCG‑CGGGTTCACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCa                                                                                      <  1:1469556/147‑1 (MQ=255)
                                                                 ccccGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTGCTGTTGGTG‑CGGGTTTACCCGCGAAGAGGCCCGCACA‑GAAAAATAAAAATAACTGATTTTCaaaa                                                                                   >  2:5346375/1‑150 (MQ=38)
                                                                     ggCCACTGTGCGGGGTTTTTTTTTT‑GGGGTTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATa                                                                               <  1:6217403/150‑1 (MQ=255)
                                                                        cACGGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGAt                                                                            <  2:5653458/150‑1 (MQ=255)
                                                                                  ggtttttttttt‑GGGGTTATTTTGCCTGGGCCGGCCTCTGCGGGGGAAACCCCGCTCCTACAGGGTTCCTGTTGTTG‑GGTTTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGtt                                                                  <  1:4330097/147‑1 (MQ=255)
                                                                                    gtattttttt‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGAGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt                                                                <  2:6778838/147‑1 (MQ=255)
                                                                                    gTTTTTTTTT‑GGGGTTATTTTTCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGTTCCTGTAGGAG‑CGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt                                                                <  2:6336258/150‑1 (MQ=255)
                                                                                    gTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGAGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt                                                                <  2:6778910/150‑1 (MQ=255)
                                                                                             t‑GGGGTTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAACCCCGCTCCTACAGGGTTCGTGTTGGAG‑GGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACa                                                       <  1:2600705/150‑1 (MQ=38)
                                                                                             t‑GGGGGTATTTTACCTGTGCCGGCCTCTTCGCGGTTAAACCCGCTCCTACCAGGTTCCTGTTGGCG‑CGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACa                                                       <  1:3285569/150‑1 (MQ=38)
                                                                                               gggggTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAg                                                      <  2:2207011/150‑1 (MQ=255)
                                                                                                          tCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACTCGGTTCCTGTTGGCG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCt                                           <  1:3943766/150‑1 (MQ=38)
                                                                                                               tgCCGGCCTCTTCGCGGGTAAACCCGCTCATACACGGTTCCTGTAGGAG‑GGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACa                                      <  2:588182/150‑1 (MQ=255)
                                                                                                               tgCCGGCATCTTGGCGGTAAACCCCGCTCCTCAATGGTTCCTGTTGGTG‑CGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACa                                      <  1:1496866/150‑1 (MQ=255)
                                                                                                               ggCCGGCCCCTGCGCGGGTAAACCCGCACCAACCAGGTTCCTGTTGTAG‑CGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACa                                      <  1:442749/149‑1 (MQ=255)
                                                                                                                       tctTCGCGGGTAAACCCGCACCTACAGGAACCGTGTAGGGG‑CGGGTTTTCCCGCGAAGAGGCCCGCACA‑GAAAAATAAAAATAACTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAAAAGGAAATTATACGTTACAGGCaaacg                              >  2:159550/1‑146 (MQ=21)
                                                                                                                         ttCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAAAAAAACAGGAAATTATCCTTTACAGGCAGCCTGt                            >  2:5240903/1‑150 (MQ=255)
                                                                                                                         ttCGCGGGTAAACCCGCTCCTACAAGGTTCCGGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCGTTACAGGCATCCTGt                            >  2:5240884/1‑150 (MQ=255)
                                                                                                                           cgcgGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACC‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCGAATAAAACAGGAAATTATCCTTTACAGGCATCCTGttt                          >  2:3979732/1‑150 (MQ=255)
                                                                                                                               ggTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGc                      >  2:3499869/1‑150 (MQ=255)
                                                                                                                                 tAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCAc                    >  2:2794018/1‑150 (MQ=255)
                                                                                                                                 tAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCAc                    >  2:2794039/1‑150 (MQ=255)
                                                                                                                                  aaccccGCTCCTCCACGTTTCGTGTAGGCG‑CGGGTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACt                   <  1:3549158/147‑1 (MQ=39)
                                                                                                                                  aaaCCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACt                   >  1:4385864/1‑150 (MQ=255)
                                                                                                                                    aCCCGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt                 >  1:2589466/1‑150 (MQ=37)
                                                                                                                                    aCCCGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTGCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt                 >  1:166320/1‑150 (MQ=37)
                                                                                                                                    aCCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt                 >  2:4017283/1‑150 (MQ=255)
                                                                                                                                     cccGCTCCTACCAGGTTCCTGTAGGAG‑CGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc                <  2:4249873/150‑1 (MQ=255)
                                                                                                                                     cccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc                >  1:442600/1‑150 (MQ=255)
                                                                                                                                     cccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc                >  1:6736174/1‑150 (MQ=255)
                                                                                                                                      ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCGGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  1:3827670/1‑150 (MQ=37)
                                                                                                                                      ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAACTTATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  1:4502047/1‑150 (MQ=37)
                                                                                                                                      ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  2:4430716/1‑150 (MQ=38)
                                                                                                                                      ccGCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  1:3018178/1‑150 (MQ=38)
                                                                                                                                      ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  2:647419/1‑150 (MQ=255)
                                                                                                                                      ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  2:684376/1‑150 (MQ=255)
                                                                                                                                      ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTGTACAGGCATCCTGTTTCGGCACTAtct               >  2:3055127/1‑150 (MQ=255)
                                                                                                                                      ccGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATAATCCTTTACAGGCATCCTGTTTCGGCACTAtct               >  2:1280899/1‑150 (MQ=255)
                                                                                                                                       cGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt              >  2:3465196/1‑150 (MQ=255)
                                                                                                                                        gCTCCTCCTAGGTCCCTGTTGGAG‑GGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc             <  1:1820906/150‑1 (MQ=255)
                                                                                                                                        gCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCGGCACAGGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGACATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt              >  2:2499627/1‑150 (MQ=25)
                                                                                                                                        gCTCCTACAGGAACCTTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc             >  2:2975007/1‑150 (MQ=38)
                                                                                                                                        gCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc                         >  1:5584659/1‑138 (MQ=255)
                                                                                                                                        gCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc                         <  2:5584659/138‑1 (MQ=255)
                                                                                                                                           ccTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGa          <  1:2794039/150‑1 (MQ=255)
                                                                                                                                           ccTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGa          <  1:2794018/150‑1 (MQ=255)
                                                                                                                                            cTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAt         >  1:3357870/1‑150 (MQ=255)
                                                                                                                                             tccatggTTCCTTTTGGAG‑CGGTTTCACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt        <  1:5530752/145‑1 (MQ=255)
                                                                                                                                             tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt        >  2:6537817/1‑150 (MQ=255)
                                                                                                                                             tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt        >  2:901948/1‑150 (MQ=255)
                                                                                                                                             tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt        >  2:6164745/1‑150 (MQ=255)
                                                                                                                                             tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt        >  2:785678/1‑150 (MQ=255)
                                                                                                                                             tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt        >  1:5126826/1‑150 (MQ=255)
                                                                                                                                             tACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGG‑CAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc       >  1:5674881/1‑150 (MQ=255)
                                                                                                                                               cAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa      >  2:47857/1‑150 (MQ=255)
                                                                                                                                               cAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa      >  1:104470/1‑150 (MQ=255)
                                                                                                                                                aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa      >  2:5789330/1‑149 (MQ=255)
                                                                                                                                                aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa      <  1:5789330/149‑1 (MQ=255)
                                                                                                                                                aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg     <  2:1828402/150‑1 (MQ=255)
                                                                                                                                                aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg     >  1:5739071/1‑150 (MQ=255)
                                                                                                                                                aaGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg     >  1:3118782/1‑150 (MQ=255)
                                                                                                                                                   gTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgcc  >  2:4965583/1‑150 (MQ=255)
                                                                                                                                                   gTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgcc  >  2:4055794/1‑150 (MQ=255)
                                                                                                                                                    ttCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGaaa                                                  <  2:1407308/101‑1 (MQ=255)
                                                                                                                                                    ttCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGaaa                                                  >  1:1407308/1‑101 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTT‑GGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAG‑CGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC  >  NC_002947/955008‑955303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑