BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,502,790	T→G	6.2%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,502,790	0	T	G	6.2%	802.9 / 24.8	285	M141R (ATG→AGG)	PP_1310	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (115/140); new base G (11/10); total (135/150)
Fisher's exact test for biased strand distribution p-value = 6.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 292 total aligned reads displayed.

TGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCG  >  NC_002947/1502641‑1502939

  cagcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgc                                                                                                                                                     >  1:6012155/1‑150 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAGACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   <  2:1018213/150‑1 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATgcgc                                                                                                                                                   >  2:1989298/1‑150 (MQ=255)

    gcaTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCGTgcgc                                                                                                                                                   >  1:2747175/1‑150 (MQ=255)

     caTGGCTGCGTGCCAGGCACCCCGGGCTACCTCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGcc                                                                                                                                                  <  1:3686717/150‑1 (MQ=255)

      aTGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCt                                                                                                                                                 <  1:2962757/150‑1 (MQ=255)

        ggCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGa                                                                                                                                               <  1:4582762/150‑1 (MQ=255)

           tGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAccg                                                                                                                                            >  2:4453046/1‑150 (MQ=255)

           tGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCGGAccg                                                                                                                                            >  2:6621916/1‑150 (MQ=255)

            gCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAccgc                                                                                                                                           <  2:6527829/150‑1 (MQ=255)

             cGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGAccgcc                                                                                                                                          <  2:3160479/150‑1 (MQ=255)

               tGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGGGGGCCGGCGCCGGGccgccgc                                                                                                                                        >  1:1685860/1‑149 (MQ=255)

                gCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAGGCGCATGAccgccggg                                                                                                                                       <  2:6114316/150‑3 (MQ=255)

                 ccAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCTCGGCGGTCAGGCGCATGAccgccgggg                                                                                                                                      <  2:161018/150‑4 (MQ=255)

                   aGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCAAGCGCCTGACCGCCGCATTc                                                                                                                                    >  2:1404817/1‑150 (MQ=255)

                    ggCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTcc                                                                                                                                   <  2:4683013/150‑1 (MQ=255)

                       aCCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGGGCCTGACCGCCGAATTCCCGa                                                                                                                                >  1:3648253/1‑150 (MQ=255)

                       aCCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGa                                                                                                                                <  2:630302/150‑1 (MQ=255)

                         cccGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATTCGCCTGACCGCCGAATTCCCGATg                                                                                                                              >  2:3695909/1‑150 (MQ=255)

                          ccGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGc                                                                                                                             >  1:5566081/1‑150 (MQ=255)

                                     cTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGc                                                                                                                  <  1:427850/150‑1 (MQ=255)

                                         tGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGCTCAAGCGCCAGACCGCCGAATTCCCGAAGCCGCAGCGCAGCCCGc                                                                                                              >  2:4970864/1‑150 (MQ=255)

                                           cTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGcccccac                                                                                                            >  1:6281435/1‑146 (MQ=255)

                                           cTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTc                                                                                                            <  1:3772024/150‑1 (MQ=255)

                                           cTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTc                                                                                                            <  2:3847476/150‑1 (MQ=255)

                                            tGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCa                                                                                                           <  2:1370653/150‑1 (MQ=255)

                                            tGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCa                                                                                                           <  2:4269865/150‑1 (MQ=255)

                                            tGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCAGGCGCGGGAGCGCCGCCTGCACGAGGCCGCCGCGCGGGCCGcgcc                                                                                                           >  1:4575503/1‑147 (MQ=255)

                                             gATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCAc                                                                                                          >  2:3307096/1‑150 (MQ=255)

                                              aTGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGCATTACCGATGCCGCAGCCCGGCCCCCTcccc                                                                                                         >  1:6623550/1‑150 (MQ=255)

                                               tGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCGAAATCCCGATGCCGCCGCGCGGCCCCCGCAccc                                                                                                        >  1:673537/1‑149 (MQ=255)

                                                 ggCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGTCGCAGCGCTGCCCGCTCACCgtg                                                                                                      <  2:5599526/150‑1 (MQ=255)

                                                 ggCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCGGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCgtg                                                                                                      <  1:3923080/150‑1 (MQ=255)

                                                      ttcgttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCa                                                                                                 <  2:5796143/150‑1 (MQ=255)

                                                      ttcgttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCa                                                                                                 <  2:6382522/150‑1 (MQ=255)

                                                          ttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCg                                                                                             <  1:61600/150‑1 (MQ=255)

                                                          ttcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCg                                                                                             >  1:1096875/1‑150 (MQ=255)

                                                           tcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCgg                                                                                            <  2:4142035/150‑1 (MQ=255)

                                                           tcgGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCCAATTCCCGATGCCGCAGCGCGGCCCGCTCACCCAGGTGCAGCCgg                                                                                            >  1:5495501/1‑150 (MQ=255)

                                                             ggtggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGAc                                                                                          >  2:2705679/1‑150 (MQ=255)

                                                             ggtggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGAc                                                                                          >  2:3490528/1‑150 (MQ=255)

                                                              gtggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCCCCGAAGTCCCGAAGCCGAACCGCGGCCCGCGCACCGTGGGGCAGCCCGACg                                                                                         >  1:6390489/1‑150 (MQ=255)

                                                              gtggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCAGACCGCCGAATTACCGAGGCCGCAGCGCGGCCCCCGCACCCTGGTGCAGCCGGAcc                                                                                         >  1:1159264/1‑149 (MQ=255)

                                                                ggtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGcc                                                                                       <  2:5911783/150‑1 (MQ=255)

                                                                 gtTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCGTGCGCCGGCCCCCCGCATTACCGATGCCGCCGCCCGGCCCGCGCACCCGGGTGCAGCCGCccgccg                                                                                      >  1:5243634/1‑150 (MQ=255)

                                                                  tttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCAGACCGCCGAATTCCCGAAGCCGCAGCGCTGCCCCCTCACCCTGGTGCAGCCGGACGCCgc                                                                                     >  2:3759360/1‑149 (MQ=255)

                                                                   ttCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTACCGATGCCGCCGCGCAGCCCGCTCACCCGGGTGCAGCCGGCCGCCGAt                                                                                    >  2:6633389/1‑150 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 <  2:2062039/150‑1 (MQ=255)

                                                                      gTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 <  1:5784119/150‑1 (MQ=255)

                                                                           caccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAgtcgt                                                                            <  2:2232806/150‑1 (MQ=255)

                                                                            accaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATTCGCCTGACCCCCGAAATCCCGATGCCGCAGCGCGGCCCGCTCACCGTGGTGCAGCCGGACGCCCCTGAAgtcgtg                                                                           >  2:2854642/1‑149 (MQ=255)

                                                                            accaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTACCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAgtcgtc                                                                           >  2:1090136/1‑150 (MQ=255)

                                                                             ccaGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCGGTTCATGATCGCCCCGGCGGGCATGCGCCTGACCGCCGCATTCCCGATGCCGCAGCGCTGCCCGCGCACCGTGGTGCAGCCGGCCGCCGCGGACGtcgtcg                                                                          >  2:711814/1‑150 (MQ=255)

                                                                              caGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTcgc                                                                         <  1:4906244/150‑1 (MQ=255)

                                                                                     gCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAg                                                                  <  2:6790400/150‑1 (MQ=255)

                                                                                       cGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGCCGGCGCCGGACCGCCCCAATCCCGATGCCGCCGCGCGGCCCGCGCCCCGGGGGGCCGCCGGCCGCCCCGGCAGGCGGCGcgccgccccg                                                                >  2:188677/1‑146 (MQ=255)

                                                                                        gggCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTg                                                               <  2:1321187/150‑1 (MQ=255)

                                                                                         ggCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTgg                                                              <  2:4930626/150‑1 (MQ=255)

                                                                                           cgcCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGtt                                                            <  2:2315100/150‑1 (MQ=255)

                                                                                           cgcCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGtt                                                            <  2:4515876/150‑1 (MQ=255)

                                                                                               ttGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTACCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCCGCTGGTTTACg                                                        >  2:1366699/1‑150 (MQ=255)

                                                                                               ttGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCAAGCGCCAGACCGCCCAATTCCCGATGCCCCAGCGCTGCCCGCACACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCCGCTGGTTTACg                                                        >  2:3191555/1‑150 (MQ=255)

                                                                                               ttGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGGGCTGCGCCGGGCCGCCGAATTCCCGATGCCGCAGCGCGGCCCGCGCACCGGGGTGCAGCCGGACGCCCCTGAAGTCGTCGCGCCGCAGCGGGTGTACg                                                        >  1:5389966/1‑150 (MQ=255)

                                                                                                 gAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGGGGGGGTGCGCCTGACCGCCCCATTCCCGAAGCCGCAGCGCTGCCCGCTCCCCGGGGGGCAGCCGGACGCCGAGGCAGTCGGCGCGCCGCAGCGGGGTTACGaa                                                      >  1:2924633/1‑150 (MQ=255)

                                                                                                  aaaCTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                     <  1:6685901/150‑1 (MQ=255)

                                                                                                  aaaCTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAt                                                     <  1:2789622/150‑1 (MQ=255)

                                                                                                       gCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCGTGCGCCTGACCGCCGAATTCCCCATGCCGCAGCGCAGCCCGCGCAACGGGGTGAAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCGGGTGTAAGaaagtacc                                                >  1:3058350/1‑144 (MQ=255)

                                                                                                       gCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGGCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTcc                                                <  1:982269/150‑1 (MQ=255)

                                                                                                         aGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGa                                              <  2:5566081/150‑1 (MQ=255)

                                                                                                          ggCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGAc                                             <  2:5258048/150‑1 (MQ=255)

                                                                                                             gTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGc                                          <  2:3425807/150‑1 (MQ=255)

                                                                                                               cGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCt                                        <  2:112907/150‑1 (MQ=255)

                                                                                                                  gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                     <  1:366482/150‑1 (MQ=255)

                                                                                                                  gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                     >  2:2115501/1‑150 (MQ=255)

                                                                                                                  gTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTc                                     <  2:4202180/150‑1 (MQ=255)

                                                                                                                     gcagcaCCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCACACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTcgcg                                  >  1:5136733/1‑150 (MQ=255)

                                                                                                                      cagcaCCTGTTCATGATCGCCCCGGCGGTCATGCGCCGGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGGCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTcgcgg                                 >  1:4710598/1‑149 (MQ=255)

                                                                                                                       agcaCCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCCCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTc                                <  1:5634919/150‑1 (MQ=255)

                                                                                                                         caCCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTccc                              <  2:1467546/150‑1 (MQ=255)

                                                                                                                          aCCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAAATCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCCGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCAGTCGCGTcccc                             >  2:4033741/1‑150 (MQ=255)

                                                                                                                            cTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCAt                           <  1:3029772/150‑1 (MQ=255)

                                                                                                                             ggcgcATGACCGCCGGGGCGATCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATg                          >  2:2476035/5‑150 (MQ=255)

                                                                                                                              gTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGa                         <  2:926196/150‑1 (MQ=255)

                                                                                                                               ttCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAg                        >  2:3023683/1‑150 (MQ=255)

                                                                                                                                 cATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAgct                      <  1:1523568/150‑1 (MQ=255)

                                                                                                                                  aTGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGAGGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCAAGAgctg                     >  1:1416964/1‑150 (MQ=255)

                                                                                                                                  aTGATCGCCCCGGCGGTCAATCGCCAGACCCCCGAATTCCCCATTCCGCACAGCTGCCCGCTCACAGGGGTGCAGCCGGACGCCGAAGAAGTCGTCGCGCCGCAGCTGGTTTACGAAAGGTCCGACAGCCTGTCGCGTCCCCAAGAgctg                     >  2:86317/1‑150 (MQ=255)

                                                                                                                                   tGATCGCCCCGGCGGTCTTGCGCCGGACCGCCGAATTCCCGATGCCGCAGCGCGGCCCGCTCCCCGTGGTGCAGCCGGTCGCCGATGAAGTCGTGGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAgctgc                    <  1:2065380/150‑1 (MQ=255)

                                                                                                                                        gCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGAt                                                                                    <  1:2544876/81‑1 (MQ=255)

                                                                                                                                        gCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGaaa               <  1:1023801/150‑1 (MQ=255)

                                                                                                                                        gCCCCGGCGGTCATGCGCCTGACCGCCGAATTACCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGAt                                                                                    >  2:2544876/1‑81 (MQ=255)

                                                                                                                                         ccccGGCGGTCATGCGCCTGACCGCCCAATACCCGAAGCCCCAGCCCAGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTGTACGAATGGTCCGACAGCCTGACGCGTCCCCAAGAGCTGCTGAAAg              >  1:5882137/1‑150 (MQ=255)

                                                                                                                                            cggcggTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTgg           <  2:5726432/150‑1 (MQ=255)

                                                                                                                                             ggcggTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGc          <  1:2225770/150‑1 (MQ=255)

                                                                                                                                             ggcggTCAGGCGCATGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGaa                                                                                 >  1:771727/1‑79 (MQ=255)

                                                                                                                                                  tCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAAAGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAAt     <  2:2934120/150‑1 (MQ=255)

                                                                                                                                                    aTGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGc   >  2:6454042/1‑150 (MQ=255)

                                                                                                                                                     tGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGTTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCg  <  2:1685860/150‑1 (MQ=255)

                                                                                                                                                     tGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCg  <  1:3307096/150‑1 (MQ=255)

                                                                                                                                                     tGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGGGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCg  <  2:3906502/150‑1 (MQ=255)

TGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGAGTTGCAGCACCTGTTCATGATCGCCCCGGCGGTCATGCGCCTGACCGCCGAATTCCCGATGCCGCAGCGCTGCCCGCTCACCGTGGTGCAGCCGGACGCCGATGAAGTCGTCGCGCCGCAGCTGGTTTACGAATGGTCCGACAGCCTGTCGCGTCCCCATGAGCTGCTGAAAGTGGCAGAATGCG  >  NC_002947/1502641‑1502939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`