| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,397,882 | C→G | 18.7% | intergenic (+97/‑89) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,397,882 | 0 | C | G | 18.7% | 483.4 / 95.7 | 198 | intergenic (+97/‑89) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base C (82/68); new base G (28/9); total (119/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 199 total aligned reads displayed.
ACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGC > NC_002947/1397733‑1398030 | aCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTc < 2:2825572/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CAATTCaaa > 2:1565083/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAAt < 1:5165635/150‑1 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGAGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGTATT‑ACGCC‑CCTTTCAAAtg > 2:5541668/1‑150 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAAtgtg < 1:1494570/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggt < 2:4523831/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggt < 1:4843750/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggt < 2:24326/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATgtggtg < 1:248728/150‑1 (MQ=255) aaTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGc < 2:3276840/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCa < 1:6728393/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCa < 2:4442774/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCa < 2:2023201/150‑1 (MQ=255) tGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAAtgggcgtaa < 1:4694228/150‑8 (MQ=25) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAATACCGCGCCAACAGGGATT‑TCGCC‑CATTTCAAATTGGGTGGAggtcc > 1:2235927/1‑146 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCt < 2:4456657/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGGATT‑ACGCC‑CATTTCAAATGTGGTGCAGTAGCt > 2:3531789/1‑150 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGt < 2:6190019/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGt < 1:5600757/150‑1 (MQ=21) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGt < 1:2318609/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:4179345/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 1:6566547/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTa < 2:6511708/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTAATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTa < 1:4479374/150‑1 (MQ=18) tgtCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:4857895/148‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 2:576410/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:1610371/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:2552969/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 2:5266483/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 1:3561931/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGc < 2:5318170/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 2:2881534/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:544246/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 2:2753982/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:1205910/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:6118193/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTACAGGTATT‑ACGCC‑CAATTAAAATGTTGTGCAGGAACGGTAGGAGCggg > 2:140582/1‑150 (MQ=255) agaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGt < 2:2398604/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCGTTAGCCGGTAAACCCCCGCCGAAAGGTGGA‑AAGCC‑CCTTTGAAAAGTTGGGCAGTAACGGTCGGAGGGGGTTG‑‑Aca > 1:3883537/1‑149 (MQ=255) tGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑Accc < 1:6325113/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCcgc < 1:5171125/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCcgc < 2:6020216/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGGATT‑ACGCC‑CAATTCAAATGTGGGGCACTACCGGTAGGCGCGGGGTT‑‑ACCcgc > 2:6465400/1‑150 (MQ=38) aaaaCCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTACGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCcgcg < 2:5161397/150‑1 (MQ=255) cTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGAAAACCCCACCAACAGGTATT‑AAGCC‑CAATTAAAAATTGGTGGAGTAACAGTAGGAGGGGGTTT‑‑AACCCCGAAAgg > 2:216862/1‑150 (MQ=255) tCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGGAAGCCCCGCCGACAGGGATT‑AAGCC‑CCGTTAAAAAGTGGTGCACTAACGGGTGGGGCGGGTTT‑‑ACCCGCGAAAggg > 1:6812946/1‑150 (MQ=255) gATTTGGCAGTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGATT‑ACGCC‑CATTTCAAATGTGGTGCGGTTCCGGTAGGAGCGGGGTT‑‑ACCCGCGAAAGGGCCGGCGCAggt > 2:3914726/1‑148 (MQ=37) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGt > 2:2495179/1‑97 (MQ=255) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGAAACCCCCGCCAACAAGGATTAACCCC‑CATTAAAAAT‑TGGTGCAGTAACGGTGGGAGCGGGGTT‑‑AACCCCCAAAGGGCCGGCGCCCGTTGTTGAGATGCAGCAtt > 2:720432/1‑150 (MQ=255) tGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCAACAGGTATT‑ACGCC‑CCGTTGAAATTTGGTGGAGTAACGGTAGGGGCCGGTTT‑‑ACCCGCGCAAGGGCCGGCGCAGGTTGTTGAGATGCATGAatttttag > 2:4800674/1‑148 (MQ=255) gTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CTTTTCAATTGTGGTGCAGTACCTGTTGGCGCGGTTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACggg < 2:1037973/150‑1 (MQ=38) cGGCCCTTTCGCGGGTAAAACCCCACCTACAGGTAGT‑ACGCC‑CAATTGAAATTTGGTGCAGTACCGGGGGGAGCGGGTTT‑‑ACCCCCCCAACGGCCCGGGGCGTTTGTAGGGATGGATAATTTTTTCGACGGGCGTTATGACTCTGGttgg > 2:2965273/1‑148 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGGGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGCAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTa > 2:5996285/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACTGGTATT‑ACGCC‑CTTTTCAATTGTGGTGCAGTACCTGTTGGCGGGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATc < 2:6831517/150‑1 (MQ=38) gagcgGGTTTACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCg > 1:4606424/3‑150 (MQ=255) aaCCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCt > 1:2127809/1‑150 (MQ=255) aCCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCGTTATGACTCTGATTCTAGGTATCGACCCCGGCTc > 1:833785/1‑150 (MQ=255) ccGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:4103863/1‑150 (MQ=255) ccGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:5870752/1‑150 (MQ=255) ccGCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCGGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTGGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:3443939/1‑150 (MQ=18) gCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 1:3984066/1‑150 (MQ=255) gCTCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCACAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 1:603342/1‑150 (MQ=17) tCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:826251/1‑150 (MQ=255) tCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGGTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCGTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:3866540/1‑150 (MQ=255) tCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:1663180/1‑150 (MQ=18) tCCTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 1:5314115/1‑150 (MQ=18) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:3345518/1‑150 (MQ=255) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:1278082/1‑150 (MQ=255) cTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:4701869/1‑150 (MQ=255) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:3082291/1‑150 (MQ=18) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:6745984/1‑150 (MQ=18) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:4282644/1‑150 (MQ=18) cTACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGGAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:1532731/1‑150 (MQ=18) tACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:3179116/1‑150 (MQ=255) tACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:6389840/1‑150 (MQ=255) tACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:5503756/1‑150 (MQ=255) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:1198156/1‑150 (MQ=21) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:4977791/1‑150 (MQ=21) tACAGGTACT‑GCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:6317736/1‑150 (MQ=21) aCAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 2:2097964/1‑150 (MQ=255) cAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCg > 2:2892424/1‑150 (MQ=255) aGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 1:1833665/1‑150 (MQ=255) ggTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGc > 2:6737572/1‑150 (MQ=255) gTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:3455929/1‑150 (MQ=255) tt‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg > 1:4442348/1‑150 (MQ=255) tt‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg > 2:5747005/1‑150 (MQ=255) ttccccc‑cTTTTCATCTGTGGTGCCGGACGTGTAGGCGCGGGTTA‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATg < 1:2707158/145‑1 (MQ=255) cGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGAGTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCg > 1:627455/1‑150 (MQ=255) gCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt > 1:1357502/1‑150 (MQ=255) cc‑cATTTCAATTGGGGGTCACTACCGGTTCG‑GCGGGTTTTCACCCGCGAATGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt < 1:5360580/150‑1 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 1:5010118/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 1:3371563/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 1:1946557/1‑150 (MQ=255) c‑cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTA‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 2:537569/1‑150 (MQ=255) c‑cAGTTCAAATGTGGAGCAGTACCTGGAGGAGCGGGTTT‑‑ACCCGCGAAAGGGACGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTATGATTCTAGGTCTCGACCCCGGCTCGCGCATCACAGGCTATGGCGTgg > 2:4601466/1‑150 (MQ=255) cATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGt > 2:1770306/1‑150 (MQ=255) tttCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTAc > 2:6668213/1‑150 (MQ=255) tttCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTAc > 1:1842829/1‑150 (MQ=255) tCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGc > 2:3821788/1‑150 (MQ=255) tCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCAGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGc > 1:5972125/1‑150 (MQ=255) | ACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATT‑ACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTT‑‑ACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGC > NC_002947/1397733‑1398030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |