Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,756,070 T→G 5.7% P146P (CCT→CCG)  PP_1551 → replication protein O

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,756,0700TG 5.7% 913.1 / 34.0 310P146P (CCT→CCG) PP_1551replication protein O
Reads supporting (aligned to +/- strand):  ref base T (151/139);  new base G (10/9);  total (162/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.74e-01

Only 100 of 335 total aligned reads displayed.

GACCCGAAGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCAA  >  NC_002947/1755921‑1756219
                                                                                                                                                      |                                                                                                                                                     
 aCCCGAAGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATcttcctt                                                                                                                                                      <  1:3777387/150‑1 (MQ=255)
  cccGAAGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATcttccttc                                                                                                                                                     <  1:976617/150‑1 (MQ=255)
  cccGAAGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATcttccttc                                                                                                                                                     <  1:4610539/150‑1 (MQ=255)
   ccGAAGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCg                                                                                                                                                    <  2:4473015/150‑1 (MQ=255)
      aaGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGaa                                                                                                                                                 <  2:522626/150‑1 (MQ=255)
          aCTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATg                                                                                                                                             >  1:3363746/1‑150 (MQ=255)
            tGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGtt                                                                                                                                           <  1:3537463/150‑1 (MQ=255)
            tGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTGTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGtt                                                                                                                                           >  2:2384488/1‑150 (MQ=255)
             ggATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTa                                                                                                                                          <  1:1092221/150‑1 (MQ=255)
             ggATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCGAAGGAAGAtttac                                                                                                                                          <  2:728982/150‑5 (MQ=255)
               aTTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCGAAGGAAGAT‑TTACAt                                                                                                                                       <  1:2813068/150‑1 (MQ=255)
                     gTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGACTCGGCTCAGAGTCGAAACAGACCAAACCCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAACATCTTCCGAAGGAAGAT‑TTACAtagggg                                                                                                                                  <  2:1499910/150‑6 (MQ=255)
                     gTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAACCCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGaccc                                                                                                                                  >  2:5577709/1‑150 (MQ=255)
                     gTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGcccc                                                                                                                                  <  2:679113/150‑1 (MQ=255)
                     gTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGcccc                                                                                                                                  >  1:1817027/1‑150 (MQ=255)
                     gTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGcccc                                                                                                                                  <  1:6802613/150‑1 (MQ=255)
                     gTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCATCGGAAGATGGTACATGcccc                                                                                                                                  >  2:438221/1‑150 (MQ=255)
                      ttGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGccccc                                                                                                                                 <  1:1670731/150‑1 (MQ=255)
                         aTCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATTCCCCCCCa                                                                                                                              >  2:5949435/1‑150 (MQ=255)
                         aTCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCa                                                                                                                              <  2:4197888/150‑1 (MQ=255)
                         aTCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCa                                                                                                                              <  1:3613221/150‑1 (MQ=255)
                          tCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAg                                                                                                                             >  2:6472412/1‑150 (MQ=255)
                             gAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCga                                                                                                                          <  1:68923/150‑1 (MQ=255)
                              aaaCAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTAAGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCgag                                                                                                                         >  2:3036898/1‑150 (MQ=255)
                               aaCAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCgagc                                                                                                                        <  1:1246683/150‑1 (MQ=255)
                                      cAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCgagccggagcc                                                                                                                 <  2:2442303/150‑1 (MQ=255)
                                      cAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCgagccggagcc                                                                                                                 >  2:3981164/1‑150 (MQ=255)
                                        cttcAGCCGAGTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAGACCCCCTATGTAA‑ATCTTCCTTCGGACGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGa                                                                                                               >  2:3833802/4‑150 (MQ=255)
                                          aCAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCCGCgagccggacccccca                                                                                                             >  1:100465/1‑146 (MQ=255)
                                              ccGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTATGAAAGAAACCCCCGATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCCGCGAGCCGGCGCCGCCTCCgg                                                                                                         >  1:1490905/1‑150 (MQ=255)
                                               cGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGc                                                                                                        <  2:3197981/150‑1 (MQ=255)
                                                gACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATcttcctt                                                                                                                                                      >  2:2825326/1‑103 (MQ=255)
                                                gACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGcc                                                                                                       <  2:1327067/150‑1 (MQ=255)
                                                gACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGcc                                                                                                       >  1:1786718/1‑150 (MQ=255)
                                                 aCTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGTCGGCTCCGGctc                                                                                                      <  1:5700721/150‑3 (MQ=255)
                                                  cTCGGCTGAAGGGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCATTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCaa                                                                                                     <  2:6089850/150‑1 (MQ=255)
                                                      gCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGGGCCGGAGTCGGCTCCGGctcgctgg                                                                                                 <  1:1389688/150‑8 (MQ=255)
                                                      gCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGAt                                                                                                 <  2:5788856/150‑1 (MQ=255)
                                                      gCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGAt                                                                                                 <  1:545421/150‑1 (MQ=255)
                                                        tGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGa                                                                                               <  1:806709/150‑1 (MQ=255)
                                                          aaGTGTTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAgc                                                                                             <  2:2697367/150‑1 (MQ=255)
                                                              ggTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCCGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCaa                                                                                         <  2:2277978/150‑1 (MQ=255)
                                                               gTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAg                                                                                        >  2:765117/1‑150 (MQ=255)
                                                                  cGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCt                                                                                     <  1:3168623/150‑1 (MQ=255)
                                                                   gAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTc                                                                                    <  2:5187235/150‑1 (MQ=255)
                                                                    aaTCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTcc                                                                                   <  2:3291657/150‑1 (MQ=255)
                                                                          cTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCgg                                                                             <  2:6157936/150‑1 (MQ=255)
                                                                                gTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAgc                                                                       <  2:683078/150‑1 (MQ=255)
                                                                                gTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACGCCGGCCCAGGAGGAGCGCAAGGCGCCCAACGGCCAAgc                                                                       >  1:6771619/1‑150 (MQ=255)
                                                                                   gAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCGTCGGCACAgccgc                                                                    >  1:4644538/1‑150 (MQ=255)
                                                                                     aaCAGACCAAAACCGCCGACTCCCGTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCAGCGGCAAAgccgccc                                                                  >  1:6401123/1‑149 (MQ=255)
                                                                                          aCCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTg                                                             <  1:6555265/150‑1 (MQ=255)
                                                                                           ccAAAACCGCCGACTCCCTTCTTTATTCTAAGATAGACACCCCCTATGTAA‑ATCTTCCGGCGGAAGATGTGGCATGCCGCCCCAGCGGGCCGGGGCCGACTCCGGCCCAGGATGAGCGCGAGGCTCCCTGCGGCAAAGCCGCCCTGCTgg                                                            >  2:3960044/1‑150 (MQ=255)
                                                                                           ccAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCCACGAAGAGCGCAAGGCTCCCTTCCGCACAGCCGCCAAGCTgg                                                            >  1:6218315/1‑150 (MQ=255)
                                                                                             aaaaCCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGcc                                                          <  2:1645666/150‑1 (MQ=255)
                                                                                              aaaCCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCg                                                         <  1:2575762/150‑1 (MQ=255)
                                                                                               aaCCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGa                                                        <  1:3132909/150‑1 (MQ=255)
                                                                                                  cgccgACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCCGCCCAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACaa                                                     >  1:2775237/1‑150 (MQ=255)
                                                                                                        cTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCa                                               >  2:6700543/1‑150 (MQ=255)
                                                                                                         tCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCCGAGCCGACGCCCGCCCACGATGAGCGCAAGGCTCCCGTCGGCACAGCCGCCAAGCTGGCCCACAAACCCCAc                                              >  1:2639122/1‑150 (MQ=255)
                                                                                                           ccTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACgg                                            <  2:4925883/150‑1 (MQ=255)
                                                                                                           ccTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCAAGCTGGCCGACAATCCGCACgg                                            >  1:1552153/1‑150 (MQ=255)
                                                                                                             ttcttTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCAAGCTGGCCGACACACCGCACGGGc                                          >  1:4341908/1‑150 (MQ=255)
                                                                                                             ttcttTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCCGAGCCGACTCCCGCCAAGGATGAGCGCAAGGCTCCCGTCGGCAAACCCGCCATGCTGGCCGACAATCCGCACGGGc                                          >  1:2239259/1‑150 (MQ=255)
                                                                                                             ttcttTATTCTAAGAAAGAAACCCCCTATGTAA‑ATATTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCCACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGc                                          >  2:3853807/1‑150 (MQ=255)
                                                                                                                  tATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGCCTCCCGCCAAGGATGAGCGCAAGGCTCCCTGAGGCAAAGCCGCCAAGCTGGCCGACAATCCCCACGGGCTCGaa                                     >  1:2968873/1‑149 (MQ=255)
                                                                                                                    ttCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGa                                   <  1:851210/150‑1 (MQ=255)
                                                                                                                    ttCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACACCGGCCAACGATGAGCCCAACGCTCCCAACGGCAAAGCCCCCAAGCAGGCCGACAATCCGCACCGGCTCGAAGa                                   >  1:5165048/1‑150 (MQ=255)
                                                                                                                     tCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGaa                                  <  1:4039705/150‑1 (MQ=255)
                                                                                                                      cTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAAt                                 <  1:3488087/150‑1 (MQ=255)
                                                                                                                       tAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGCAGCCGACTCCGGCCAACGATGAGCGCAAGGCTCCCTACGGCAAAGCCGCCAAGAAGGCCGACAAACCGCACCGGCTCGAAGAAta                                >  1:5362805/1‑149 (MQ=255)
                                                                                                                       tAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCCGAGCCCACGCCGCCCAAGGAAGAGCGCAAGCCGACCAAAGGCAAACCCCCCAAGCAGGCCGACAAACCCCACGCCCACGATGAATc                                >  1:2861781/1‑150 (MQ=255)
                                                                                                                       tAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCCGACCCGACTCCCGCCAAGGCTGAGCGCAAGGCACCCTTCGGCAAAGCCGCCCTGCTGGCCGACAATCCCCACGGGCTCGATGaaac                                >  2:3721791/1‑148 (MQ=255)
                                                                                                                       tAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACAAGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGcc                                                          >  2:2776249/1‑124 (MQ=255)
                                                                                                                        aagaaagaAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATcc                               <  1:4233765/150‑1 (MQ=255)
                                                                                                                         agaaagaaACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATccc                              <  2:1950776/150‑1 (MQ=255)
                                                                                                                         agaaagaaACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCACGATGAATccc                              >  2:2577002/1‑150 (MQ=255)
                                                                                                                          gaaagaaaCCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCACGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCt                             <  2:5665401/150‑1 (MQ=255)
                                                                                                                            aagaaaCCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGa                           <  1:1946373/150‑1 (MQ=255)
                                                                                                                              gaaaCCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATc                         <  2:3548480/150‑1 (MQ=255)
                                                                                                                                 aCCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCCAGGATGAGCGCCAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACACTCCGCACGGGCTCGAAGAATCCCAGATCGCt                      >  2:6294326/1‑150 (MQ=255)
                                                                                                                                 aCCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACGCCGGCCAAGGATGAGCGCAAGGCTCCCGTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCt                      >  2:850491/1‑150 (MQ=255)
                                                                                                                                   ccccTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGa                    <  1:3981164/150‑1 (MQ=255)
                                                                                                                                    cccTATGTAA‑ATCTTCATTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGAt                   >  1:3850909/1‑150 (MQ=255)
                                                                                                                                      cTATGTAC‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTa                 <  1:5950672/150‑1 (MQ=255)
                                                                                                                                        aTGTAACATCTTCCGAAGGAAGAT‑TTACATGCCCCCCCAGCGAGCCGGAGCCGACTACGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATACCTGATCTCTGATTaat               >  1:1202595/1‑148 (MQ=255)
                                                                                                                                         tGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACtt              <  1:2168361/150‑1 (MQ=255)
                                                                                                                                          gTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTg             >  2:112961/1‑150 (MQ=255)
                                                                                                                                           taacaTCTTCCGAAGGAAGATTTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATACCTGATCGCTGATTACTTg             >  1:6002797/5‑150 (MQ=255)
                                                                                                                                           taacaTCTTCCGAAGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTg             >  2:4989350/5‑150 (MQ=255)
                                                                                                                                           tAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTgg            <  1:5871403/150‑1 (MQ=255)
                                                                                                                                           tAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTgg            <  2:5385883/150‑1 (MQ=255)
                                                                                                                                              caTCTTCCGAAGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCt          >  1:6065197/2‑150 (MQ=255)
                                                                                                                                               aTCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTg         >  2:1735338/1‑150 (MQ=255)
                                                                                                                                                    ccttcGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGc    >  2:2607579/1‑150 (MQ=255)
                                                                                                                                                     cttcGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCa   >  1:491381/1‑150 (MQ=255)
                                                                                                                                                      ttcGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCaa  >  2:4087377/1‑150 (MQ=255)
                                                                                                                                                      ttcGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCaa  >  1:1849038/1‑150 (MQ=255)
                                                                                                                                                      ttcGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCaa  <  2:4722220/150‑1 (MQ=255)
                                                                                                                                                      ttcGGAAGATGTTACATGCCCCCCAAGCGAGCAGGAGCCGACTCCGGCCAAGGATGAGCGCAATGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAAACAGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCaa  >  2:3477622/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GACCCGAAGGACTGGATTTACGTTGATCCGAAACAGACCAAAACAGCCGACTCGGCTGAAGTGGTCCGAATCGGCTCAGAGTCGAAACAGACCAAAACCGCCGACTCCCTTCTTTATTCTAAGAAAGAAACCCCCTATGTAA‑ATCTTCCTTCGGAAGATGTTACATGCCCCCCCAGCGAGCCGGAGCCGACTCCGGCCAAGGATGAGCGCAAGGCTCCCTTCGGCAAAGCCGCCATGCTGGCCGACAATCCGCACGGGCTCGATGAATCCCTGATCGCTGATTACTTGGCTGTCCGCAA  >  NC_002947/1755921‑1756219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑