BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,056,923	C→T	6.4%	A466T (GCT→ACT) ‡	PP_0910 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,056,923	0	C	T	6.4%	1085.9 / 39.8	345	A466T (GCT→ACT) ‡	PP_0910	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (167/156); new base T (8/14); total (175/170)
Fisher's exact test for biased strand distribution p-value = 1.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 354 total aligned reads displayed.

GCGATGGCGGCGGAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCC  >  NC_002947/1056774‑1057071

 cGATGGCGGCGGAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAgcg                                                                                                                                                     <  2:235868/150‑1 (MQ=255)

   aTGGCGGCGGAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAgcgcg                                                                                                                                                   <  1:77224/150‑1 (MQ=255)

     ggcggcGGAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCgct                                                                                                                                                 <  1:4650340/150‑1 (MQ=255)

      gcggcgGAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCgctg                                                                                                                                                <  2:1799997/150‑1 (MQ=255)

        ggcggAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCgctgct                                                                                                                                              >  2:3591732/1‑150 (MQ=255)

         gcggAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAGCGCGCTGCGTTGCTc                                                                                                                                             <  1:3378751/150‑1 (MQ=255)

         gcggAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAGCGCGCTGCGTTGCTc                                                                                                                                             <  2:6181591/150‑1 (MQ=255)

         gcggAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTc                                                                                                                                             <  2:4733974/150‑1 (MQ=255)

         gcggAGGTCACTGCTTGCGGGTCGTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAGCGCGCTGCGTTGCTc                                                                                                                                             <  2:4408102/150‑1 (MQ=255)

           ggAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAGCGCGCTGCGTTGCTCgc                                                                                                                                           <  1:4077393/150‑2 (MQ=255)

             aGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCa                                                                                                                                         <  1:6041092/150‑1 (MQ=255)

              ggTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCAt                                                                                                                                        >  2:5530169/1‑150 (MQ=255)

               gTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAGCGCGCTGCGTTGCTCgcgttc                                                                                                                                       <  1:3264791/150‑6 (MQ=255)

                 cACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGa                                                                                                                                     >  2:785218/1‑150 (MQ=255)

                 cACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGa                                                                                                                                     >  2:681198/1‑150 (MQ=255)

                   cTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGaaa                                                                                                                                   <  1:1733652/150‑1 (MQ=255)

                   cTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGaaa                                                                                                                                   <  1:2771298/150‑1 (MQ=255)

                     gCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGt                                                                                                                                 <  1:2477488/150‑1 (MQ=255)

                       ttGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACTCAGCGCGCTGCTCGGCATCGAAAGTGa                                                                                                                               <  1:6624856/150‑1 (MQ=255)

                       ttGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGa                                                                                                                               >  1:1074163/1‑150 (MQ=255)

                       ttGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGa                                                                                                                               <  1:3162400/150‑1 (MQ=255)

                       ttGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGa                                                                                                                               <  1:2240537/150‑1 (MQ=255)

                       ttGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGa                                                                                                                               <  1:2565039/150‑1 (MQ=255)

                         gCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGt                                                                                                                             <  1:1169114/150‑1 (MQ=255)

                           gggTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTAc                                                                                                                           <  1:280923/150‑1 (MQ=255)

                              tCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGaa                                                                                                                        <  2:3176075/150‑1 (MQ=255)

                                ttGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAAt                                                                                                                      >  1:4235480/1‑150 (MQ=255)

                                ttGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAAt                                                                                                                      >  2:2480371/1‑150 (MQ=255)

                                 tgtgGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAAtt                                                                                                                     <  2:6284647/150‑1 (MQ=255)

                                  gtgGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTg                                                                                                                    >  2:2911030/1‑150 (MQ=255)

                                  gtgGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTg                                                                                                                    >  1:6002175/1‑150 (MQ=255)

                                   tgGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGc                                                                                                                   >  2:5305928/1‑150 (MQ=255)

                                   cgacGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGc                                                                                                                   >  2:4185240/4‑150 (MQ=255)

                                    ggCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCg                                                                                                                  >  2:1119729/1‑150 (MQ=255)

                                    ggCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTGTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCg                                                                                                                  >  2:4035920/1‑150 (MQ=255)

                                       gAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTgc                                                                                                               >  1:5581181/1‑150 (MQ=255)

                                        aGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTgcc                                                                                                              <  2:4678610/150‑1 (MQ=255)

                                         gCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTgccg                                                                                                             <  2:5129823/150‑1 (MQ=255)

                                          cAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTgccgc                                                                                                            >  2:2066343/1‑150 (MQ=255)

                                               aCCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTgccgccaacg                                                                                                       >  1:1858545/1‑146 (MQ=255)

                                                 cGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCt                                                                                                     >  2:4987242/1‑150 (MQ=255)

                                                   aGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTc                                                                                                   <  1:2888150/150‑1 (MQ=255)

                                                           tGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGt                                                                                           <  1:4700301/150‑1 (MQ=255)

                                                             cggcgAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGc                                                                                         <  1:2669406/150‑1 (MQ=255)

                                                                     cTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCAc                                                                                 <  1:3516492/150‑1 (MQ=255)

                                                                      tGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACg                                                                                >  1:4758372/1‑150 (MQ=255)

                                                                      tGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACg                                                                                >  1:6737729/1‑150 (MQ=255)

                                                                              aacaGTTTGGGTCTGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAg                                                                        >  1:3219888/1‑150 (MQ=255)

                                                                                 aGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAg                                                                     <  1:6152877/150‑1 (MQ=255)

                                                                                  gTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAgg                                                                    <  2:592262/150‑1 (MQ=255)

                                                                                   tttGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGt                                                                   >  2:3378531/1‑150 (MQ=255)

                                                                                      gggTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGc                                                                <  2:6002175/150‑1 (MQ=255)

                                                                                       ggTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCg                                                               >  1:270223/1‑150 (MQ=255)

                                                                                        gTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCgg                                                              <  2:5203876/150‑1 (MQ=255)

                                                                                           ggAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGgcg                                                           <  1:2911030/150‑1 (MQ=255)

                                                                                            gAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGtt                                                                  <  2:1458627/142‑1 (MQ=255)

                                                                                             aaCATGCCCGGCGCCTGTGCGCGTTTACAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGcgcg                                                         <  2:5782429/150‑1 (MQ=255)

                                                                                              aCATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCgg                                                        <  1:834953/150‑1 (MQ=255)

                                                                                              aCATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCgg                                                        >  1:4975807/1‑150 (MQ=255)

                                                                                              aCATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCgg                                                        <  1:5059994/150‑1 (MQ=255)

                                                                                                aTGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGcc                                                      <  1:1692430/150‑1 (MQ=255)

                                                                                                aTGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGcc                                                      <  2:6495541/150‑1 (MQ=255)

                                                                                                  gCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGt                                                    >  1:5169080/1‑150 (MQ=255)

                                                                                                   cccGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTc                                                   >  2:5492573/1‑150 (MQ=255)

                                                                                                    ccGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCa                                                  <  2:5845113/150‑1 (MQ=255)

                                                                                                     cGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCAt                                                 >  1:1434822/1‑150 (MQ=255)

                                                                                                     cGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCAt                                                 <  2:1203470/150‑1 (MQ=255)

                                                                                                       gCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGc                                               <  1:6837104/150‑1 (MQ=255)

                                                                                                       gCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGc                                               <  2:6055758/150‑1 (MQ=255)

                                                                                                        cTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCa                                              <  2:6561859/150‑1 (MQ=255)

                                                                                                         tCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAg                                             >  2:1980288/1‑150 (MQ=255)

                                                                                                           cTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGa                                           <  2:2756156/150‑1 (MQ=255)

                                                                                                            tttGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGaa                                          <  1:5942528/150‑1 (MQ=255)

                                                                                                            tttGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGaa                                          >  1:397380/1‑150 (MQ=255)

                                                                                                                cgcgTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGAAGGAACTgg                                      >  1:4054856/1‑150 (MQ=255)

                                                                                                                 gcgTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGc                                     >  2:4543246/1‑150 (MQ=255)

                                                                                                                    tttAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTAt                                  <  1:4563183/150‑1 (MQ=255)

                                                                                                                          gTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCAc                            <  1:539946/150‑1 (MQ=255)

                                                                                                                          gTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCAc                            >  1:3469077/1‑150 (MQ=255)

                                                                                                                           tGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACt                           <  1:3591732/150‑1 (MQ=255)

                                                                                                                           tGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACt                           >  1:488127/1‑150 (MQ=255)

                                                                                                                           tGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACt                           >  1:1941552/1‑150 (MQ=255)

                                                                                                                           tGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACt                           <  1:178880/150‑1 (MQ=255)

                                                                                                                             aGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCACGCAGGTTGCGGGCGCGGCCGGCATGCAGGAACTGGCTATGGCCACTGa                         >  2:3797809/1‑150 (MQ=255)

                                                                                                                              gTTCAGGAACGCGGGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGAc                        <  1:1119749/150‑1 (MQ=255)

                                                                                                                                  aGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCACGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGtt                    <  1:2127543/150‑1 (MQ=255)

                                                                                                                                    gatgccgAGCAGCGCGCTGCGTTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTc                  >  1:3724295/6‑150 (MQ=255)

                                                                                                                                    gAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGgcg                                                           >  2:6804177/1‑109 (MQ=255)

                                                                                                                                    gAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTc                  >  2:1731427/1‑150 (MQ=255)

                                                                                                                                     aaCGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCg                 <  1:933138/150‑1 (MQ=255)

                                                                                                                                     aaCGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCg                 >  2:2130900/1‑150 (MQ=255)

                                                                                                                                      aCGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGc                >  2:2270609/1‑150 (MQ=255)

                                                                                                                                        gcgAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTc              <  1:1009841/150‑1 (MQ=255)

                                                                                                                                         cgAGCAGCGCGCTGCGTTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCa             >  1:2061541/1‑150 (MQ=255)

                                                                                                                                         cgAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCa             <  1:5305953/150‑1 (MQ=255)

                                                                                                                                           aGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAgg           <  1:5835379/150‑1 (MQ=255)

                                                                                                                                            gCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGc          <  1:2199934/150‑1 (MQ=255)

                                                                                                                                               aCGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGa       >  2:3621369/1‑150 (MQ=255)

                                                                                                                                                  cAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGc    <  1:638050/150‑1 (MQ=255)

                                                                                                                                                    gcgcgcTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGccc  <  1:1467831/150‑1 (MQ=255)

GCGATGGCGGCGGAGGTCACTGCTTGCGGGTCTTGTGGCGAGCAGGCACCGAGGGCGAGTGCGGCGAGGCTGGTGAACAACAGTTTGGGTCGGAACATGCCCGGCTCCTTTGCGCGTTTAAAGTGAGTTCAGGAACGCGAGCAACGCAGCGCGCTGCTCGGCATCGAAAGTGAGTACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCC  >  NC_002947/1056774‑1057071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`