| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,163,121 | C→T | 84.8% | A100V (GCG→GTG) | gtsA → | mannose/glucose ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,163,121 | 0 | C | T | 84.8% | 815.6 / 113.1 | 323 | A100V (GCG→GTG) | gtsA | mannose/glucose ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (20/29); new base T (108/166); total (128/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01 | |||||||||||
Only 100 of 328 total aligned reads displayed.
CCAGGTCGAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATCCACCGCATCAACTGG > NC_002947/1162972‑1163269 | gTCGAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGcc > 1:2613292/1‑150 (MQ=255) gTCGAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGcc > 2:1735517/1‑150 (MQ=255) gAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCAcc > 2:983235/1‑150 (MQ=255) gAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCAcc > 2:5789557/1‑150 (MQ=255) gAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCAcc > 2:3339446/1‑150 (MQ=255) gAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCAcc > 1:2425962/1‑150 (MQ=255) aaaaaGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCg < 1:3190655/150‑1 (MQ=255) aaaGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGc < 1:1165969/150‑1 (MQ=255) aaGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGcc < 1:5494258/150‑1 (MQ=255) aGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCt > 1:1835532/1‑150 (MQ=255) aCGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGc < 1:6021386/150‑1 (MQ=255) ttCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGAc < 1:478763/150‑1 (MQ=255) ttCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGAc > 1:5015738/1‑150 (MQ=255) aTCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGcc > 2:4821154/1‑150 (MQ=255) tCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCg < 2:672879/150‑1 (MQ=255) tCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGGGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCg < 1:5378149/150‑1 (MQ=255) tGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGAt < 1:162513/150‑1 (MQ=255) tGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGAt > 2:6257644/1‑150 (MQ=255) ggAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGAtg > 2:6217823/1‑150 (MQ=255) ggAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCAGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGAtg > 1:4980361/1‑150 (MQ=255) ggAAGGACGGCGCCGGCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCACAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGAtg < 2:5343204/150‑1 (MQ=255) aaGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGAtgtg > 2:2301783/1‑150 (MQ=255) aaGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGAtgtg < 2:2152955/150‑1 (MQ=255) aGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGc < 2:6768597/150‑1 (MQ=255) accaccgccgcCGGCGACGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTc > 2:5940359/6‑150 (MQ=255) aCGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCa > 1:4559887/1‑150 (MQ=255) cGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCaa < 2:1892266/150‑1 (MQ=255) cGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCaa < 2:5687345/150‑1 (MQ=255) gcgcCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAgg < 2:4281129/150‑1 (MQ=255) cgcCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGa < 1:4006957/150‑1 (MQ=255) gcCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGAt < 1:2862336/150‑1 (MQ=255) ccGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGAtg > 1:1081859/1‑150 (MQ=255) gTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGAtgtg > 2:8673/1‑150 (MQ=255) tCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGAAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTgg < 2:6817291/150‑1 (MQ=255) cggcggcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaa > 1:959426/1‑150 (MQ=255) cggcggcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaa < 1:3262206/150‑1 (MQ=255) cggcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGAtgt > 1:364500/1‑141 (MQ=255) cggcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaagga < 1:5309428/150‑1 (MQ=255) ggcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaaggaa < 2:1841378/150‑1 (MQ=255) ggcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaaggaa < 1:1586930/150‑1 (MQ=255) gcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaaggaag < 2:2092183/150‑1 (MQ=255) gcggTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCaaggaag < 1:3970966/150‑1 (MQ=255) tggtgCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGaaa < 1:4244640/150‑1 (MQ=255) gtgCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGt > 2:4771942/1‑150 (MQ=255) tgCAACGGCCATGACCGTGCTCAAAAGTCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTg < 1:5211304/150‑1 (MQ=255) tgCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTg < 2:3956016/150‑1 (MQ=255) gCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTgg < 2:6416062/150‑1 (MQ=255) gCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTgg < 1:5669228/150‑1 (MQ=255) cAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTggg < 1:3026214/150‑1 (MQ=255) cAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTggg > 1:4466788/1‑150 (MQ=255) aaCGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCCGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGa > 1:4184870/1‑150 (MQ=255) aaCGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGa < 2:1571327/150‑1 (MQ=255) aaCGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGa < 1:900826/150‑1 (MQ=255) aaCGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGa < 1:6148081/150‑1 (MQ=255) aaCGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGa < 1:63462/150‑1 (MQ=255) ccATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCgc < 2:6077856/150‑1 (MQ=255) cATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCCAGGAAGGAAAGTGGGACTCgct > 2:946664/1‑150 (MQ=255) cATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCgct > 2:117383/1‑150 (MQ=255) tGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCgctgc < 1:1509969/150‑1 (MQ=255) aCCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTc < 2:3100884/150‑1 (MQ=255) aCCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACCCGCTGCTc < 2:4184574/150‑1 (MQ=255) gCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACaa < 1:6517539/150‑1 (MQ=255) aaaaGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGaaa > 2:5851971/1‑150 (MQ=255) aGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTg < 2:4990662/150‑1 (MQ=255) ccGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGc < 2:2827343/150‑1 (MQ=255) cgcgCAGTGGCCGGCAACCCGGCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGcc < 1:1394948/150‑1 (MQ=255) cgcgCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGcc < 1:3538665/150‑1 (MQ=255) cGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGaa < 1:2128663/150‑1 (MQ=255) cGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGaa < 2:3511568/150‑1 (MQ=255) ggCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAg < 2:4023771/150‑1 (MQ=255) gCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGt < 2:4519089/150‑1 (MQ=255) aCCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGACAGTGGCCGACACCGTGAAGTacg > 2:357099/1‑150 (MQ=255) cccGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTacga > 1:4681450/1‑150 (MQ=255) ccgccgGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTacgac > 2:1996175/1‑150 (MQ=255) ccgccgGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTacgac < 1:5810437/150‑1 (MQ=255) cgccgGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTacgacg > 1:3753448/1‑150 (MQ=255) cgccgGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTacgacg > 2:3209537/1‑150 (MQ=255) gccgGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACgg > 1:6486610/1‑150 (MQ=255) ccgGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGt < 1:6766362/150‑1 (MQ=255) gggCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGa < 1:127209/150‑1 (MQ=255) cgcgCAGATCAAAGGCCCGGACATCCAGGCCTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGt < 1:2321812/150‑1 (MQ=255) cgcAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTc < 2:458606/50‑1 (MQ=255) cAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGcc < 2:5415874/150‑1 (MQ=255) cAGATCAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGcc < 2:4932512/150‑1 (MQ=255) aTCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGACCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTa > 2:407727/1‑150 (MQ=255) cAAAGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTAcc > 1:3372939/1‑150 (MQ=255) cAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTAcc < 2:5251807/150‑1 (MQ=255) aaaGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCg > 2:3895094/1‑150 (MQ=255) aaGGCCCGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCgg > 1:687093/1‑150 (MQ=255) ccGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAat > 1:4382072/1‑150 (MQ=255) ccGGACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAat > 1:2715099/1‑150 (MQ=255) ggACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAatat > 2:652209/1‑150 (MQ=255) gACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAatatn < 1:2266028/150‑2 (MQ=255) gACATCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATc > 1:3609273/1‑150 (MQ=255) gACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATc < 1:2018086/150‑1 (MQ=255) tCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGaa < 2:2539194/109‑1 (MQ=255) tCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGaa > 1:2539194/1‑109 (MQ=255) tCCAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATCCAcc > 2:1374094/1‑150 (MQ=255) ccAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATCCACCg > 1:6859106/1‑150 (MQ=255) cAGGACTGGGTGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATCCACCGc > 2:552506/1‑150 (MQ=255) | CCAGGTCGAAAAAGACGGCTTCATCTGGAAGGACGGCGCCGTCGCCGGCGGCGGTGGTGCAACGGCCATGACCGTGCTCAAAAGCCGCGCAGTGGCCGGCAACCCGCCGGGCGTCGCGCAGATCAAAGGCCCGGACATCCAGGACTGGGCGGCCACCGGCCTGCTCGACGCCGATGTGCTCAAGGATGTGGCCAAGGAAGGAAAGTGGGACTCGCTGCTCGACAAGAAAGTGGCCGACACCGTGAAGTACGACGGTGACTACGTTGCCGTACCGGTGAATATCCACCGCATCAACTGG > NC_002947/1162972‑1163269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |