| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,414,073 | A→T | 12.7% | intergenic (+62/‑213) | PP_1230 → / → nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,414,073 | 0 | A | T | 12.7% | 432.0 / 11.0 | 169 | intergenic (+62/‑213) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Reads supporting (aligned to +/- strand): ref base A (106/31); new base T (3/14); total (111/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.14e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGC > NC_002947/1413924‑1414220 | ggTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTCC‑ACAGTGTa > 2:1409324/1‑150 (MQ=255) gTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCCCTCCTACGAGGGTTTC‑ACACTGTAg > 1:5884371/1‑150 (MQ=255) cGATTTCATGGTCCGAAAAATGACCGTTGAAGAATTTGCCTTGTTCATGGCGGCTCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAggg < 1:1177757/150‑1 (MQ=39) cGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGTACCCGCACCAACGAGGATTTA‑ACAGTGTTggg > 1:199433/1‑150 (MQ=255) cGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAggg < 1:1177681/150‑1 (MQ=255) ttCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCgg > 2:382221/1‑150 (MQ=255) ttCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCgg < 1:4543405/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 2:832737/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 2:57721/150‑1 (MQ=255) tCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCggg < 2:3401331/150‑1 (MQ=255) aaTGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGtt < 2:173127/150‑1 (MQ=255) aaTGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGtt > 2:6421115/1‑150 (MQ=255) tGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCa < 1:4399504/150‑1 (MQ=255) ggCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCAc < 1:3095540/150‑1 (MQ=255) gCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACCGTGTAGGGGCGGGTTCAcc > 2:4377551/1‑150 (MQ=255) gAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTCC‑ACAGTGTAGGGGCGGGTTCACCcgc < 2:2046913/150‑1 (MQ=255) gAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCAACGAGGATTTC‑ACAGTGTAGGGGCGGGGTCACCcgc > 1:3242823/1‑150 (MQ=255) aaaTGACCGTTGAATATTTTGCCATGTTCATGGCGGCGCTTCTGGGGGCCCTGTGGCCGCTGGGTTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGTGTTTTTC‑ACTGTGTAGGGGCGGTTTCACCCGCGaa < 2:319846/150‑1 (MQ=255) aCCTTTCAATAATTTGCAATGTTAATGGCGCCGCATCTGGGGGCCCTGTCGCCGCAGGGTTGATGTTTACTCCTGTTGCGGCATCTTCGCGGTTTAACCCCCTCATACCATTATTAC‑ACAGTCTAGGGGCGGTTAAACCCGCGAAGGGGc < 2:6200546/150‑1 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:5134530/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:3878667/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:5134572/1‑150 (MQ=255) atattttGCCTTGTTCTTGGCGGCGCATGTGGGGGCCCTGACGCCGCTGGGGTGATGGTTTCGCGTGTTGCGGCCTCTTCGGGGGTGAACCCGCGCCTACGAGTTTTTC‑ACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACaa < 2:1109927/146‑1 (MQ=255) gaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCTCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGGGTCGGGGCGGGTTCACCCGCGACGGGGCCCGCACAAg > 2:6763354/1‑150 (MQ=255) gaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCTCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGAGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAg > 2:6763060/1‑150 (MQ=255) gaaTTTGCCATGTTCAGGGCGGCGCATGTGGGGGCCGTGGCGCCGCTGGGGTGATGGTTTCTCGTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGTTTTC‑ACAGTGTCGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAg < 2:1092658/150‑1 (MQ=37) ttGCCTTGTTCTTGGCGGCGCATGTGGGGGCCCTGTCGCCGCTGGGGTGTTGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCGGCTCCTACGAGGTTTTC‑ACATTGTTGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACt < 2:2252362/150‑1 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACaaa > 2:2824319/1‑150 (MQ=255) ttgcttGGCGGCGATTGTGGGGGCCGTGGCGCCGCGGGGGTGATGGTTTCTCCTGTTGCGGCGACTTCGGGGTGGAACCCGCTCCTACTAGTTTTTC‑ACTGTGTTGGGGCGGTTTAACCCGCGAAGGGGCCCGCACAAGCACTACaaaaa < 2:4684816/145‑1 (MQ=255) ttccgggcggcGCTTGGGGGGCCCGTGACGCCGCCGGGGTGATGGTTTCTCCTGTGGCGCCGTCTGCGCGGTTGAACCCGCTCCTCCGCGTATGTC‑AACGTGTCGGGGCGGGTTCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAAc < 2:6006445/145‑1 (MQ=255) aTGGCGGCGCATCAGGGGGCCCTGTCGCCGCTGGGGTGTTGGTTTCCCCTGTTGCGGCCTCTGCGCGGGTGAACCCGCTCCTACGAGTATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAcccc < 2:3803799/150‑1 (MQ=255) ggcggcGCTTGGGGGGGCCGTGGCGCCGCCGGGGTTTGGGTTTCTCGTGTGGCGGCCTCTTCGCGGGTCACCCCGCTCCCCCGCGTTTTCC‑ACTGTGTGGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCtt < 2:6561036/150‑1 (MQ=255) gggcgCTTGTGGGGGCCGTGGCGCGGCTGGGGTGTTGTTTCCGCGTTTTGGGGCGTCTGGGGGGGTCACCCCGCGCCTCCGTTTTTTAC‑ACTTTGTGGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTa < 2:1379403/149‑1 (MQ=255) ggcgCAGGTGGGGGCCCGGTCGCGGCTGGGTTGTGGTTTTCTCGTGTGGGGGCCTGGGGGGGGGTGAACCGGCCCCTCCGCGTTTTTC‑CCGTTGTTGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAg < 2:1926817/150‑1 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGt > 2:4938380/1‑150 (MQ=255) gcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTaa > 2:2697218/1‑150 (MQ=255) gcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGGGAACCCCCGCCAACGAGGTTTTA‑AAACAGTAGGGGCGGGGTAACCCCCGAAAGGGCCCCCACAAGCACAAAAAAAAACCCAGTAGTaa > 1:318204/1‑150 (MQ=255) cTGGGGGCCCTGTCGCCGCTGGGTTGATGTTTCCTCCTTTTGGGGCATCTTGGCGGGTGAACCCGCTCCTAGGCGTTTTTC‑ACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGc < 2:3385284/150‑1 (MQ=255) ccTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGt > 2:6820723/1‑150 (MQ=255) ccTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCATTAGTAATCGCTGGATTGt > 2:6395568/1‑150 (MQ=255) ggcggctggggTGTTGTTTTCTCCTGTTGCGGCCCTTTGGGGTGTTAACCCGCTCCTACGTGTTTTAC‑ACTGTGTGGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTa < 1:4538466/143‑1 (MQ=255) cgccgcTGGGTTGATGTTTTCTCCTGTGGCGGCATCTTCGCGGGTCAACCCGCTCCTCCGTGGTTTTC‑ACCGTTTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTa < 2:516319/150‑1 (MQ=255) ggggTGTTGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTCCGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCg < 2:2150881/150‑1 (MQ=255) ggggTGATGGTTTCTCCGGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTC‑ACCGTGTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCg < 2:2150903/150‑1 (MQ=255) gggTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTAAGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACAACAAAAACCCCATTAGTAATCGCGGGCTTGTCTGTAGCCTTCgg > 2:1759718/1‑150 (MQ=39) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACCGTGTAGGGGCGGGTTCACCCGCGCAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCGCCGat > 2:4012161/1‑150 (MQ=255) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACCGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCCCAAGCACTACAAAAAACCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGat > 2:2961277/1‑150 (MQ=255) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTCCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGat > 1:3314416/1‑150 (MQ=255) ctcCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACGACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGataata > 1:6752456/1‑150 (MQ=255) tGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATcc < 2:3892998/150‑1 (MQ=255) tGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGGAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACGACAAAAAACCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATcc > 2:4629655/1‑150 (MQ=255) ttGCGGCCTCTGGGGGGGTCACCCCGCCCCT‑CGGCGTTTTCAACTGTGTTGGGGGGGGTCCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCcgc < 2:1719843/150‑1 (MQ=255) ggCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTGTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGccc > 2:5297656/1‑150 (MQ=255) ccTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCGTCGGCCTCCGATAATAATCCGCGCCCGc > 1:5601726/1‑150 (MQ=255) tctTCGCGGGTGAAACCGCTCCGACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATAGCTGGAATGTCTGTAGCCATCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1151256/1‑150 (MQ=255) ctTCGCGGGTGACCCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCaga < 2:3384253/150‑1 (MQ=255) ttCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATAGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCagag > 2:1161949/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCATTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCagag > 2:1852486/1‑150 (MQ=255) gcgGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGc > 1:3912727/1‑150 (MQ=255) ggTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGt > 1:695424/1‑150 (MQ=255) gTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCAGCGCCCGCAGAGGGCCGTg > 2:5065999/1‑150 (MQ=255) gTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTg > 1:4804253/1‑150 (MQ=255) ttaccccGCTCCTCCGTGTTTTTC‑ACTGTGTGGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg < 1:2819411/146‑1 (MQ=255) tGAACCCGCTCCTACGAGGTTTTC‑ACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg < 2:2775379/150‑1 (MQ=255) tGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg > 2:1903496/1‑150 (MQ=255) gAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGc > 1:5083687/1‑150 (MQ=255) accccGCTCCTCCGTGTTTTTC‑CCTGTGTGGGGGGGGTTACCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCg < 1:2538510/148‑1 (MQ=255) aCCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 2:2747145/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 1:6123849/1‑150 (MQ=255) cccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:385165/1‑150 (MQ=255) cccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:5259174/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 1:6050232/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 1:6419218/1‑150 (MQ=255) ccGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 2:3730987/1‑150 (MQ=255) cGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCa > 2:6305286/1‑150 (MQ=255) cTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAAc > 2:4174883/1‑150 (MQ=255) tCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACa > 1:5864712/1‑150 (MQ=255) tACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGc > 2:1589755/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGTCGTGTTCACCCGCGAAGGGGCCCCCACAAGCACTACAAAAACACCTTTAGTAATCGCTGGCTTGTCTGTAGCCTACGGCCTCCGATCATAATCCGCGCCCGCAGAGGGCCGTGGCCGTCCCCATGCCGt > 2:5953291/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:2469868/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 1:4076638/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:5834696/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:1067437/1‑150 (MQ=255) gAGGATTTC‑ACAGTGTAGGGGCGGGCTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:5344912/1‑150 (MQ=255) ggttttC‑ACAGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTcc < 2:1596560/147‑1 (MQ=255) ggATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTcc > 2:2174526/1‑150 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGc < 2:1501453/133‑1 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGc > 1:1501453/1‑133 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 1:5998836/1‑150 (MQ=255) gATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAAACGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAAACCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 2:1235141/1‑150 (MQ=255) tttC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGc > 2:1155415/1‑150 (MQ=255) tttC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGCCAACATGCCGTCCGGc > 2:1454276/1‑150 (MQ=255) c‑acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAcc > 2:4456773/1‑150 (MQ=255) acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTTTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAccc > 1:1903871/1‑150 (MQ=255) acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAccc > 2:5749727/1‑150 (MQ=255) acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGACTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAccc > 1:2233411/1‑150 (MQ=255) tgtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAg > 1:2537076/1‑150 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc > 2:2761043/1‑150 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc < 1:5134572/150‑1 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc < 1:5134530/150‑1 (MQ=255) | GGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTC‑ACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGC > NC_002947/1413924‑1414220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |