| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 189,893 | A→C | 5.6% | intergenic (+55/+102) | PP_0165 → / ← PP_0166 | GGDEF domain‑containing protein/HlyD family secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 189,893 | 0 | A | C | 5.6% | 879.1 / 25.3 | 274 | intergenic (+55/+102) | PP_0165/PP_0166 | GGDEF domain‑containing protein/HlyD family secretion protein |
| Reads supporting (aligned to +/- strand): ref base A (144/113); new base C (5/12); total (149/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 277 total aligned reads displayed.
GAGTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCTTGAG > NC_002947/189744‑190042 | tCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCg > 2:5266268/1‑150 (MQ=255) agaCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGcc < 1:5055759/150‑1 (MQ=255) aCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCTACGCGGccct < 1:4597509/150‑2 (MQ=255) aCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCTACGCGGccct < 1:964402/150‑2 (MQ=255) cGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCTACGCGGccctt < 1:1378616/150‑3 (MQ=255) ggAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCTACGCGGcccttt < 2:5337012/150‑4 (MQ=255) ggAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCa > 2:33342/1‑150 (MQ=255) ggAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCa > 1:2695810/1‑150 (MQ=255) aaGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAgg < 2:1621290/150‑1 (MQ=255) gAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCAc > 1:1001847/1‑150 (MQ=255) ggTTGGTGTTGCTGGAGATGGGTGTAGGGGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCGTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAg < 1:6355075/150‑1 (MQ=255) gtgtTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGAtt > 2:2088617/1‑150 (MQ=255) gtTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTg > 2:6771271/1‑150 (MQ=255) cTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAgg < 1:2226283/150‑1 (MQ=255) cTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTACCGGCCCCCAGGTTCACGTAGCGATTTGCAgg > 2:1400977/1‑150 (MQ=255) tGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAggg > 2:4261496/1‑150 (MQ=255) tGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAggg > 1:4196738/1‑150 (MQ=255) gttGGGAGTCGGCGGGTTTCCGGGGCAAGGGGTGGGTGAGCCTGCGCCTTGGCGCTGAAGGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAACCGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGgctgc < 1:1532284/148‑1 (MQ=255) gaTGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGgctgc < 2:818168/150‑1 (MQ=255) gaTGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGgctgc > 1:5386852/1‑150 (MQ=255) gggAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTg > 2:3773448/1‑150 (MQ=255) gAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTa < 2:4860035/150‑1 (MQ=255) gTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCTCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACa > 1:4676157/1‑150 (MQ=255) ggggggTTTCTGGGGCAAGTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCATGGGCTAGAGCCGCAAACGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGcc < 1:5874178/147‑1 (MQ=255) ggCGGGTTTCAGGGGCAACTGGTGGGTGAGCCGGCGCCTTGGCGCTGAAGGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGCGCCGCAAACGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGcc < 1:4302457/150‑1 (MQ=255) ggCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGcc > 2:198429/1‑150 (MQ=255) ggCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGcc < 1:1938800/150‑1 (MQ=255) gggATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTg > 1:6241404/1‑150 (MQ=255) ttCTGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgc < 2:361676/150‑1 (MQ=255) ttCAGGGGCAAGGGGTGGGTGAGCCTGCGCCTTGGCGGTGAAGGGCCTCGCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTCGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgc < 1:66774/150‑1 (MQ=255) ttCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgc < 1:4493448/150‑1 (MQ=255) tCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGAAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgcg > 2:5417593/1‑150 (MQ=255) cAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGa > 1:1197354/1‑150 (MQ=255) ggggCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACa > 1:4686141/1‑150 (MQ=255) gggCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACAt > 1:3477033/1‑150 (MQ=255) gCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTCGGCGTGGGCTAGAGCCGCAAACGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGa < 1:5914789/150‑1 (MQ=255) aCTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGc < 2:1826139/150‑1 (MQ=255) tggtggGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCg > 2:2399441/1‑150 (MQ=255) tggtggGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCg > 1:3242631/1‑150 (MQ=255) gtgggtgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTAc < 1:5758854/125‑1 (MQ=255) gtgggtgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCt > 1:6159501/1‑150 (MQ=255) gggtgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAggg > 2:3347790/1‑113 (MQ=255) gtgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTa > 2:4039356/1‑150 (MQ=255) gtgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTa > 2:1717699/1‑150 (MQ=255) tgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGACCTGTCGCGACATGAGGCCGCTCCTaa < 1:6130457/150‑1 (MQ=255) gAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTaaa < 2:6609858/150‑1 (MQ=255) gAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGATAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTaaa < 2:2883565/150‑1 (MQ=255) gCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGc > 1:1772912/1‑150 (MQ=255) ccTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCa > 1:2552772/1‑150 (MQ=255) tGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTATAGCCGAAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAAt < 1:2290139/150‑1 (MQ=255) tGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAAt > 1:2159731/1‑150 (MQ=255) tGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAAt < 1:2011557/150‑1 (MQ=255) tGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAAt > 2:4594904/1‑150 (MQ=255) gcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGc < 2:3977958/150‑1 (MQ=255) gcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGc < 1:5274409/150‑1 (MQ=255) gcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGc < 1:4440326/150‑1 (MQ=255) ccTTGGCGCTGAATGGCCTCTCGCGTGCCGCGGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCg > 2:5511365/1‑150 (MQ=255) cTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGa > 2:4725215/1‑150 (MQ=255) cgcTGACTGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAAccc < 2:4425553/150‑1 (MQ=255) gAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAg > 1:3555775/1‑150 (MQ=255) ccTCTCGCGTGCCGCTGTAGGCGTGGGCTAGCGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGc < 2:4286874/150‑1 (MQ=255) ccTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGc > 1:813334/1‑150 (MQ=255) ccTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGc < 2:4320103/150‑1 (MQ=255) ccTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGc < 2:476844/150‑1 (MQ=255) ccTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGc > 1:5608504/1‑150 (MQ=255) ctctCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCt < 1:4887893/150‑1 (MQ=255) ctcGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTAt < 2:6211196/150‑1 (MQ=255) tcGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATc > 1:4336321/1‑150 (MQ=255) gcgTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCAc > 2:6180632/1‑150 (MQ=255) gcgTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCAc < 2:5136068/150‑1 (MQ=255) gCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCt > 2:613818/1‑150 (MQ=255) cGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTcg > 2:2216725/1‑150 (MQ=255) gCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAgcgc > 1:3046858/1‑150 (MQ=255) tGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTc < 1:1866206/150‑1 (MQ=255) gggCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTcc < 2:35221/150‑1 (MQ=255) gCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGa > 1:1135440/1‑150 (MQ=255) gCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGa > 1:358129/1‑150 (MQ=255) cTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGaa < 2:6069777/150‑1 (MQ=255) tAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAAc > 2:3178791/1‑150 (MQ=255) gagCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAAcgc < 2:5744163/150‑1 (MQ=255) agCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAAcgcg > 2:4503436/1‑150 (MQ=255) ccGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGcc > 2:3818540/1‑150 (MQ=255) cAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTc < 1:3113553/150‑1 (MQ=255) cAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTc < 1:4050984/150‑1 (MQ=255) ctgggggCCGCTACGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa > 2:1660096/5‑150 (MQ=255) ctgggggCCGCTACGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa > 2:2139646/5‑150 (MQ=255) ctgggggCCGCTACGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAAAGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa > 1:721732/5‑150 (MQ=255) aaaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa > 1:5795794/1‑150 (MQ=255) aaaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa < 1:2989385/150‑1 (MQ=255) aaaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa < 1:2088617/150‑1 (MQ=255) aaaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa > 1:1424108/1‑150 (MQ=255) tgggggCCGCTACGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCAt > 2:1166579/4‑150 (MQ=255) aaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCAt < 1:3880670/150‑1 (MQ=255) aaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCAt < 2:2054604/150‑1 (MQ=255) cgcgTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGc > 1:3667189/1‑150 (MQ=255) gcgTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCt > 1:6537848/1‑150 (MQ=255) gcgTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCt < 2:1197354/150‑1 (MQ=255) cgTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGTCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCtt < 2:311434/150‑1 (MQ=255) gTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCTTg < 2:5670007/150‑1 (MQ=255) tAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCTTGa < 2:2695810/150‑1 (MQ=255) | GAGTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCTTGAG > NC_002947/189744‑190042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |