| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 97,594 | A→C | 7.8% | intergenic (+23/+13) | PP_0090 → / ← PP_0091 | hypothetical protein/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 97,594 | 0 | A | C | 7.8% | 509.6 / 12.3 | 193 | intergenic (+23/+13) | PP_0090/PP_0091 | hypothetical protein/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (108/65); new base C (3/16); total (111/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.20e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 215 total aligned reads displayed.
GGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAGC > NC_002947/97445‑97743 | ggCCCGAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGaa < 1:5812802/150‑1 (MQ=255) ccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagca > 1:4228938/1‑150 (MQ=255) cAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGcagcag > 1:1131432/1‑150 (MQ=255) cAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcag > 1:6504249/1‑150 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcagc < 2:5022053/150‑1 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagcagc < 2:6599262/150‑1 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAagcacc > 1:3078665/1‑148 (MQ=255) aGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGcc > 2:6213438/1‑150 (MQ=255) ggTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCca < 1:6103601/150‑1 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCACGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCTTCGCAGccccgg < 2:2817673/150‑3 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCTTCGCAGccccgg < 2:4709945/150‑3 (MQ=255) ttCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGACCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCacac > 2:3528815/1‑150 (MQ=255) tCGTCCTACACGCTGGAGTTCGTGCCCAACAGCGTGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCTATGGCGGGACGAAGAAGATCATCTATAAGAAGAACTATCTATAAGCATCAGGGCCTGGGGCTGATTCGCAGccccgggcc < 2:84903/150‑6 (MQ=255) cGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTc > 1:3507845/1‑150 (MQ=255) acacGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGa > 1:250300/1‑150 (MQ=255) ggAGATCGTGCCCAACAGCGTGGACAAGCACCAGAACTTGGTCGTCGGGACCGGGGATGGCGGCACGAAGAAGATCATCTATCAGAAGAACCATCGATAAGCAACTGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGaa < 2:1471043/150‑1 (MQ=255) ggAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGaa > 2:1602184/1‑150 (MQ=255) aTCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGCTGCAGAACACt > 2:3517283/1‑150 (MQ=255) tCGTGCCCAACAGCGAGGTCAAGGACCAGAACTTGGTCGTGGGGACCTGCGTGGGGGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACtt < 1:1672426/150‑1 (MQ=255) tCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACCGGATGCAGAacacat > 1:4023477/1‑148 (MQ=255) gTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCg > 2:4324040/1‑150 (MQ=255) gTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCg > 2:3075460/1‑150 (MQ=255) gTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACGCACCGGATGCAGAACACTTCg > 1:5625630/1‑150 (MQ=255) cccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTa > 2:3347806/1‑150 (MQ=255) ccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGCTGCAGAACACTTCGCTAg > 2:5808077/1‑150 (MQ=255) ccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTAGCTAg > 2:5705423/1‑150 (MQ=255) cAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACCCTCACGGGATGCAGAACACGTCGCTAgg > 2:6447343/1‑150 (MQ=255) cAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACGTCGCTAgg > 1:6653990/1‑150 (MQ=255) cAGCGAGGTCACGGACCAGAACTTGGTCGTCGGTACCTGCGATGGGGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTc < 2:2665495/150‑1 (MQ=255) aGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAATCACCCCCACACACACCGGATGCAGAAAACATCGCTAGGCTCg > 1:624955/1‑150 (MQ=255) aGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGAAGCAGAACACAAAGCAAGGCTCg > 1:1573551/1‑150 (MQ=255) gAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCAGCGAAGCAGCCCCACACACAACGGAAGCATAACACATCGCAAGGCTCGTTc > 1:4440925/1‑150 (MQ=255) ggTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAACGGGTGCAGAACACATAGCGAGGCGCGTTcac > 1:1805781/1‑150 (MQ=255) gTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAGGCTCGTTcacc > 1:2834058/1‑150 (MQ=255) tCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACGGGATGCAGAACACATCGCTAGGCTCGTTcacca > 1:2089792/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGACCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGCTGCAGAACACTTCGCTCGGCTCGGTcaccacc > 2:5799190/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGGGAAGCAGCCCCACAAACACGGGATGGAGAACAAATCGCTAGGCTCGTTgaccaac > 1:379620/1‑148 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 2:2211769/1‑150 (MQ=255) gACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCAAGGGATGCAGAACACTTCGCTAGGGTCGTTCaccaccacc > 1:2134632/1‑150 (MQ=255) aCCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCACCCCCACACAAAACGGTTGCAGAACACATAGCGAGGCGCGTTAACCACAACCt > 1:1995494/1‑150 (MQ=255) gAACTTGGTGGTGGGGACCTGCTTTGGCGGGACTAATAATATAATATATCATAAGAACTATCTATAAGAATCCGGGCCGGGGGCGGCTAAGCCCCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCg < 1:3537302/150‑1 (MQ=255) gAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGGGCGGAGCCGCCCCCCCCGCACGGGCTGCAGAACACATCGCTAGGCTCGTTCACCCCCCCCGTGCg > 1:240480/1‑150 (MQ=255) gAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACATCGCTAGGCGCGTTCACCACCACCATGCg > 1:4292672/1‑150 (MQ=255) aCATGGTCGTGGGGACCTGCTTTGGGGGTACTAAGAATATCATCTATCTGAAGAACGATCTATAAGCATCCGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGt < 1:5008472/150‑1 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 1:1083724/150‑1 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 2:4929518/150‑1 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 2:1832976/150‑1 (MQ=255) aTGGTCGTCGGGACCTGCGTTGGCGGTACTAATAATATCATCTATCAGAAGAACGATCGATAAGCATCTGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTg < 2:3045042/150‑1 (MQ=255) ggTCGTGGGGACCTGCGTTGGCGGGACTAATAATTTAATCTAACAGAACAACGTTCCATACGCATCCGGGCCGGGGGCTGCTAAGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGc < 1:788330/150‑1 (MQ=255) ggTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATCAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACGTCGCTCGGCTCGTTCACCACCACCTTGCGGTTGGc > 2:6488345/1‑150 (MQ=255) tcgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGt < 2:4170917/150‑1 (MQ=255) tcgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGATTCACAAAACATCGCTAGGCTCGTTAAACACCACCATGCGGTTGGGGt > 1:2621943/1‑150 (MQ=255) tcgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACAAACACCGGATGCAGAACACATCGCTAGGCTCGTTCACCACCAACATTCGGTTTGCGt > 1:4693667/1‑150 (MQ=255) gtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGGTGCAGAACACTTCGCTAGGCTCGTTCACCCCCACCATGCGGTTGGCGTCa > 2:3030508/1‑150 (MQ=255) gACCTGCGTTGGCGGGACTAATAAGATAATCTATCATAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATag < 2:2392018/150‑1 (MQ=255) caCCGGCGAGGGCGGGACCAATAACATAACCTATCACAACAACGAGCCATAACAAGCCGGGCCGGGGGCGGCCACGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATag < 1:1412525/149‑1 (MQ=255) aCCTGCTTTGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATagc < 1:4476524/150‑1 (MQ=255) ccTGCTTTGGCGGGACGAACAACATAATATACCCCAAGAACTTCCTATACGCATCCGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATagca < 1:798262/150‑1 (MQ=255) ggagggCGGTACTAATAATATAATCTATCAGAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCAc < 2:186444/146‑1 (MQ=255) ggcggcACGATGAATATATTCTATCACAACAAGGATCGAAAAGCATCCGGGCCGGGGGCTGCCACCCCCCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGc < 1:885947/150‑1 (MQ=255) ggggACGAAGAATATCATCTATCACAAGAACGATCTATAAGCATCTGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCgg < 1:453657/149‑1 (MQ=255) gggACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGc > 1:549877/1‑150 (MQ=255) ggACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCt < 2:4643990/150‑1 (MQ=255) gACTAACAATATAATATATCACAAGAACTATCGATAAGCATCCGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTc < 1:1401142/150‑1 (MQ=255) gACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACATCGCTAGGCGCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCTGCGGCTc > 2:1421977/1‑150 (MQ=255) aagaagATCATCTATCAGAAGAACGATCGATAAGCATCCGGGCCCGGGGCTGCCAACCAGCCCCACACAAACGGGATGCAGAAAAAATAGCTAGGCTAGTTAACAACCACCAAGCGGGTTGGGTCCTATAGCAGCACCAGCGGCTcccac > 1:4385815/1‑147 (MQ=255) agaagaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGATTCAGAACAAATAGCTAGGGTCGTTCAACAACACCATGCGGTTGGGGTCATATATCAGCACCAGCGGCTCCATCa > 1:115367/1‑150 (MQ=255) agaagaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACGGGGTGCAGAAAAAATCGCTAGGGGCGGTCACCACCCCCATGCGGGTTGGGTGAAATATCAGCACCAGCGGCGCCaacc > 1:3595373/1‑147 (MQ=255) atataatcTATAATAATAACGATCTATAAGCATCAGGGCCGGGGGCTGCTAAGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCg < 1:5350059/145‑1 (MQ=255) atcttcTTTCAGAAGAACGATCTATAAGAATCAGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGgc < 2:1131432/150‑1 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc > 2:6133768/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACTTCGCTAGGCTCGTTAACCACCACCATGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc > 2:1755269/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACATAGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCAGCGGCTCCATCACccgcgcccgcgc > 2:1139784/1‑150 (MQ=255) gaagaaCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCAGCGGCTCCATCACCGGCGCCCgcgcgta > 2:2544383/1‑147 (MQ=255) aagaaCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACATCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATAAATCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCGTcc > 1:3385875/1‑150 (MQ=255) aCGATCTATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 2:2861548/150‑1 (MQ=255) aCGATCGATACGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 2:5277741/150‑1 (MQ=255) aCGATCGATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 2:706773/150‑1 (MQ=255) tatcgatAACCTTCTGGGCCGGGGGCTGCGATGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGa < 1:6447343/149‑1 (MQ=255) tcgatAAGCATCCGGGCCCGGGGCTGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 1:1969437/150‑1 (MQ=255) tcgatAAGCATCAGGGCCCGGGGCTTCGAAGCTGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 2:4440925/150‑1 (MQ=255) atAAGAAACTGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcg < 1:5838934/150‑1 (MQ=255) tacgCATCTGGGCCGGGGGCGGCGACGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcgc < 1:2922637/147‑1 (MQ=255) tAAGCATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcgc < 2:980982/150‑1 (MQ=255) aTCAGGGCCCGGGGGGGCGAAGCAGCCCCACACTCAAGGGATGCAGAACAATTCGCTAGGCTCGGTCACCACCACCGTGCGGGTGGCGTCCTATAGCAGCACCTGCGGCGACATCACCGGCGCCCGCGCTTCCAGGCGGTAGCGCTCGcc > 2:1246578/1‑150 (MQ=255) tCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCg < 2:5337972/150‑1 (MQ=255) gggCCCGGGGCTGCGAAGCAGCCCCACACAAAACGGATGCAGAAAAAATCGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCTGCGGCGCCAACACCCGCGCCCCCGCGTCCCCGCCATAGCGCACCCCCGcc > 2:953945/1‑150 (MQ=255) ggCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACTTAGCAAGGCTCGTTCACCACCACCATGCGGTTGGCGTCAAATATCAGCACCAGCGGCTCCAACACCCGCGCCCCCGCTTACAGGCGATAGCGCTcgcccgcca > 2:6381975/1‑149 (MQ=255) gCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCtt < 1:4979461/150‑1 (MQ=255) tgtggggCTGCTTCGCAGCCCCGCACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg > 2:5173747/4‑150 (MQ=255) ccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGa > 2:3656144/1‑150 (MQ=255) ccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGa > 1:1324721/1‑150 (MQ=255) cGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa < 2:2281951/150‑1 (MQ=255) gggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGt > 2:5247200/1‑150 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt > 2:5128792/1‑150 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 1:5561250/150‑1 (MQ=255) gCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTg > 1:307077/1‑150 (MQ=255) tGCTAAGCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc < 1:1442730/150‑1 (MQ=255) gCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCa > 2:4046559/1‑150 (MQ=255) gCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCa < 1:989918/150‑1 (MQ=255) | GGCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAGC > NC_002947/97445‑97743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |