| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,513,037 | G→T | 9.9% | intergenic (+18/+44) | sspB → / ← PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,513,037 | 0 | G | T | 9.9% | 807.9 / 55.9 | 255 | intergenic (+18/+44) | sspB/PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (113/116); new base T (10/16); total (123/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 271 total aligned reads displayed.
CTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGG > NC_002947/1512888‑1513186 | tGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCgga < 2:3848570/150‑1 (MQ=255) tGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCgga < 1:2357707/150‑1 (MQ=255) ggAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat > 2:4460754/1‑150 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGcc < 2:2255905/150‑1 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑t > 2:4104456/1‑150 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑t < 1:1456835/150‑1 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑t > 1:156974/1‑150 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tt < 2:2694565/150‑1 (MQ=255) cGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAGGCGATCCATCCGGATCGCC‑tt‑tt < 1:3181858/150‑1 (MQ=255) atggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tt‑ttt < 2:108499/150‑1 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tt‑ttttt < 1:3990825/150‑2 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tt‑ttttt < 1:5106054/150‑2 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCC‑tt‑ttttt < 1:2904262/150‑2 (MQ=255) tggCGACGAGCTGGAAGTCGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑Ttttgttt < 1:4288238/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGTAAGTGGTCAAGTAAC‑AAAAAAGGCGATCCATCCGGATCGCC‑tt‑tttttgtta < 2:3647440/150‑6 (MQ=38) gCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGCTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAACAGGCGATCCATCCGGATCGCC‑tt‑tttttgtttct < 1:5704033/150‑8 (MQ=38) gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGCCGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGcc > 1:3541126/1‑150 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAg > 2:5290562/1‑150 (MQ=255) tGGAAGACGATGATATGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAg < 2:2451374/150‑1 (MQ=255) gACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAAt > 1:4859810/1‑150 (MQ=255) gACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAAt < 1:4412322/150‑1 (MQ=255) tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTg > 2:279968/1‑150 (MQ=255) tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTg > 2:3336173/1‑150 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGCGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:2085211/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:4763699/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:4491043/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:4679886/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:5486426/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa > 1:6106155/1‑150 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:1951097/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGa < 1:1334432/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAAGCACTGa < 2:6727917/150‑1 (MQ=255) cAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAAt > 2:2487882/1‑150 (MQ=255) aGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc < 2:3015778/150‑1 (MQ=255) aGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc > 1:1981268/1‑150 (MQ=255) aGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc < 2:13096/150‑1 (MQ=255) gCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCg > 2:5404605/1‑150 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGGCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:5619301/150‑1 (MQ=255) ggATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCACTCACTGAGTCAATCGATg > 2:4188968/1‑150 (MQ=255) gACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACt < 2:6081069/150‑1 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 2:1241341/1‑150 (MQ=255) cccGCCAGACGATGGAGGGCAGCCTCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc > 1:698582/1‑150 (MQ=255) cccGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc > 2:3363327/1‑150 (MQ=255) gCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGTCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTAc > 2:5747575/1‑138 (MQ=255) gCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAATAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTg > 2:5540751/1‑150 (MQ=255) cAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGAc > 1:2186418/1‑150 (MQ=255) cAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTGGAc > 1:6649720/1‑150 (MQ=255) aGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACg < 1:1696406/150‑1 (MQ=255) gACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGa > 1:2985419/1‑150 (MQ=255) ggAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtcttct < 2:1722217/150‑1 (MQ=255) gAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTg < 1:6068563/150‑1 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 1:3720165/1‑150 (MQ=255) gCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACg > 1:6421571/1‑150 (MQ=255) cAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGc > 2:6677798/1‑150 (MQ=255) aGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGcc > 2:1166808/1‑150 (MQ=255) gccgccGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGccc < 2:3785721/150‑1 (MQ=255) ccgccgCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCg > 2:2195266/1‑150 (MQ=255) gccgcGTCCGACTGGCCGGCAAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGaa > 1:6533430/1‑150 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc < 2:1474119/150‑1 (MQ=255) ccGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCt < 1:4992584/150‑1 (MQ=255) ccGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCt < 1:4320354/150‑1 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 1:1864400/1‑150 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 1:6826745/1‑150 (MQ=255) gccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGcaccac > 1:5372597/1‑150 (MQ=255) cAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGt > 2:4585814/1‑150 (MQ=255) cAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCAAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGt > 2:2052077/1‑150 (MQ=255) ccTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGcc < 1:5543106/150‑1 (MQ=255) cTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCg > 2:1976118/1‑150 (MQ=255) cTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCg > 2:6451868/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa < 2:3447875/150‑1 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 2:4837738/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 2:910966/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:1743538/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:3365869/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:3569829/1‑150 (MQ=255) aaaGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGt < 2:6140057/150‑1 (MQ=255) ggTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTgg < 1:129201/50‑1 (MQ=255) ggTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGct > 1:4657337/1‑150 (MQ=255) gTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTc > 2:1881176/1‑55 (MQ=255) tCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttc < 1:4104456/150‑1 (MQ=255) aaGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt > 1:177627/1‑150 (MQ=255) caaacaaaaaaGGCGATCCATCCGGATTGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc > 1:5218473/6‑150 (MQ=255) aaCAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACg < 2:2767170/150‑1 (MQ=255) aCAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg > 1:3884918/1‑150 (MQ=255) aCAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg < 2:4615116/150‑1 (MQ=255) caaaaaaGGCGATCCATCCGGATCGCC‑TTGTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCGTGACGATCTTCTGCACGCCCGAAACACCCGGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACggg > 1:3618038/2‑150 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 1:5753969/1‑150 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 2:1064258/1‑150 (MQ=255) aaaaaGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGa > 2:2969078/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc < 1:3441255/150‑1 (MQ=255) aaaaGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc > 1:1123159/1‑150 (MQ=255) aaaGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc > 2:4731571/1‑150 (MQ=255) aaaGGCGATCCATCCGGATCGCCTTT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc > 1:2597135/1‑150 (MQ=255) aaGGCGATCCATCCGGATCGCCTTT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCACTCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCCCGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc > 2:5574226/1‑150 (MQ=255) aaGGCGATCCATCCGGATCGCCTTT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAGGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAATGGCCGAGTTGGCTTCTTGACGGGTGAcc > 2:2108711/1‑150 (MQ=255) ggCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAgg < 2:6590757/150‑1 (MQ=255) gATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGccc > 1:5410986/1‑150 (MQ=255) gATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGccc > 1:6288123/1‑150 (MQ=255) gatggatCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAgg < 1:2721558/150‑1 (MQ=255) gatggatCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAgg > 2:3591221/1‑150 (MQ=255) | CTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCC‑TT‑TTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGG > NC_002947/1512888‑1513186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |