| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 968,881 | A→C | 6.2% | intergenic (‑311/+20) | PP_0831 ← / ← PP_t68 | hypothetical protein/tRNA‑Leu |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 968,881 | 0 | A | C | 6.2% | 731.1 / 27.6 | 235 | intergenic (‑311/+20) | PP_0831/PP_t68 | hypothetical protein/tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base A (126/94); new base C (10/5); total (136/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.23e-01 | |||||||||||
Only 100 of 242 total aligned reads displayed.
CAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCTT > NC_002947/968732‑969030 | aTACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAgg > 2:3420767/1‑150 (MQ=255) tACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGt > 2:630616/1‑150 (MQ=255) tttCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCgg > 1:1480275/1‑150 (MQ=255) tttCGCAATATCTCGCACGAATGACCGCTAAAGTGCTCGCGCCAGGGGCGGCCAATCGAATGCTGCTAGGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGAACAAAAAAACCGACCGTAAGGTCgg < 2:3653175/150‑1 (MQ=255) tCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCATTAGACTGCCGGTAGGGGGGGAGGGGCGGGAGGCAGGGGGGCGGCGTCTACGACGTGCGTGAATCGCAGGCACATAAAAACCGACCTTACGGTCGGtt < 2:2672492/150‑1 (MQ=255) gcGGACTATATCCGACGAATGACAGCTTAAGCGCTAGCGCAAGGGGCGGCCAATAGAAGGCAGGTAGGGGGGGCGGCGCGGGAGCCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGtt < 2:389319/149‑1 (MQ=255) tatatCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTcg > 2:6221040/1‑149 (MQ=255) atatCTGACGAATGACAGCTCAAGTGCTAGCGCACGGGGCGGCCAATCGAAGGCAGGTATGGGGGGAGCCGCGGGAGTCCGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGtttttttgt < 2:2577864/150‑4 (MQ=255) atCTGACGAATGACAGCTTAAGTGATAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGCGGAGGAGCGGGAGACAGGGGGGCGGCGACAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGAACGTAAGGTCGGTTATTTCCGGa > 2:2296828/1‑150 (MQ=255) accTGACGCATGACAGCCCAAGTGCCAGCGCACGGGGCGGCCAACAGAATGCAGGGCTGGGGGGAGGCGCGGGAGGCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCTTACGGTCGGtttttttgtgc < 2:756030/148‑6 (MQ=255) tGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGAttt > 1:3643499/1‑150 (MQ=255) tGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGAttt > 1:1539999/1‑150 (MQ=255) gACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGTCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTg > 2:5922774/1‑150 (MQ=255) gAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTg > 2:1051017/1‑150 (MQ=255) gAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTg > 1:953976/1‑150 (MQ=255) aGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAg > 2:6728582/1‑150 (MQ=255) gCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAgg > 1:5058390/1‑150 (MQ=255) ctaaaGTGCTAGCGCACGGGGCGGCCAAGAGACTGCAGGTCTGGGGGGAGGCGCGGAAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAggg < 2:6140311/147‑1 (MQ=255) cTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAggg > 2:1994117/1‑150 (MQ=255) ttACGTGCGAGCGCAAGGGGCGGCCAATAGAAGCCAGGGATGGGGGGAGGCGCGGGAGGCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGga < 2:4980933/150‑1 (MQ=255) ttAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGga > 2:2049168/1‑150 (MQ=255) tAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGgag > 1:6817157/1‑150 (MQ=255) tAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGaa > 1:4865738/1‑150 (MQ=255) gcAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTcc > 1:6678602/1‑150 (MQ=255) aaGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCa > 1:4016330/1‑150 (MQ=255) ggggCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACt > 1:1822209/1‑150 (MQ=255) ggcCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCCACCGTAAGGTCGCTTTTTTCCGGAGTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCttg > 2:4693763/1‑149 (MQ=255) gcCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTc > 2:5667732/1‑150 (MQ=255) ccAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCg > 1:5811161/1‑150 (MQ=255) aaTAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGaa > 2:1510225/1‑150 (MQ=255) aTAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGaaa > 1:6433242/1‑150 (MQ=255) tAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGaaaa > 1:4406080/1‑150 (MQ=255) tAGAAGGCAGCGATGGGGGGAGGCGCGGCCGGCCGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGaaaa < 2:2869468/150‑1 (MQ=255) aTGCAGGTATGGGGGGAGGCGCGGGAGTCA‑GGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAt < 2:1515181/150‑1 (MQ=255) cggtcgggggggAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAtttt < 2:4327063/144‑1 (MQ=255) cgggcgggggggAGGCGCGGGCGCCCGGGGGGCGGCGTCAACGACGTGCGTGAAACGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAtttt < 2:6007833/144‑1 (MQ=255) cggcaTGGGGGGACGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGGGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAtttt < 2:2476041/146‑1 (MQ=255) ttgggggggCGGCGGGGGTGGGGGGGGGGCGGCGTCACCGAGGTGGGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa < 1:1257984/147‑1 (MQ=255) gccgggggcAGGCGCGGCCCCCCGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCAAAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGaa < 2:1200354/147‑1 (MQ=255) gggAGGCGCGGGAGTCA‑GGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATccgccg > 2:4139854/1‑150 (MQ=255) ggAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATccgccg > 2:1328970/1‑150 (MQ=255) cgcgGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCt > 1:6491281/1‑150 (MQ=255) cgGGCGCCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTAc < 2:2202189/150‑1 (MQ=255) tCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCg > 2:4396606/1‑73 (MQ=255) aGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCg > 1:4667290/1‑150 (MQ=255) gcggcgTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCa > 1:5479795/1‑150 (MQ=255) gcggcgTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCa < 2:2126802/150‑1 (MQ=255) gggTCACCGCCGGGCGTGAAGCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAggg < 2:2445722/148‑1 (MQ=255) cggcaccgacgGGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCCTCAGGGc < 2:2884790/144‑1 (MQ=255) cgTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGc < 2:870505/150‑1 (MQ=255) gTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCg > 1:2942113/1‑150 (MQ=255) cAACGACGTGCGTGAAGCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTg < 2:3503165/150‑1 (MQ=255) aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTgg > 1:2602870/1‑150 (MQ=255) aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTgg > 1:2847504/1‑150 (MQ=255) aaCGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTgg > 1:6186283/1‑150 (MQ=255) tgtgcgtgcgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCCTCAGGGCGTGgc > 2:4848831/5‑150 (MQ=255) gtgcgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCa < 1:2788935/150‑1 (MQ=255) gtgcgtgAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCa < 1:178163/150‑1 (MQ=255) tgAAGCGCAGGCAAAAAAAAACCGCCCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGtata < 1:2434473/150‑1 (MQ=255) aaTCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATaaa < 2:1616753/150‑1 (MQ=255) aTCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAag < 1:1942506/150‑1 (MQ=255) tCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATCAaga > 1:4438108/1‑150 (MQ=255) tCGCAGGAACTATAATACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGTGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATTAaga < 2:1670373/150‑1 (MQ=255) cGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAagag < 1:5667732/150‑1 (MQ=255) cAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGt > 2:4482923/1‑150 (MQ=255) cAGGCAAAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGt < 1:1590881/150‑1 (MQ=255) aGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTg > 2:2361532/1‑150 (MQ=255) gCACAAAAAAACCGACCGGACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGAGTTGGAATCCGCCGCGTCTACCACGTCCGCCATCAGGGCGTGGCGCGCAGGCTCAAGAGGTGcc > 2:4543512/1‑150 (MQ=255) cacaAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTCTAGTGAGGTGCCg > 1:5166553/1‑150 (MQ=255) acaAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGc > 2:3180835/1‑150 (MQ=255) acaAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGc > 2:1897195/1‑150 (MQ=255) ggaaaaaaCCGACCTTACGGTCGGTTTTTTACGGATTTTGTGCCCCCAGGGAGACACGAACACCCCCTCCGTTCGAAAAAGGATTTTGAATACGCCGCGTCTACCAATTACGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCt > 1:4970218/3‑150 (MQ=255) aaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTg > 1:4309737/1‑150 (MQ=255) aaaaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTg > 1:3868508/1‑150 (MQ=255) aaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggt > 1:1642284/1‑150 (MQ=255) aaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggt > 2:5226923/1‑150 (MQ=255) aaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggt > 2:6373540/1‑150 (MQ=255) aaaaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggt < 2:6446943/150‑1 (MQ=255) aaaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcg < 1:1385089/150‑1 (MQ=255) aaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcgg > 2:3462584/1‑150 (MQ=255) aaCCGACCTTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGGGGCGCGCAGTATCAAGAGGTGCCGCTggtcgg > 2:2952056/1‑150 (MQ=255) aaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcgg > 2:4228225/1‑150 (MQ=255) aaCCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcgg > 2:5388618/1‑150 (MQ=255) accgacctTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggt > 2:5326578/1‑150 (MQ=255) accgacctTACGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACGCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTACGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCGggtcggt > 1:4749510/1‑150 (MQ=255) accgaccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggt < 1:1085410/150‑1 (MQ=255) ccgaccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggtc < 2:6612896/150‑1 (MQ=255) ccgaccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTggtcggtc < 2:6817157/150‑1 (MQ=255) accgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAg > 2:2612455/1‑122 (MQ=255) accgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAAt < 2:2551785/150‑1 (MQ=255) ccgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATc > 1:358449/1‑150 (MQ=255) cgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCg > 2:5097306/1‑150 (MQ=255) cgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCg > 1:6245598/1‑150 (MQ=255) cgTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCg > 2:1380525/1‑150 (MQ=255) tAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGc < 2:715442/150‑1 (MQ=255) tAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTAGGTCAATCGGc > 1:3348342/1‑150 (MQ=255) aGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCtt < 2:4353205/150‑1 (MQ=255) aGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCtt < 1:3420767/150‑1 (MQ=255) aGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCtt < 1:469035/150‑1 (MQ=255) aGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCtt < 1:734271/150‑1 (MQ=255) | CAATACTTTCGGAATATATCTGACGAATGACAGCTTAAGTGCTAGCGCAAGGGGCGGCCAATAGAATGCAGGTATGGGGGGAGGCGCGGGAGTCAGGGGGGCGGCGTCAACGACGTGCGTGAATCGCAGGCACAAAAAAACCGACCGTAAGGTCGGTTTTTTCCGGATTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCGTGGCGCGCAGTATAAAGAGGTGCCGCTGGTCGGTCAATCGGCTT > NC_002947/968732‑969030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |