| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,414,061 | A→T | 10.9% | intergenic (+50/‑225) | PP_1230 → / → nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,414,061 | 0 | A | T | 10.9% | 435.8 / 9.7 | 164 | intergenic (+50/‑225) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Reads supporting (aligned to +/- strand): ref base A (97/43); new base T (2/19); total (102/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.97e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 164 total aligned reads displayed.
CCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCG > NC_002947/1413914‑1414209 | ccGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGAtt < 2:2734987/150‑1 (MQ=255) aTGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTc‑a < 1:2857518/150‑1 (MQ=255) ggCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTc‑aca < 1:6413746/150‑1 (MQ=255) ggCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTc‑aca < 1:359880/150‑1 (MQ=255) ggCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTc‑aca < 2:2148104/150‑1 (MQ=255) cATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAgt < 2:6542596/150‑1 (MQ=255) cATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAgt < 1:2634978/150‑1 (MQ=255) cATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCGACGAGGATTTC‑ACAgt > 1:451200/1‑150 (MQ=255) tGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAgtgt > 1:4728579/1‑150 (MQ=255) tGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAgtgt < 2:2215111/150‑1 (MQ=255) ggTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTa > 2:1644528/1‑150 (MQ=255) ggTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTCC‑ACAGTGTa > 2:1409324/1‑150 (MQ=255) gTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAg < 2:5308228/150‑1 (MQ=255) gTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCCCTCCTACGAGGGTTTC‑ACACTGTAg > 1:5884371/1‑150 (MQ=255) cGATTTCATGGTCCGAAAAATGACCGTTGAAGAATTTGCCTTGTTCATGGCGGCTCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAggg < 1:1177757/150‑1 (MQ=39) cGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGTACCCGCACCAACGAGGATTTA‑ACAGTGTTggg > 1:199433/1‑150 (MQ=255) cGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAggg < 1:1177681/150‑1 (MQ=255) ttCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCgg < 1:3955491/150‑1 (MQ=255) ttCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCgg > 2:382221/1‑150 (MQ=255) ttCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCgg > 2:1525371/1‑150 (MQ=255) ttCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCgg < 1:5869266/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 2:3401331/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 2:57721/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 2:832737/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 1:4150573/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 1:2326950/150‑1 (MQ=255) aaTGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGtt < 2:173127/150‑1 (MQ=255) tGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCa < 1:4399504/150‑1 (MQ=255) ggCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCAc < 1:3097058/150‑1 (MQ=255) ggCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCAc < 1:3095540/150‑1 (MQ=255) gCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACCGTGTAGGGGCGGGTTCAcc > 2:4377551/1‑150 (MQ=255) gAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTCC‑ACAGTGTAGGGGCGGGTTCACCcgc < 2:2046913/150‑1 (MQ=255) gAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCAACGAGGATTTC‑ACAGTGTAGGGGCGGGGTCACCcgc > 1:3242823/1‑150 (MQ=255) aaaTGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGaa > 2:2819411/1‑150 (MQ=255) aaaTGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGaa > 1:2775379/1‑150 (MQ=255) gACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAgggg > 2:6287538/1‑150 (MQ=255) aCCTTTCAATAATTTGCAATGTTAATGGCGCCGCATCTGGGGGCCCTGTCGCCGCAGGGTTGATGTTTACTCCTGTTGCGGCATCTTCGCGGTTTAACCCCCTCATACCATTATTAC‑ACAGTCTAGGGGCGGTTAAACCCGCGAAGGGGc < 2:6200546/150‑1 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:3878667/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:5134530/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:5134572/1‑150 (MQ=255) atattttGCCTTGTTCTTGGCGGCGCATGTGGGGGCCCTGACGCCGCTGGGGTGATGGTTTCGCGTGTTGCGGCCTCTTCGGGGGTGAACCCGCGCCTACGAGTTTTTC‑ACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACaa < 2:1109927/146‑1 (MQ=255) gaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCTCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGGGTCGGGGCGGGTTCACCCGCGACGGGGCCCGCACAAg > 2:6763354/1‑150 (MQ=255) ttGCCTTGTTCTTGGCGGCGCATGTGGGGGCCCTGTCGCCGCTGGGGTGTTGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCGGCTCCTACGAGGTTTTC‑ACATTGTTGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACt < 2:2252362/150‑1 (MQ=255) ttgcttGGCGGCGATTGTGGGGGCCGTGGCGCCGCGGGGGTGATGGTTTCTCCTGTTGCGGCGACTTCGGGGTGGAACCCGCTCCTACTAGTTTTTC‑ACTGTGTTGGGGCGGTTTAACCCGCGAAGGGGCCCGCACAAGCACTACaaaaa < 2:4684816/145‑1 (MQ=255) ttccgggcggcGCTTGGGGGGCCCGTGACGCCGCCGGGGTGATGGTTTCTCCTGTGGCGCCGTCTGCGCGGTTGAACCCGCTCCTCCGCGTATGTC‑AACGTGTCGGGGCGGGTTCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAAc < 2:6006445/145‑1 (MQ=255) ggcggcGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGCAGGGGCCCGCACAAGCACTACAAAAACCCCtt > 2:275613/1‑150 (MQ=255) gggcgCTTGTGGGGGCCGTGGCGCGGCTGGGGTGTTGTTTCCGCGTTTTGGGGCGTCTGGGGGGGTCACCCCGCGCCTCCGTTTTTTAC‑ACTTTGTGGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTa < 2:1379403/149‑1 (MQ=255) cggcgCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGCACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTGTa > 2:6724779/1‑150 (MQ=255) ggcgCAGGTGGGGGCCCGGTCGCGGCTGGGTTGTGGTTTTCTCGTGTGGGGGCCTGGGGGGGGGTGAACCGGCCCCTCCGCGTTTTTC‑CCGTTGTTGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAg < 2:1926817/150‑1 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGt > 2:1475272/1‑150 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGt > 2:4938380/1‑150 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGGTCACCCGCGCAGGGGCCCGCACACGCCCTACAAAAACCCCGGTAGt > 2:5436336/1‑150 (MQ=39) gcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTaa > 2:2697218/1‑150 (MQ=255) cTGGGGGCCCTGTCGCCGCTGGGTTGATGTTTCCTCCTTTTGGGGCATCTTGGCGGGTGAACCCGCTCCTAGGCGTTTTTC‑ACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGc < 2:3385284/150‑1 (MQ=255) gggggCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTg > 2:466201/1‑150 (MQ=255) ggCCCTGTCGCAGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGTGTGAACCCGCTCAAACGAGGATTTA‑AAAGTGTAGGGGCGGGTTAAACCGCGAAGTGGCCCGCACAAAAACTACAAAAACACCATTAGTAATCGCTGGAt > 2:5926156/1‑150 (MQ=255) ccTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCATTAGTAATCGCTGGATTGt > 2:6395568/1‑150 (MQ=255) gTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTg > 2:6795155/1‑150 (MQ=255) ggcggctggggTGTTGTTTTCTCCTGTTGCGGCCCTTTGGGGTGTTAACCCGCTCCTACGTGTTTTAC‑ACTGTGTGGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTa < 1:4538466/143‑1 (MQ=255) cgccgcTGGGTTGATGTTTTCTCCTGTGGCGGCATCTTCGCGGGTCAACCCGCTCCTCCGTGGTTTTC‑ACCGTTTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTa < 2:516319/150‑1 (MQ=255) ggggTGTTGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTCCGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCg < 2:2150881/150‑1 (MQ=255) ggggTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATAGTCTGTAGCCTTCg > 2:5075464/1‑150 (MQ=255) ggggTGATGGTTTCTCCGGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTC‑ACCGTGTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCg < 2:2150903/150‑1 (MQ=255) gggTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTAAGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACAACAAAAACCCCATTAGTAATCGCGGGCTTGTCTGTAGCCTTCgg > 2:1759718/1‑150 (MQ=39) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACCGTGTAGGGGCGGGTTCACCCGCGCAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCGCCGat > 2:4012161/1‑150 (MQ=255) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACCGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCCCAAGCACTACAAAAAACCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGat > 2:2961277/1‑150 (MQ=255) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTCCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGat > 1:3314416/1‑150 (MQ=255) ctcCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACGACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGataata > 1:6752456/1‑150 (MQ=255) cTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCTTTAGTAATCGCGGGATTGTCTGTAGCCTTCGGCGTCCGATAATAATc > 2:3819352/1‑150 (MQ=255) tGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATcc < 2:3892998/150‑1 (MQ=255) tGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCGTCGGCCACCGATAATAATcc > 2:3367445/1‑150 (MQ=255) tGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCAC‑ACCAAAAACCCTGTAGTACTCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATCAAAATCcg > 2:5253103/1‑150 (MQ=38) ttGCGGCCTCTGGGGGGGTCACCCCGCCCCT‑CGGCGTTTTCAACTGTGTTGGGGGGGGTCCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCcgc < 2:1719843/150‑1 (MQ=255) ggCCTCGTCGCGGGTGACCCCGCTCCTCCGAGGATTTC‑ACAGTGTCGGGGCGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGccc < 2:4527118/150‑1 (MQ=255) ccTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCGTCGGCCTCCGATAATAATCCGCGCCCGc > 1:5601726/1‑150 (MQ=255) tctTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTGTAGTAATCGCTGGAGTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1082835/1‑150 (MQ=255) tctTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1154362/1‑150 (MQ=255) tctTCGCGGGTGAAACCGCTCCGACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATAGCTGGAATGTCTGTAGCCATCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1151256/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCATTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCagag > 2:1852486/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGGTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCATCGGCCTCCGATAATAATCCGCGCCCGCagag > 2:1162160/1‑150 (MQ=255) gcgGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGc > 1:3912727/1‑150 (MQ=255) tGAACCCGCTCCTACGAGGTTTTC‑ACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg < 2:2775379/150‑1 (MQ=255) tGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg > 2:1903496/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 1:1810282/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 1:6123849/1‑150 (MQ=255) cccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:5259090/1‑150 (MQ=255) cccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:5259174/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 2:3730987/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 1:6419218/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 1:6050232/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGATc > 2:3198262/1‑150 (MQ=255) cTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAAc > 2:4174883/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:2469868/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:5834696/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:1067437/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 1:5049377/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:6491949/1‑150 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 1:4785762/1‑150 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 1:5998836/1‑150 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAAACGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAAACCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 2:1235141/1‑150 (MQ=255) | CCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCG > NC_002947/1413914‑1414209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |