| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,448,105 | A→T | 11.0% | intergenic (‑87/+89) | ghrB ← / ← PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,448,105 | 0 | A | T | 11.0% | 390.6 / 2.9 | 167 | intergenic (‑87/+89) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (91/37); new base T (4/15); total (96/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.29e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 173 total aligned reads displayed.
TTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCT > NC_002947/1447956‑1448254 | tgctgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAg < 1:6687110/150‑1 (MQ=255) gctgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCACCTAAGGGGGGGCGCGGTGCCGTGTAgg > 1:5659350/1‑150 (MQ=255) ctgctgGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGa < 1:5734148/150‑1 (MQ=255) ctgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGa < 2:410739/150‑1 (MQ=255) ctgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGa < 2:3830781/150‑1 (MQ=255) ctgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGa < 2:5416529/150‑1 (MQ=255) gcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGc < 1:2896252/150‑1 (MQ=255) cAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCACCTACGGGGGGGCGCGGTGCCTTGTAGGAGCg > 1:6864929/1‑150 (MQ=255) aGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg < 2:2510861/150‑1 (MQ=255) ggCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg > 2:6699376/1‑150 (MQ=255) ggCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg < 2:4042516/150‑1 (MQ=255) ggCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg < 1:3145823/150‑1 (MQ=255) ggCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg < 2:1549630/150‑1 (MQ=255) ggCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCAACGGGGGGGCGCGGTGCCGTGTAGGAGCggg > 1:2177374/1‑150 (MQ=255) gCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGc < 1:3041046/150‑1 (MQ=255) gCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGc < 2:4433636/150‑1 (MQ=255) gTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCtt < 2:4529868/150‑1 (MQ=25) ttCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCTCCAACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCttt > 1:5950220/1‑149 (MQ=255) ggCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCAGCCCGCCCCGACGGGGGGGGGCGGGGGCGGGTGGGAGCGGGCGTGccc > 1:4701140/1‑150 (MQ=255) ggCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGccc > 2:1023378/1‑150 (MQ=255) gCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCACCAACGGGGGGGCGCGGTGCCGTGTTGGAGCGGGCGTGcccc > 1:4107178/1‑149 (MQ=255) cATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCcgcg > 2:2385970/1‑150 (MQ=255) tGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTATTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTACCTTCGGGGGCAAGCCCGCTCCTACACGGCACCGCGCCCCCCCTTAGGAGGGGGCTTGCCCGCGaa < 2:1970828/150‑1 (MQ=21) ggCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAg < 2:2800536/150‑1 (MQ=255) ggCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCACCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAg > 1:2210221/1‑150 (MQ=255) ggCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTGCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAg < 2:1657083/150‑1 (MQ=255) gTGATCCGGGTTACGGCCTGGAGGGTCTTTTTCTTCGGGCAACTTCTCTGCATGGGGGGGTGGGGCTGTGCTGGTCCCTTCGGGGGCACGCCCGATCCTAGGGGGGGGCGCGGGGCCTTTTAGGAGCGGGCTTGCCCGCGAAGGTGCCgg < 2:6281768/150‑1 (MQ=255) gATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCACCAAACGGGGGGCGCGGTGGCGTGTTGGGTCGGGCTTTGCCGCGAAGGTGCCCGaa > 1:6408565/1‑150 (MQ=255) aCGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCAAAGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAg > 1:4887998/1‑150 (MQ=255) ggCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGc > 2:501592/1‑150 (MQ=255) tGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCACCAACGGGGGGGCGCGGTGGCGTGTTGGTGCGGGCGTGCCCGCGAAGGTGGCGGAAAAGGCCaa > 1:1286072/1‑150 (MQ=255) cctggcgggTTTTTTTCCGCGGGCAACTCCTCTGCAGGGGGGGGGGGGGCGGGGCGGGTCCGTGCGGGGGCACGCCCGCGCCTCGGGGGGGGCGCGGGGCGTTGTCGGCGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 2:4729634/143‑1 (MQ=255) ccAGGACGGTGTTTTTCACCGCCAAACTTCGCTCCATGGCGGGGTGGGGGTGTGCGGGCCCCTGCGCGGGAAAGCCCGCACCTCCGGGGGGGCGGGGTGCGTTGTAGCAGCGGGATTCCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 2:3585700/150‑1 (MQ=255) tggAGGGTTTTTTCCAGGGGGCAATTTCTCTGCAGGGGGGGGGGGGGGTGTGCTGGGCCGTGGGCGGGCACGCCCGCTCCTCGGGGGGGGCGGGGTGCCTTGTGGGGGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATgg < 2:2041836/149‑1 (MQ=255) aGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATgg > 2:2702547/1‑150 (MQ=255) gACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGtt > 2:5048015/1‑150 (MQ=255) aggttttttttCTTGGGGAAAATTGTCTGCTGGGGGGGGGGGGGTTGTGGTGGTCCCTGGGCGGGAAAGCCCGCTCCTCGGGGGGGGCGGGTTGCTTTGTTGGCGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTa < 2:2581451/144‑1 (MQ=255) gTCTTTTTCATGGGGCAACTGCTCGGCTTGGGGGGGGGGGGGTGTGGTGGCCAAGGCGGGGCAAAGCCCGCTCCTCGGGGGGGGGGGGGTGCGTTTTTGGAGGGGGCTTCCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCa < 2:5833591/150‑1 (MQ=255) tttttttCTTGGGCCAACTCCCGTGCTTGGGGGGGGGGGGGTGTGGGGGCCCGTTGGGGGCCAAGCCGGCTCGTGGGGGGGGGGGGGGGGCTTTGTTGGCGGGGGTTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCaa < 1:904086/148‑1 (MQ=255) tttttCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCTCCGACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGTGCCGGAACAGGCGAAATAAATGGTTAGCAAcc > 1:1627507/1‑150 (MQ=255) tcccgggggCAAGTGCTCTGCCGGGGGGGGGGGGGCTGGGCGGGGCCCTTCGGGGGCACGCCGGCTCCTCGGGGGGGGGGGGGTGCCTTGTAGGAGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTAc < 2:3719068/144‑1 (MQ=255) aTCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCAt > 2:4140781/1‑150 (MQ=255) gggCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTGGGAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGt > 2:2913117/1‑150 (MQ=255) ggCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCCTTGTc > 2:4101330/1‑150 (MQ=255) gCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGtac > 2:3654258/1‑148 (MQ=255) gCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGGAGGAGCGGGCGTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAAGGTTAGCAACCTACCATTGTcc > 2:3654424/1‑150 (MQ=255) gCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCCTTGTcc > 2:1523407/1‑150 (MQ=255) ccaccTTCTGTGCTGGGGGGGGGGGGGGTGTGGTGGCCCCTTCGGGGCCACGCCCGCTCCTGGGGGGGGGGGGGGTGCTTTGTTGGCGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTcc < 1:501592/146‑1 (MQ=255) aCTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGCGCGGGCTTGCCCGCGCAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCGACCATTGTCCGcc > 2:331092/1‑150 (MQ=255) ctctGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCGACGGGGGGGCGCGGGGCCGTGTAGGTGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCg > 2:3174713/1‑150 (MQ=255) tctGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGc > 2:5383756/1‑150 (MQ=255) tctGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCAATGTCCGCCCCCGc > 1:4544475/1‑150 (MQ=255) tGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACCGGGGGGCGGGGTGCCGTGTAGGTGCGGGCTTGGCCGCGAAGGTGGCGGAACAGGCGAAAACAATGGTTAGCAACCTACCAGTGTCCGcccccccct > 1:3305689/1‑146 (MQ=255) tGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTAAGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGCAGGTGCCGGGACAGGCGAAATCACTGGTTAGCCACCTACCATTGTCCGCCCCCGcct > 2:5242605/1‑148 (MQ=39) aggggggggtgggggtgTGGGGGCCCCTGCGCGGGCACGCCCGCCCCTCGGGGGGGGGGGGGTGCCTTGTCGGCGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTgc < 2:5768617/145‑1 (MQ=255) cggCGGGGTGGGGCTGTGCTGGTCCCGGCGCGGGCAAGCCCGCCCCTCCGGGGGGGCGCGGTGCCTTGTTGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTgca < 2:2177374/149‑1 (MQ=255) gggggTGGGGCGGGGGTGGCCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTCGGCGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTgcagca < 2:6544850/149‑1 (MQ=255) gggggGTGTGCTGGCCCCGGGGGGGGCACGCCCGCCCCTGGGGGGGGGGGGGGGGCGTTGGCGGCGGGGGCTCCCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCttt < 1:367592/149‑1 (MQ=255) gggCGGTGCTGGCCCCTTCGGGGGCACGCCCGCCCCTCGGGGGGGGGGGGGTGCTTTGTGGGCGGGGGCTGCCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCttttt < 1:523337/150‑1 (MQ=255) gggtgtgGTGGTCCCTTGGGGGGCACGCCCGCTCCTCGGGGGGGGCGGGGTGCCTTTTAGGCGGGGGGTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTa < 2:356265/147‑1 (MQ=255) gCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGGAGGAGCGGGCGTGCCCGCGGAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGGCCGCCCCCGCAGTGGCGCAGCTTTTTAg > 2:4077577/1‑150 (MQ=255) tgCTGGCCCCTGCGCGGGCACGCCCGCTCCTAGGGGGGGGCGCGGTGCCTTGTCGGAGGGGGCTTCCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTgg < 2:2992700/150‑1 (MQ=255) cTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCa > 2:92098/1‑150 (MQ=255) ttggggggCACCCCCGCTCCTCGGGGGGGGCGGGGGGCATTTTTGGCGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCAc < 1:3398784/145‑1 (MQ=255) ttCGGGGCCAGGCCCGCTCGTGGGGGGGGGCGGGGTGCGTTGTAGGAGCGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCAc < 2:630802/150‑1 (MQ=255) tgcgggggCACGCCCGCTCCTCGGGGGGGGCGGGGTGCGTTGTCGGGGGGGGGTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCAc < 2:3105449/145‑1 (MQ=255) cgGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGa > 1:2815479/1‑150 (MQ=255) gggCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGAt > 1:3345423/1‑150 (MQ=255) ggCATGCCCGCTCCTCCGGGGGGGCGCGGTGCCTTGTTGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATg < 2:2210221/150‑1 (MQ=255) gccAAGCCCGCTCCTCGGGGGGGGCGCGGGGCCTTGTAGGCGCGGCCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATg < 2:186724/148‑1 (MQ=255) gcccgCCCGCTCCTCGGGGGGGGCGGGGTGCCTTGTCGGCGGGGGGTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATgg < 2:1589283/146‑1 (MQ=255) cgCCCGCTTCTCGGGGGGGGCGCGGTGCCTTGTTGGCGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGtt < 2:4096281/149‑1 (MQ=255) aGCCCGCTCCTCGGGGGGGGCGGGGTGCGTTGTCGGTGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGtt < 1:3914130/150‑1 (MQ=255) ccGCTCCTTGGGGGGGGCGGGGGGCCTTGTTGGCGCGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc < 1:1023378/150‑1 (MQ=255) ccGCTCCTCCGGGGGGGCGCGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc < 2:6208156/150‑1 (MQ=255) ccGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc > 2:6667710/1‑150 (MQ=255) ccGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc > 2:3461734/1‑150 (MQ=255) ccGCGCCTCGGGGGGGGCGGGGTGCCTTTTCGGCGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc < 1:1023339/150‑1 (MQ=255) ccGCGCCTCGGGGGGGGCGCGGTGCCTTGTCGGCGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc < 2:4701140/150‑1 (MQ=255) cTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGACCAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCt > 2:3884347/1‑150 (MQ=255) tACGGGGTGGCGCGCTGCCTAGAAGGAGCGGGCTTGCCCGCGAAGCAGCCGGAACAGGCGAAATCAATGGTTAGCAACATAACATTGTCCGCCCACGCATACAAGCAGCTATTTAGTAGGCGATCAGAAACAGATGGGTTTACAGGTCTg > 2:1400744/1‑150 (MQ=255) tACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTg > 2:823334/1‑150 (MQ=255) tACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTg > 1:871562/1‑150 (MQ=255) tACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTg > 2:510278/1‑150 (MQ=255) cggggggggCGGGGGGCCTGGTCGGCGCGGGCTGGCCCGCGAAGGTGCCGGACCAGGCGAAATCACGGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTCGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGc < 2:1476212/148‑1 (MQ=255) gggggggggggggTGCTTTGTCGGCGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGcc < 1:6603720/149‑1 (MQ=255) gggggggCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCt > 1:655946/1‑150 (MQ=255) gggggggCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCt > 2:635161/1‑150 (MQ=255) ggggggggggGCGTTGTAGGTGGGGGCGGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCAt < 2:129003/150‑1 (MQ=255) ggggCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCAt > 2:5895493/1‑150 (MQ=255) gcgGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGcgcg > 1:2606010/1‑150 (MQ=255) gcgGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGcgcg > 2:1367597/1‑150 (MQ=255) gcgGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGcgcg > 2:1005415/1‑150 (MQ=255) ggTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCtttt > 1:2107825/1‑100 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAAt > 1:1707046/1‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAAt > 1:1605464/1‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAAt > 1:1605352/1‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAAt > 1:4778851/1‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAAt > 1:539155/1‑150 (MQ=255) aGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATctct < 2:5594429/150‑1 (MQ=255) | TTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCT > NC_002947/1447956‑1448254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |