| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,230,428 | G→T | 5.4% | intergenic (‑49/+97) | gltJ ← / ← gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,230,428 | 0 | G | T | 5.4% | 1006.0 / 31.9 | 296 | intergenic (‑49/+97) | gltJ/gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (132/148); new base T (10/6); total (142/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
Only 100 of 302 total aligned reads displayed.
CGATGGTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTT > NC_002947/1230280‑1230576 | tggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGgc < 2:280887/150‑1 (MQ=255) ggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGgcg < 1:560589/150‑1 (MQ=255) tCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCa > 1:1856365/1‑150 (MQ=255) ccAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCACTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCaa > 1:1629924/1‑150 (MQ=255) cAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGgcgctcg > 2:2470471/1‑147 (MQ=255) cccAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGgcg > 1:3230300/1‑150 (MQ=255) cccAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGgcg < 1:6393352/150‑1 (MQ=255) cAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGcc > 2:222676/1‑150 (MQ=255) cAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGcc < 1:3134180/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 2:6271888/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 2:1679878/150‑1 (MQ=255) ccGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACg < 2:6871195/150‑1 (MQ=255) ccGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACg < 1:3857171/150‑1 (MQ=255) cGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACgg < 2:2163563/150‑1 (MQ=255) tGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 2:1910505/150‑1 (MQ=255) tGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa > 1:1225627/1‑150 (MQ=255) tGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 1:4997142/150‑1 (MQ=255) tGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 2:6654505/150‑1 (MQ=255) tACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGccccc < 2:2971161/140‑3 (MQ=255) tACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAgg > 2:3940355/1‑150 (MQ=255) aCCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt < 1:2666162/150‑1 (MQ=255) aCCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt < 1:5189305/150‑1 (MQ=255) aCCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt > 1:1347714/1‑150 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 2:1347714/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa > 1:441170/1‑150 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 1:567097/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 2:2291603/150‑1 (MQ=255) gTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGa > 2:3279611/1‑150 (MQ=255) gTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGa < 1:6313260/150‑1 (MQ=255) cataTAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGacac < 1:5982584/147‑1 (MQ=255) ggTTTCGCTACCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGTCCACGGATGAAAGGTTAGACACTAATGa < 2:2664397/150‑1 (MQ=255) gTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAg < 1:1472129/150‑1 (MQ=255) gTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAg > 2:3626293/1‑150 (MQ=255) tttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGt > 1:6779216/1‑150 (MQ=255) tttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGt > 1:6094208/1‑150 (MQ=255) tCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTgg > 2:4303890/1‑150 (MQ=255) gCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGcc < 2:5174453/150‑1 (MQ=255) gCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGcc > 1:1187976/1‑150 (MQ=255) gCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGc > 1:91759/1‑150 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCa < 1:2374123/150‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCa < 1:1956367/150‑1 (MQ=255) cGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAAt < 2:4131938/150‑1 (MQ=255) cGGTGGACTTGAAGAACCCGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGa < 1:5760990/150‑1 (MQ=255) cGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGa < 1:2974033/150‑1 (MQ=255) ggTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGAt < 2:6547472/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 1:4007056/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 1:2124571/150‑1 (MQ=255) gACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGt < 2:4789033/150‑1 (MQ=255) cTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGc > 2:2923996/1‑150 (MQ=255) ttGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCt > 1:420624/1‑150 (MQ=255) gaagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCg > 2:3728635/1‑150 (MQ=255) gaagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCg > 1:275487/1‑150 (MQ=255) gaagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCg > 2:5659718/1‑150 (MQ=255) cagaaCACGCCCCAGTCCCCGGTGTACTTCAGCGGGATGTCCCCTCAGCCGGTAGTGTCACGGGCACCGTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGt < 2:6753458/149‑1 (MQ=255) aagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGt > 2:1847339/1‑150 (MQ=255) agaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTg < 2:4419037/150‑1 (MQ=255) agaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTg > 1:3602344/1‑150 (MQ=255) gaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGa < 2:3537116/150‑1 (MQ=255) aaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAg > 1:2932129/1‑150 (MQ=255) aaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAg > 2:3877543/1‑150 (MQ=255) gCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCa > 2:6409791/1‑150 (MQ=255) ccccAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAg < 2:5808776/150‑1 (MQ=255) cccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAgg > 1:5226348/1‑150 (MQ=255) cccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAgg > 2:156389/1‑150 (MQ=255) ccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGc > 2:4546399/1‑150 (MQ=255) cagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGcc > 1:2410474/1‑150 (MQ=255) cagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGcc > 2:3423040/1‑150 (MQ=255) agtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTAttt > 1:2621080/1‑150 (MQ=255) gtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTa < 2:600096/150‑1 (MQ=255) ttGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTAc > 1:4975356/1‑150 (MQ=255) tGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACt < 1:2007283/150‑1 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 2:1078532/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGAAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 2:4963091/1‑150 (MQ=255) gggATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGa > 1:4607436/1‑150 (MQ=255) gggATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGa < 2:3035859/150‑1 (MQ=255) ggATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGaa > 1:6196114/1‑101 (MQ=255) ggATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGaa < 2:6196114/101‑1 (MQ=255) ggATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGAc < 1:3939564/150‑1 (MQ=255) gATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGAct > 2:3761446/1‑150 (MQ=255) aTTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGActt < 2:785424/150‑1 (MQ=255) tttCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGActtc > 1:1382313/1‑150 (MQ=255) ccccTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACttcttc < 1:459417/150‑1 (MQ=255) cTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCg > 2:4200065/1‑150 (MQ=255) cTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCg > 2:1117038/1‑150 (MQ=255) cTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCg > 2:1340218/1‑150 (MQ=255) aGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTcc > 1:4703822/1‑150 (MQ=255) ttCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgt < 2:5933385/150‑1 (MQ=255) tCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtc < 1:4482019/150‑1 (MQ=255) tCACGGGCACCTTCGAGCAACCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtc < 1:2470471/150‑1 (MQ=255) gggCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggtc < 2:1974120/150‑1 (MQ=255) cTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggctcg > 1:5345636/1‑150 (MQ=255) ctttcATCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCg > 1:1015653/5‑150 (MQ=255) cGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCg < 1:4176320/150‑1 (MQ=255) gAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGa < 1:6762185/150‑1 (MQ=255) ttcATCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGAt > 2:1935/3‑150 (MQ=255) aGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGAt < 2:5433154/150‑1 (MQ=255) aGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGAt > 1:5399736/1‑150 (MQ=255) tCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCa < 1:702950/82‑1 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtttt > 2:4664338/1‑150 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtttt > 1:2570699/1‑150 (MQ=255) | CGATGGTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTT > NC_002947/1230280‑1230576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |