Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,542,944 A→T 5.1% intergenic (+15/+18) PP_1348 → / ← pduO MutT/nudix family protein/thiamine‑phosphate pyrophosphorylase/ATP:cob(I)alamin adenosyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,542,9440AT 5.1% 1014.3 / 28.3 295intergenic (+15/+18)PP_1348/pduOMutT/nudix family protein/thiamine‑phosphate pyrophosphorylase/ATP:cob(I)alamin adenosyltransferase
Reads supporting (aligned to +/- strand):  ref base A (147/133);  new base T (11/4);  total (158/137)
Fisher's exact test for biased strand distribution p-value = 1.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 306 total aligned reads displayed.

GCGCAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGTG  >  NC_002947/1542795‑1543092
                                                                                                                                                     |                                                                                                                                                    
gcgcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCaa                                                                                                                                                      >  2:6638789/1‑150 (MQ=255)
 cgcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCaaa                                                                                                                                                     <  2:2284304/150‑1 (MQ=255)
 cgcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCaaa                                                                                                                                                     <  1:2808471/150‑1 (MQ=255)
  gcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCtaat                                                                                                                                                    <  2:1302537/150‑2 (MQ=255)
  gcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAag                                                                                                                                                    <  1:429286/150‑1 (MQ=255)
  gcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAag                                                                                                                                                    >  1:3508380/1‑150 (MQ=255)
  gcAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAag                                                                                                                                                    >  2:4107758/1‑150 (MQ=255)
    aGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAagca                                                                                                                                                  <  2:748686/150‑1 (MQ=255)
    aGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAagca                                                                                                                                                  <  1:3970841/150‑1 (MQ=255)
    aGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAagca                                                                                                                                                  <  1:1001618/150‑1 (MQ=255)
       ggTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGcc                                                                                                                                               <  2:2453435/150‑1 (MQ=255)
        gTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGccc                                                                                                                                              >  1:4497745/1‑150 (MQ=255)
           gACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCTTTGCAGcccctt                                                                                                                                           <  2:1697087/150‑3 (MQ=255)
            aCTGCCGGGTTCAACTAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCtt                                                                                                                                          <  2:1272773/150‑1 (MQ=255)
              tGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTa                                                                                                                                        <  1:4691295/150‑1 (MQ=255)
                   ggTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATc                                                                                                                                   <  2:1518126/150‑1 (MQ=255)
                      tCAACAAGCCTGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCTGGCGTTCTTGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGc                                                                                                                                <  2:6747751/150‑1 (MQ=255)
                        aacaaGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCt                                                                                                                              >  2:3640301/1‑150 (MQ=255)
                        aacaaGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCt                                                                                                                              >  2:2356656/1‑150 (MQ=255)
                        aacaaGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCt                                                                                                                              >  1:1747839/1‑150 (MQ=255)
                         acaaGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCtt                                                                                                                                          <  1:1396511/137‑1 (MQ=255)
                         acaaGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCtt                                                                                                                             >  2:4596190/1‑150 (MQ=255)
                             gCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAgg                                                                                                                         >  1:2587710/1‑150 (MQ=255)
                                 gTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGTGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTg                                                                                                                     <  1:4947370/150‑1 (MQ=255)
                                  tttACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTgg                                                                                                                    <  1:6215140/150‑1 (MQ=255)
                                  tttACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTgg                                                                                                                    <  2:3667793/150‑1 (MQ=255)
                                   ttACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTggg                                                                                                                   <  2:4303773/150‑1 (MQ=255)
                                      ccTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGgggc                                                                                                                >  1:1619408/1‑150 (MQ=255)
                                       ctgctgGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGgggcg                                                                                                               <  1:743658/150‑1 (MQ=255)
                                        tgctgGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGgggcgg                                                                                                              >  2:329833/1‑150 (MQ=255)
                                        tgctgGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGgggcgg                                                                                                              >  2:5557791/1‑150 (MQ=255)
                                         gctgGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGgggcggg                                                                                                             >  2:4182395/1‑150 (MQ=255)
                                                  gggaGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCATTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCacaa                                                                                                    <  2:4805956/147‑1 (MQ=255)
                                                    tAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCacaaca                                                                                                  >  2:3251701/1‑150 (MQ=255)
                                                         ccGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCt                                                                                             <  1:3919905/150‑1 (MQ=255)
                                                         ccGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCt                                                                                             >  2:6004560/1‑150 (MQ=255)
                                                         ccGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCt                                                                                             >  1:6508265/1‑150 (MQ=255)
                                                          cGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTg                                                                                            >  2:2162597/1‑150 (MQ=255)
                                                           gAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGc                                                                                           >  2:5182254/1‑150 (MQ=255)
                                                              tGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACCGGGTGTAGCCGGGATCCGGGCGTTCGGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAAt                                                                                        <  1:3289255/150‑1 (MQ=255)
                                                              tGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAAt                                                                                        >  2:6163349/1‑150 (MQ=255)
                                                                  cgcgAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCacaa                                                                                                    <  1:3680843/134‑1 (MQ=255)
                                                                            ccTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAACCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTgccgccgcc                                                                          <  2:3508380/150‑1 (MQ=255)
                                                                              tGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCg                                                                        >  1:910319/1‑150 (MQ=255)
                                                                               gggAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCga                                                                       >  2:2832865/1‑150 (MQ=255)
                                                                                     ccGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATcc                                                                 >  1:4958355/1‑150 (MQ=255)
                                                                                      cGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGt                                                               <  1:1260312/150‑1 (MQ=255)
                                                                                       ggggCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGt                                                               <  2:5377383/150‑1 (MQ=255)
                                                                                            acaGGGTGTGGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGtgctgc                                                          >  2:2642101/1‑150 (MQ=255)
                                                                                            acaGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGtgctgc                                                          >  2:2075334/1‑150 (MQ=255)
                                                                                                  tgtAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACaaa                                                    <  2:1012789/150‑1 (MQ=255)
                                                                                                     aGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAagag                                                 <  1:6638789/150‑1 (MQ=255)
                                                                                                      gCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGc                                                >  1:1480103/1‑150 (MQ=255)
                                                                                                      gCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGc                                                >  1:4724561/1‑150 (MQ=255)
                                                                                                       ccGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCa                                               <  2:5910430/150‑1 (MQ=255)
                                                                                                        cGGGATCCGGGCGTTCTGGCCCGAGGATTGAGTCAAGGGGCTGCAAAGCAGCCCCCATTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAg                                              <  2:4376570/150‑1 (MQ=255)
                                                                                                                gggCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGaaa                                      >  1:6027392/1‑150 (MQ=255)
                                                                                                                gggCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGaaa                                      >  1:4080334/1‑150 (MQ=255)
                                                                                                                gggCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGaaa                                      <  2:685613/150‑1 (MQ=255)
                                                                                                                gggCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGaaa                                      >  1:2709074/1‑150 (MQ=255)
                                                                                                                  gCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGc                                    <  1:6354380/150‑1 (MQ=255)
                                                                                                                      tCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGt                                <  1:2724059/150‑1 (MQ=255)
                                                                                                                      tCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGt                                <  2:4990542/150‑1 (MQ=255)
                                                                                                                       cTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGtt                               <  1:5003612/150‑1 (MQ=255)
                                                                                                                       cTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGtt                               <  2:3359247/150‑1 (MQ=255)
                                                                                                                        tGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTg                              >  2:5657178/1‑150 (MQ=255)
                                                                                                                        tGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTg                              <  1:3365154/150‑1 (MQ=255)
                                                                                                                            ccGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGatat                          >  1:4042082/1‑150 (MQ=255)
                                                                                                                            ccGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGatat                          >  1:5906337/1‑150 (MQ=255)
                                                                                                                            ccGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGatat                          >  1:2280341/1‑150 (MQ=255)
                                                                                                                             cGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGAtata                         >  1:1631883/1‑150 (MQ=255)
                                                                                                                                ggTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGc                      <  1:529403/150‑1 (MQ=255)
                                                                                                                                ggTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGc                      <  1:1874105/150‑1 (MQ=255)
                                                                                                                                ggTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGc                      <  1:805484/150‑1 (MQ=255)
                                                                                                                                  tttGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCa                    <  1:4376846/150‑1 (MQ=255)
                                                                                                                                  tttGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCa                    <  2:1352206/150‑1 (MQ=255)
                                                                                                                                    tGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGa                  <  1:3640301/150‑1 (MQ=255)
                                                                                                                                       taaagggggCTGCTTTGCAGCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCaa              >  1:2080181/6‑150 (MQ=255)
                                                                                                                                       gTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCa               >  1:5353002/1‑150 (MQ=255)
                                                                                                                                         cAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAAc             >  2:6051754/1‑150 (MQ=255)
                                                                                                                                         cAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAAc             >  2:2926623/1‑150 (MQ=255)
                                                                                                                                         cAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAAc             <  2:2231605/150‑1 (MQ=255)
                                                                                                                                          agggggCTGCTTTGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGa                                        <  1:459220/120‑1 (MQ=255)
                                                                                                                                          aaGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACg            >  1:5509397/1‑150 (MQ=255)
                                                                                                                                          aaGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACg            >  1:2867297/1‑150 (MQ=255)
                                                                                                                                          aaGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACg            >  1:5247878/1‑150 (MQ=255)
                                                                                                                                           aGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGc           >  2:2742721/1‑150 (MQ=255)
                                                                                                                                            ggggCTGCTTTGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACAATTCATCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGAAGGTCGGAAAGCCGGTTGATATAAGCCAGACCAACGcc          >  1:2404914/1‑150 (MQ=255)
                                                                                                                                            ggggCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGcc          >  1:6311551/1‑150 (MQ=255)
                                                                                                                                            ggggCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGcc          >  2:5288914/1‑150 (MQ=255)
                                                                                                                                             gggCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCt         >  1:6116686/1‑150 (MQ=255)
                                                                                                                                                 agCAAAGCAGCCCCCTTGAGTATCAGCCTTCAGGTTTGCGGGCGGGCTGCCACAACACTACTGCAATCCCATGCCGCCGCCCGATGATCCGTGCTGCAAAAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCa     >  2:3077928/2‑150 (MQ=255)
                                                                                                                                                  gCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAg    >  1:2689038/1‑150 (MQ=255)
                                                                                                                                                  gCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAg    >  1:5672992/1‑150 (MQ=255)
                                                                                                                                                   cAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCTCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGt   >  1:4195314/1‑150 (MQ=255)
                                                                                                                                                   cAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGt   <  1:3245473/150‑1 (MQ=255)
                                                                                                                                                   cAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGt   >  2:3925175/1‑150 (MQ=255)
                                                                                                                                                    aaaGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGt                                                               <  2:1442014/89‑1 (MQ=255)
                                                                                                                                                    aaaGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGTg  >  2:4475547/1‑150 (MQ=255)
                                                                                                                                                    aaaGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGTg  >  2:3754271/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GCGCAGCGGTTGACTGCCGGGTTCAACAAGCCGGTTTACCTGCTGGGTGGGGTAGGGCCGAGTGAGCGCGAGCAGGCCTGGGAAGCCGGGGCACAGGGTGTAGCCGGGATCCGGGCGTTCTGGCCCGAGGTTTGAGTCAAGGGGCTGCAAAGCAGCCCCCTTTAGTATCAGCCTTCAGGTTTGGGGGCGGGCTGCCACAACACTTCTGCAATGCCTTGCCGCCGCCCGATGATCCGTGCTGCCACAAAGAGCAGGTCGGAAAGCCGGTTGATATACGCCAGACCAACGCCTTCCAGTG  >  NC_002947/1542795‑1543092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: