| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,708,239 | A→G | 22.1% | intergenic (+97/‑70) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,708,239 | 0 | A | G | 22.1% | 482.5 / 142.6 | 266 | intergenic (+97/‑70) | lysS/PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (136/53); new base G (37/21); total (173/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01 | |||||||||||
Only 100 of 288 total aligned reads displayed.
CGCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAA > NC_002947/1708090‑1708388 | gCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACAGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAg < 2:1378573/150‑1 (MQ=255) gCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTGTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAg > 2:3798762/1‑150 (MQ=255) cGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGc < 1:974131/150‑1 (MQ=255) gTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGcc > 2:4218243/1‑150 (MQ=255) cGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGATGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑tt < 2:6136043/150‑1 (MQ=255) cGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑tt < 1:5335342/150‑1 (MQ=255) cGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑tt < 2:5623668/150‑1 (MQ=255) gATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTGCTGGCCCCTTCGCGGGTAAACCCGCTCCTAC‑AAGGCC‑tttg < 1:5993586/150‑3 (MQ=38) aTCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACTGGCCCCTTCGCGGGTAAACCCGCTCCTAC‑AAGGCC‑tttgt < 1:2412087/150‑4 (MQ=255) aTCCGCGACGTCATCCTGTTCCCGCACAAGCGTCCGCAGGCCTGAGTGAGCTGAAAGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGGCC‑TTGt < 2:1810510/150‑1 (MQ=255) tCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑GTGT‑a > 2:2614365/1‑150 (MQ=255) gcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGa < 2:3599192/150‑1 (MQ=255) gcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGa < 1:915410/150‑1 (MQ=255) gcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGa < 1:3345308/150‑1 (MQ=255) gcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGa < 1:3860819/150‑1 (MQ=255) gACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGAGc < 1:5847858/150‑1 (MQ=255) gACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGAGc < 1:5510198/150‑1 (MQ=255) gACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGGCC‑TTGT‑AGGAGc < 2:2481555/150‑1 (MQ=255) gACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGc < 1:6182886/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCTGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 2:5546927/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 1:2750341/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 2:3240387/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 2:2454601/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 2:4005328/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 2:4825847/150‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCgg < 1:1228804/150‑1 (MQ=255) gTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGAGCggg < 2:805458/150‑1 (MQ=255) gTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCggg < 1:2932943/150‑1 (MQ=255) tCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCGACAAAGGCC‑GTGT‑AGGAGCGGGGTTa > 1:6087183/1‑150 (MQ=255) tGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑ccc > 2:4470438/1‑150 (MQ=255) gTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑GTGT‑AGGAGCGGGTTTA‑CCcg > 2:1209015/1‑150 (MQ=255) ccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑cc < 1:3161301/144‑1 (MQ=255) gCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCGACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAgg > 2:1494995/1‑150 (MQ=255) aTGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGcc > 2:1666479/1‑150 (MQ=255) tgagtgagCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGGCAGCACTGACGAAaca > 2:3114343/1‑150 (MQ=255) cTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAAACCCCGCCCACAAAGGCC‑GTGTGGGGGGGGGGTTTA‑CCC‑CGAAGGGGGCCGCACGGACGCAACAccccccag > 1:4905500/1‑147 (MQ=255) cTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACAGACGAAACACCCCCATg > 2:5818218/1‑150 (MQ=255) tGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAAACCCCGCCGACAAAGGCC‑GTGT‑AGGGGCGGGTTTA‑CCCGCCCAGGGGCCCGCACAGACGCAACACCCCCAAGa > 1:437180/1‑150 (MQ=255) gAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAg > 2:3077109/1‑150 (MQ=255) aaCGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑GTGG‑AGGAGCGGGTTTA‑CCCGCGCAGGGGCCAGCACGGACGAAACACCCCCATGAgg > 2:4758677/1‑150 (MQ=255) cGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAAGGCC‑GTGT‑AGGAGCGGGTTTT‑CCCCCGAAGGGGCCAGCACAGACGAAACACCCCCCAGAGGTa > 1:455920/1‑150 (MQ=38) gccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATcc > 2:2764076/1‑150 (MQ=255) cgccTTTCGCGGCGGATTTTTCTTGCCTTATGCTTTATGTTTTCTGTACCGGCCTCTTCGCGGTTAAACCCGCTCCTCCACCGGCT‑TTGT‑CGGCGCGGTTTTC‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATcccc < 2:2989460/150‑1 (MQ=255) gAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGacac > 2:2242270/1‑150 (MQ=255) ggcTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGa < 1:2585731/81‑1 (MQ=21) gcTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGGATCCCCCGTGACACCCGCCa > 2:6846354/1‑150 (MQ=255) cTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGG‑TGGAGCGGGTTTA‑CCCGCGTAGGGGCCAGCACTGACGAAAAACCCCCATGAGGTATCCCCCGGGGCACCCGCCAt > 2:5977262/1‑150 (MQ=38) tttttCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCAACAAAGGCC‑TTGT‑TGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGGCGAAACACCCCCATGAGGTATCCCCCGTGTCACCCGCCaag > 1:6236275/1‑148 (MQ=255) tttttCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAAACCCCAACAACAAAGGCC‑GTGT‑AGGCGCGGGTTTA‑CCCCCGAAGGGGCCAGCACTTACGAAAAACCCCCAAGAGGTATCCCCCGTGACAcccccccag > 1:474879/1‑147 (MQ=37) ttGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGG‑AGGAGCGGGTTTA‑CCCGCGCAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGAc > 2:3826898/1‑150 (MQ=255) tGAAGCTTTATGTTGTCAGTACCGGCCTCTTCCCGGGTAAAACCCCACCAACAAAGGCC‑ATGT‑AGGAGCGGGTTTA‑CCCCCCAACGGGCCAGCCCAGACGAAACACCCCCAAGAGGTATCCCCCGTGACACCCCCCAAGCCTGAcccacg > 2:690352/1‑146 (MQ=255) tttATGTTGTCAGTACGGGCATCTTCGCGGGTAAACCCGCTCCTACAACGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGcgccgc < 1:5723192/150‑1 (MQ=255) gtCAGTACCGGCCTCTTCGCGGGTAATACCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTAGCCCCCGTGACACCCCCCATGCCTGGCCAAGGCCCCCCCGGCATcc > 2:5392311/1‑149 (MQ=37) ccGGCCTCTTCGCGGGTAAACCCGCTCCGACAAAGGCC‑GTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCAAGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCAccgc > 2:5034772/1‑150 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑GTGT‑AGGAGCGGGTTTA‑ACCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCCTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCAccgcc > 2:2043054/1‑150 (MQ=255) gggTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGc > 1:563945/1‑150 (MQ=255) tAAACCCGCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTg > 2:5133249/1‑150 (MQ=255) tAAACCCGCCCCTACAACGGCC‑TTGT‑TGGAGGGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCCTGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTg < 1:3400425/150‑1 (MQ=255) aaaCCCGCTCCAAAACCCGCG‑TTTT‑AGGTG‑GGTTTTACCCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGc < 1:113252/150‑1 (MQ=255) cccGCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAt > 2:2722483/1‑150 (MQ=255) cccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAt > 1:246637/1‑150 (MQ=255) cccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAt > 2:3523499/1‑150 (MQ=255) cccGCTCCTACAAAGGCC‑GTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCact > 2:4609315/1‑148 (MQ=255) ccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:889504/1‑150 (MQ=255) ccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:3656605/1‑150 (MQ=255) ccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:1543595/1‑150 (MQ=255) ccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:2650333/1‑150 (MQ=255) ccGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCAGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:1684409/1‑150 (MQ=255) gCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:644797/1‑150 (MQ=255) gCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:2882199/1‑150 (MQ=255) gCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCAGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:3263886/1‑150 (MQ=255) gCTCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:222648/1‑150 (MQ=38) gCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:745126/1‑150 (MQ=255) gCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:4058791/1‑150 (MQ=255) gCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:1416198/1‑150 (MQ=255) gCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:4321560/1‑150 (MQ=255) gCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:5472526/1‑150 (MQ=255) tCCTACCACGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa < 2:533529/150‑1 (MQ=255) tCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCACTACCaa > 2:5910368/1‑150 (MQ=255) tCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 2:6059119/1‑150 (MQ=255) tCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:5272995/1‑150 (MQ=255) tCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 2:6625163/1‑150 (MQ=255) tCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGACAAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 2:3411830/1‑150 (MQ=37) tCCTACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:2071762/1‑150 (MQ=255) tCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCCTGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa < 2:6268541/150‑1 (MQ=255) tCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 2:132383/1‑150 (MQ=255) ccTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAg > 1:6351047/1‑150 (MQ=255) tACAAGGCCT‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 1:3486530/1‑150 (MQ=255) tACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 1:1329218/1‑150 (MQ=255) aCAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCTCCGAAAGCGTGCAATACCAAGGcc > 1:713911/1‑150 (MQ=255) aCAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGcc > 2:1860412/1‑150 (MQ=255) cAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCg > 2:2314104/1‑150 (MQ=255) acaaGGCCTTTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGcc > 2:4229621/3‑150 (MQ=255) acaaGGCCTTTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGcc > 1:5031221/3‑150 (MQ=255) aaaGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:622233/1‑150 (MQ=255) aaaGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:5913034/1‑150 (MQ=255) aaaGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:4186267/1‑150 (MQ=255) aaaGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:6565921/1‑150 (MQ=255) aaaGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:6730968/1‑150 (MQ=255) aaaGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:322747/1‑150 (MQ=255) | CGCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGT‑AGGAGCGGGTTTA‑CCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAA > NC_002947/1708090‑1708388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |