| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,414,084 | C→A | 6.2% | intergenic (+73/‑202) | PP_1230 → / → nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,414,084 | 0 | C | A | 6.2% | 499.9 / 13.2 | 169 | intergenic (+73/‑202) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Reads supporting (aligned to +/- strand): ref base C (108/49); new base A (9/3); total (117/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
ATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGCCA > NC_002947/1413935‑1414230 | ggCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCAc < 1:3095540/150‑1 (MQ=255) gAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTCCACAGTGTAGGGGCGGGTTCACCcgc < 2:2046913/150‑1 (MQ=255) aaaTGACCGTTGAATATTTTGCCATGTTCATGGCGGCGCTTCTGGGGGCCCTGTGGCCGCTGGGTTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGTGTTTTTCACTGTGTAGGGGCGGTTTCACCCGCGaa < 2:319846/150‑1 (MQ=255) aaaTGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGaa > 2:2819411/1‑150 (MQ=255) gACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAgggg > 2:6287538/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:5134530/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:5134572/1‑150 (MQ=255) gTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCg > 2:3878667/1‑150 (MQ=255) atattttGCCTTGTTCTTGGCGGCGCATGTGGGGGCCCTGACGCCGCTGGGGTGATGGTTTCGCGTGTTGCGGCCTCTTCGGGGGTGAACCCGCGCCTACGAGTTTTTCACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACaa < 2:1109927/146‑1 (MQ=255) gaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCTCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGAGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAg > 2:6763060/1‑150 (MQ=255) cATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGGGAACCCCCTCCTAAGAGGCTTTGACAATGTGGGGGCGGGGTAACCCCCGAAAGGGCCCGCACAACCaagaaaa > 1:1995158/1‑144 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACaaa > 2:2824319/1‑150 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACaaa > 2:6056519/1‑150 (MQ=255) gTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACaaaaa > 2:1384177/1‑150 (MQ=255) ttccgggcggcGCTTGGGGGGCCCGTGACGCCGCCGGGGTGATGGTTTCTCCTGTGGCGCCGTCTGCGCGGTTGAACCCGCTCCTCCGCGTATGTCAACGTGTCGGGGCGGGTTCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAAc < 2:6006445/145‑1 (MQ=255) tCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGGAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACaaaaaac > 2:3606207/1‑148 (MQ=255) aTGGCGGCGCATCAGGGGGCCCTGTCGCCGCTGGGGTGTTGGTTTCCCCTGTTGCGGCCTCTGCGCGGGTGAACCCGCTCCTACGAGTATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAcccc < 2:3803799/150‑1 (MQ=255) gggcgCTTGTGGGGGCCGTGGCGCGGCTGGGGTGTTGTTTCCGCGTTTTGGGGCGTCTGGGGGGGTCACCCCGCGCCTCCGTTTTTTACACTTTGTGGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTa < 2:1379403/149‑1 (MQ=255) cggcgCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGCACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTGTa > 2:6724779/1‑150 (MQ=255) ggcgCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAACCACTACAAAAACCCCTTTAg > 2:1721420/1‑150 (MQ=255) ggcgCAGGTGGGGGCCCGGTCGCGGCTGGGTTGTGGTTTTCTCGTGTGGGGGCCTGGGGGGGGGTGAACCGGCCCCTCCGCGTTTTTCCCGTTGTTGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAg < 2:1926817/150‑1 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGt > 2:1475272/1‑150 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGt > 2:4938380/1‑150 (MQ=255) gcgcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGGTCACCCGCGCAGGGGCCCGCACACGCCCTACAAAAACCCCGGTAGt > 2:5436336/1‑150 (MQ=39) gcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTaa > 2:2697218/1‑150 (MQ=255) gcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGGGAACCCCCGCCAACGAGGTTTTAAAACAGTAGGGGCGGGGTAACCCCCGAAAGGGCCCCCACAAGCACAAAAAAAAACCCAGTAGTaa > 1:318204/1‑150 (MQ=255) cTGGGGGCCCTGTCGCCGCTGGGTTGATGTTTCCTCCTTTTGGGGCATCTTGGCGGGTGAACCCGCTCCTAGGCGTTTTTCACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGc < 2:3385284/150‑1 (MQ=255) gggggCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTg > 2:466201/1‑150 (MQ=255) gggggCCCTGCGGCGGCTGGGGTGTTGGTTTCTCCTGTTGGGGCCTCTGCGCGGGTGAACCCGCTCCTACGCGGATTTCCCAGTGTCGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTg < 2:2057127/150‑1 (MQ=255) ggCCCTGTCGCAGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGTGTGAACCCGCTCAAACGAGGATTTAAAAGTGTAGGGGCGGGTTAAACCGCGAAGTGGCCCGCACAAAAACTACAAAAACACCATTAGTAATCGCTGGAt > 2:5926156/1‑150 (MQ=255) gTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTg > 2:6795155/1‑150 (MQ=255) cgccgcTGGGTTGATGTTTTCTCCTGTGGCGGCATCTTCGCGGGTCAACCCGCTCCTCCGTGGTTTTCACCGTTTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTa < 2:516319/150‑1 (MQ=255) cgccgcTGGGGTGAGGGTTTCTCCTGTGGCGCCCTGTGCGGGGGTGAACCCGCGCCTACGCGTTTTTCACAGTGTAGGGGCGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTa < 2:5805344/150‑1 (MQ=255) ggggTGTTGGTTTCTCCTGTGGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCCCAGTGTTGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCg < 2:2150898/150‑1 (MQ=39) gggTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTAAGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACAACAAAAACCCCATTAGTAATCGCGGGCTTGTCTGTAGCCTTCgg > 2:1759718/1‑150 (MQ=39) aTGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCGACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACAAAAAAAAACCCTTTAGTAATAGCTGGATTGTATGTAGCCTTCGGCCTcc > 1:4527118/1‑150 (MQ=39) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTCCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGat > 1:3314416/1‑150 (MQ=255) ctcCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACGACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGataata > 1:6752456/1‑150 (MQ=255) cTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCTTTAGTAATCGCGGGATTGTCTGTAGCCTTCGGCGTCCGATAATAATc > 2:3819352/1‑150 (MQ=255) tGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCGTCGGCCACCGATAATAATcc > 2:3367445/1‑150 (MQ=255) ggggCCTCTTCGGGGGTGCCCCCGCGCGTCCGTGGAGTTCACTGTGTTGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCgcgc < 2:4267384/148‑1 (MQ=255) ggCCTCGTCGCGGGTGACCCCGCTCCTCCGAGGATTTCACAGTGTCGGGGCGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGccc < 2:4527118/150‑1 (MQ=255) gtaggagcgGGTTCACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCa > 1:5261106/7‑150 (MQ=255) tctTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTGTAGTAATCGCTGGAGTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1082835/1‑150 (MQ=255) tctTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1154362/1‑150 (MQ=255) tctTCGCGGGTGAAACCGCTCCGACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATAGCTGGAATGTCTGTAGCCATCGGCCTCCGATAATAATCCGCGCCCGCag > 2:1151256/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATAGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCagag > 2:1161949/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCATTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCagag > 2:1852486/1‑150 (MQ=255) ggTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGt > 1:695424/1‑150 (MQ=255) gTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCAGCGCCCGCAGAGGGCCGTg > 2:5065999/1‑150 (MQ=255) ttaccccGCTCCTCCGTGTTTTTCACTGTGTGGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg < 1:2819411/146‑1 (MQ=255) tGAACCCGCTCCTACGAGGTTTTCACTGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg < 2:2775379/150‑1 (MQ=255) tGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTgg > 2:1903496/1‑150 (MQ=255) accccGCTCCTCCGTGTTTTTCCCTGTGTGGGGGGGGTTACCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCg < 1:2538510/148‑1 (MQ=255) aCCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 1:6123849/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 2:2747145/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 1:1810282/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:385165/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:5259090/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:6101624/1‑150 (MQ=255) ccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 1:6419218/1‑150 (MQ=255) ccGCTCCGACGCGGATGCCACTGGGGGGGGGCGGTTACCCCCGCGAAGGGGCCCGCACAAGCACTACAACAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc < 1:3269010/150‑1 (MQ=255) cTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAAc > 2:4174883/1‑150 (MQ=255) cTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAAc > 2:4174694/1‑150 (MQ=255) tCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACa > 1:5864712/1‑150 (MQ=255) tACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGc > 2:1589755/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:6491949/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 1:5049377/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 1:4076638/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:1067437/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:2469868/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGCTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:5344912/1‑150 (MQ=255) ggttttCACAGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTcc < 2:1596560/147‑1 (MQ=255) ggATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTcc > 2:2174526/1‑150 (MQ=255) gATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 1:4785762/1‑150 (MQ=255) gATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 1:5998836/1‑150 (MQ=255) gATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAAACGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAAACCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCg > 2:1235141/1‑150 (MQ=255) ccccctgtgtGGGGGGGGGTACCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCa < 1:1409324/144‑1 (MQ=255) cacaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAcc > 2:4456773/1‑150 (MQ=255) acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAccc > 2:2164213/1‑150 (MQ=255) acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGACTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAccc > 1:2233411/1‑150 (MQ=255) aGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCtt > 2:813122/1‑150 (MQ=255) gggtgggggggggTGCCCCCGCGCAGGGGCCCGCACAAGCCCTACAAAAACCCCTTTAGTCATCGCTGGTTTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTa < 2:5260576/145‑1 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc > 2:2761043/1‑150 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc < 1:5134572/150‑1 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc > 2:6306581/1‑150 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc < 1:5134530/150‑1 (MQ=255) cttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCg > 1:1425272/5‑150 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGAt < 1:2796741/63‑1 (MQ=37) ttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGa > 2:339028/4‑150 (MQ=255) ggggggggTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGa < 2:318204/150‑1 (MQ=255) ggggCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGa > 1:913173/1‑150 (MQ=255) gggCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGAt < 2:3242823/150‑1 (MQ=255) ggCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATc > 1:4224516/1‑150 (MQ=255) gCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCt > 2:4587960/1‑150 (MQ=255) gCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTATAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCt > 1:4550755/1‑150 (MQ=255) gCGGGTCCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCt < 1:6763354/150‑1 (MQ=255) cGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTg > 2:391517/1‑150 (MQ=255) gggTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGc > 1:5835590/1‑150 (MQ=255) gTTCCCCCGCGAAGGGGCCCGCACACGCACTACAAAAACCCCTTGAGTAATCGCTGGATTGTCTGGAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGCCa < 2:6307463/150‑1 (MQ=255) | ATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGCCA > NC_002947/1413935‑1414230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |