| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,154 | T→A | 5.2% | T474S (ACC→TCC) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,154 | 0 | T | A | 5.2% | 834.6 / 27.3 | 307 | T474S (ACC→TCC) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (157/119); new base A (3/12); total (166/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.51e-03 | |||||||||||
Only 100 of 310 total aligned reads displayed.
TCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1469005‑1469303 | ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCt > 1:2762139/1‑150 (MQ=255) ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCt > 1:6259824/1‑150 (MQ=255) aGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgcg > 2:2539048/1‑150 (MQ=255) aGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgcg < 1:3500969/150‑1 (MQ=255) gCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgcgc < 2:3867368/150‑1 (MQ=255) gCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTgcgc < 2:4863701/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTc < 2:1923420/144‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCa < 2:2586264/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCa > 2:5321762/1‑150 (MQ=255) cTTTTCGATCCCATGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCa < 1:1965385/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAg > 1:688652/1‑150 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAgg > 1:1225266/1‑150 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAgg > 1:293349/1‑150 (MQ=255) ttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGc > 1:3104560/1‑150 (MQ=255) ttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCGGCGCAGGc > 1:4716151/1‑150 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCAc < 1:3411563/150‑1 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACg > 2:342649/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACAAAACAAGGCCAACGCGAGCAGGGCGGGGCTGTAATTTCTTTTGAAATGGGTCTTGGGTCGCCTCACTGGCG‑TGCCTGCGGGGTCTGCGCAGGCACgg < 2:3048515/150‑1 (MQ=255) ccccTGTTTGTAACCGTGCGGCGGTCCCCGCGGGGGGTGCGCGGCACCACCAAACAAGGCCAAGGCGAGCTGGGGGGGGGTGTAATTTCTTTTGAAATGGGTCTTGGTTCGCCTCAGTGGCG‑TGCGGGCGCGGTCGGCGCCGGCACGGCg < 2:3154171/150‑1 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGa > 2:3544011/1‑150 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGa > 2:433901/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCG‑TGCCTGCGCAGACCGCGCAGGCaggccagt < 2:3581302/150‑8 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:2307268/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:5415203/1‑150 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:659871/1‑150 (MQ=255) tGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgt > 2:6523901/1‑150 (MQ=255) aagtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAgttgt > 2:2463064/2‑150 (MQ=255) agtaCCCCTGCGGCGTTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACGCGAGCTGGGCGGGGCTGGAAATTCGTTTGAAAAGGGCCATGGGTCGCCTCACTGGCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAgttgtt < 2:1097643/150‑1 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 1:1044967/1‑150 (MQ=255) cggggggggTACCCGCGGGGGGGGCGGGGCACCACCAAACACGGCAACCGCGTGCTGGGGGGGGGGGTAATTTGTTTTGAAATGGGTAATGGGTCGCCTC‑CGGGCCGTGCCGGGGGGGTCTGGCAAGGCACGGCGAAGTTGTTGCGTTTg < 2:3116325/143‑1 (MQ=255) cgggggcggTACCCGGGCGGCGGGCGCGCCACCACCAAACCAGCCAAACGCGTGCCGGGGGGGGCTGAAATTTGGTTTTAAATGGGTCTTGGGGCGCCTCACGGGCC‑GGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg < 2:5833130/146‑1 (MQ=255) cggcggcgGAACCCGCGGGGCGCGCGCGGCCCCACCAAACCTGGCCCCCGCGAGGCGGGCGGGGCTGTAATTTGGTTCGAAATGGTTCTTGGGTCGCCCCAGGGGCG‑GGCCGGGGCGGTGTGCACAGGCACGGCGAAGTTGTTGCGTTTg < 2:4825894/148‑1 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTTGGtttt > 1:6338286/1‑149 (MQ=255) tACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCACCGCGTGCTGGGGGGGGCTGTAAATTCGTTTGAAATGGGTCTTGGGTCGCCTCACGGGCC‑TGCCTGCGCGGGCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTg < 2:1662587/150‑1 (MQ=255) aGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGGCGGCGCAGGCACCGCGACGTGGTTGCGTTTGCAGGGCTGGGcgt > 1:189826/1‑148 (MQ=255) cgcgGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCg > 1:3999310/1‑150 (MQ=255) gcggcgGGCGCGGCACCACCAAACAAGGCCAACGCGAGCTGGGGGGGGATGTAAATTCTTTTTAAATGGGTAATGGGTCGCCTCAGTGGCC‑TGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa < 2:207827/150‑1 (MQ=255) cgTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCtt > 1:5966363/1‑150 (MQ=255) tGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt > 1:2389158/1‑150 (MQ=255) gcgcgcCACAACAAAACACGGCAAACGCGCGCTGGGGGGGGTTGTAATTTCTTTTCAAATGGTTCTTGGGTCGCCTCAGTGGCC‑GGCGTGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 1:4185058/150‑1 (MQ=255) accaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt > 2:4631695/1‑150 (MQ=255) accaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt > 2:6712029/1‑150 (MQ=255) caAACACGCCCACCGCGCGCCGGGGGGGGCGGGAATTTCTTTTGAAACGGGTCATGGGTCGCCCCACGGGCG‑GGCCGGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTc < 2:1352778/150‑1 (MQ=255) cggCCACCGCGAGGTGGGGGGGGCTTTAATTTCTTTTTAATTGGTTCTTGGGTCCCCACCCGGGCC‑GGCCTGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:1288829/149‑1 (MQ=255) aGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc > 2:4501092/1‑150 (MQ=255) ccAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTg > 2:2450909/1‑150 (MQ=255) tccgcgcgCTGGGGGGGGCTGTAATTTCGTTTTAAACGGGTCTTGGGTCGCCTCACGGGCC‑GGCGTGCGCGGTGTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTa < 2:6547264/148‑1 (MQ=255) aaCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTa > 2:686961/1‑150 (MQ=255) aaCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCGTTCCGGCCCCTGTa > 1:1390208/1‑150 (MQ=255) aCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCAGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTAc > 1:3685144/1‑150 (MQ=255) cgcgAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCATCTGGGTGCCGCTTTCCGGCCCCAGTAca > 1:6546802/1‑149 (MQ=255) cgcgctggggggggCTGGAAATTCTTTTGAAATGGGACATGGGCCGCCTCACTGGCC‑TGCCTGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 1:4521126/144‑1 (MQ=255) gAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCg > 2:3676706/1‑150 (MQ=255) ggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgcg > 2:5965585/1‑150 (MQ=255) ggggggGTGGAAATGCGTTTGAACGGGGTCTGGGGTCGCCGCCCGGGCG‑GGCCGGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:6073263/148‑1 (MQ=255) ggAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGTGTTTTCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAAGCGAGCAGgcgc > 1:4313647/1‑150 (MQ=255) gAAATTCTTTTGAAAAGGGTCATGGGTCGCCTCACGGGCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgct < 2:5225773/150‑1 (MQ=255) caaaTTGTTTTTAAACGGGTCTGGGGGCGCCCCCGGGGCG‑GGCCGGCGGGGGCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgct < 1:5163524/149‑1 (MQ=255) aaaTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCGGCGCGGTCTGCGCAGGCACCGCGAAGTTGTTGCGTTTTCAGAGCTTGGCTTAGACCATCTGGGTGCCGCGTTCCGGCCCCAGTACCACGAACGCGAGCACgcgcgg > 1:5834662/1‑148 (MQ=255) aaaTTCGTTGGAAACGGGCCCGGGGGCGCCCCCGGGGCC‑GGCCGGCGCGGGCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctg < 1:6706462/150‑1 (MQ=255) ttCGTTTGAAACGGGCCTGGGGTCGCCTCACTGGCC‑GGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct < 2:811518/150‑1 (MQ=255) tCGTTTTAAAAGGGTCTTGGGTCGCCCCACGGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggctg < 2:4761516/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGTGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:2725226/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGTGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:6190593/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc > 2:1825842/1‑150 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc > 1:6247284/1‑150 (MQ=255) tttGAAAAGGGTCATGGGTAGCCTCAATGGCC‑TGACTTAGCGGTCAGCGCAGGCACGGAGAAGTTCTTTCGTTTTCAGAGATTGGCTTATAACTAATTGGTGCCGCTTTCAGGCCACTGTACCACGAACGCGAGCAGTCGCTGTCTGccc > 2:4979651/1‑150 (MQ=255) ttGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCTAGCAGGCGCTGGCTGGccc > 1:2711995/1‑150 (MQ=255) tGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa > 2:2849202/1‑150 (MQ=255) gAAATGGGCCTTGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg < 2:4064937/150‑1 (MQ=255) aaaaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCCGGCGCTGGCTGGCCCAGt > 1:4363610/1‑150 (MQ=255) ccaGGGTCCGGGGGCGCCTCCCGGGCC‑GGCCGGCGCGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 1:4913717/148‑1 (MQ=255) aatgggTCTTGGGGCGCCACCGGGGCG‑TGCCTGCGGGGTGTGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 1:1551600/147‑1 (MQ=255) aaaGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc > 1:5606533/1‑150 (MQ=255) gggTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 2:5783112/150‑1 (MQ=255) gggTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc > 2:792017/1‑150 (MQ=255) gTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 2:4610436/1‑150 (MQ=255) gTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 2:1423955/1‑150 (MQ=255) tCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTc > 2:6411281/1‑150 (MQ=255) ttGGGTCGCCTCCCGGGCC‑GGCCTGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCtt < 2:5540250/149‑1 (MQ=255) tcgtgggCCTCCCGGGCC‑GGCCGGGGGGTTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTc < 1:2456500/144‑1 (MQ=255) ggTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg > 1:5681547/1‑83 (MQ=255) ggTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg < 2:5681547/83‑1 (MQ=255) tCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGAACTTCTGGGTGCCGCTTTGCGGCCCCTGTACCACGAAAGCGAGCAGGCGCTGGCTGGACCAGTCCTCGTCTTCgcgc > 1:6618337/1‑150 (MQ=255) acgggCC‑TGCCTGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 1:562151/147‑1 (MQ=255) acgggCC‑TGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 2:5409288/147‑1 (MQ=255) aCTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa > 2:3263423/1‑150 (MQ=255) cTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCGGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCACGTCTTCGCGCATCTGGaa > 2:2098506/1‑150 (MQ=255) cgggcgggcctgcGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:534430/143‑1 (MQ=255) gcc‑tgcctGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGAc > 2:6294863/1‑150 (MQ=255) cgtgcctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTAGACCATCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAACCGACCAGGCGCTGGCTGGCCCAGTCCTCGTCTTAGCGCCTATTGAAGACg > 2:296795/3‑150 (MQ=255) c‑tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:256568/1‑150 (MQ=255) tgcctgcGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGaa < 1:2107196/150‑1 (MQ=255) tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGac > 1:6094730/1‑149 (MQ=255) tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGaa > 1:2203736/1‑150 (MQ=255) ctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg > 1:167341/1‑150 (MQ=255) ctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg > 1:5492899/1‑150 (MQ=255) ctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg > 1:5296002/1‑150 (MQ=255) ggTCTGCGCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTc < 1:902351/150‑1 (MQ=255) tCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCgg > 1:4964652/1‑150 (MQ=255) | TCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCC‑TGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1469005‑1469303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |