Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,843,118 C→A 5.1% intergenic (+74/+30) PP_1642 → / ← PP_1643 hypothetical protein/membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,843,1180CA 5.1% 881.7 / 20.7 260intergenic (+74/+30)PP_1642/PP_1643hypothetical protein/membrane protein
Reads supporting (aligned to +/- strand):  ref base C (154/92);  new base A (7/7);  total (161/99)
Fisher's exact test for biased strand distribution p-value = 4.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

CAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGC  >  NC_002947/1842969‑1843267
                                                                                                                                                      |                                                                                                                                                     
 aaCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTAcc                                                                                                                                                      >  1:1575378/1‑150 (MQ=255)
 aaCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTAcc                                                                                                                                                      >  2:6795892/1‑150 (MQ=255)
 aaCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCGTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCCCTGAAGGCCGGTGCCGTAcc                                                                                                                                                      >  1:258807/1‑150 (MQ=255)
  aCCAGTGGCATGCAGAGAGTGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCt                                                                                                                                                     >  1:3093769/1‑150 (MQ=255)
  aCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCt                                                                                                                                                     <  2:736067/150‑1 (MQ=255)
   ccAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCtg                                                                                                                                                    >  2:2880086/1‑150 (MQ=255)
            tGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCgg                                                                                                                                           <  2:3703800/150‑1 (MQ=255)
            tGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCgg                                                                                                                                           <  2:1097427/150‑1 (MQ=18)
               agagagCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCg                                                                                                                                        >  2:4280219/1‑150 (MQ=255)
                  gagCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGc                                                                                                                                     >  1:5239465/1‑150 (MQ=255)
                   agCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGcc                                                                                                                                    >  1:5807959/1‑150 (MQ=255)
                    gcgggcggCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGccc                                                                                                                                   <  2:5512125/150‑1 (MQ=17)
                      gggcggCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCcgc                                                                                                                                 >  1:3161977/1‑150 (MQ=255)
                            ccGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGacaag                                                                                                                           >  1:146628/1‑149 (MQ=255)
                                 gtgCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTaa                                                                                                                      <  2:1550721/150‑1 (MQ=255)
                                  tgCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAAc                                                                                                                     >  2:654918/1‑150 (MQ=255)
                                    ccAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTg                                                                                                                   >  2:4686846/1‑150 (MQ=255)
                                      aGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGcc                                                                                                                 >  1:818691/1‑150 (MQ=255)
                                           tCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgc                                                                                                            >  2:586149/1‑150 (MQ=255)
                                             ggTGATGCTGGCGCACCCCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgccc                                                                                                          <  2:6295506/150‑1 (MQ=255)
                                              gTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCGGGGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgcccg                                                                                                         >  1:103001/1‑150 (MQ=255)
                                                   gCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCTTGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAACAATCTAACTGCCTGCGCCCGCCagg                                                                                                    >  2:4544102/1‑148 (MQ=255)
                                                   gCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATg                                                                                                    >  2:225759/1‑150 (MQ=255)
                                                     tGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgcg                                                                                                  >  1:3696538/1‑150 (MQ=255)
                                                     tGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgcg                                                                                                  >  1:1167682/1‑150 (MQ=255)
                                                         gcACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgcc                                                                                                           >  2:3390061/1‑137 (MQ=255)
                                                         gcACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgcc                                                                                                           <  1:3390061/137‑1 (MQ=255)
                                                         gcACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGcgccgc                                                                                              >  2:5175940/1‑150 (MQ=255)
                                                           acacCGTCACCATTTGAGCCTTGTGTTGCTCCCCTTCGCGGGCTTGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGGGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTc                                                                                            <  1:6353283/150‑1 (MQ=38)
                                                            cacCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCa                                                                                           >  1:2152774/1‑150 (MQ=255)
                                                               cGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGc                                                                                        >  2:2651873/1‑150 (MQ=255)
                                                               cGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCAGGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGc                                                                                        <  1:1899727/150‑1 (MQ=255)
                                                               cGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGACATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGc                                                                                        >  1:5031252/1‑150 (MQ=255)
                                                                gTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCt                                                                                       >  2:2140656/1‑150 (MQ=255)
                                                                 tCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTg                                                                                      <  1:3257066/150‑1 (MQ=255)
                                                                 ccaccccttGCGCCTTGTGGTGCTCCCCTGCGCGGGCAGGCCCGCTCCCACAGTAAACGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTg                                                                                      <  1:5529289/143‑1 (MQ=38)
                                                                  cAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTgg                                                                                     <  1:2256546/150‑1 (MQ=255)
                                                                    aCCTTTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGaa                                                                                   <  1:5096460/150‑1 (MQ=255)
                                                                     ccATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAAc                                                                                  <  1:986910/150‑1 (MQ=255)
                                                                       aTTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACtt                                                                                >  2:4570005/1‑150 (MQ=255)
                                                                        ttGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTc                                                                               <  1:2971387/150‑1 (MQ=255)
                                                                          gAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCa                                                                             <  2:5730529/150‑1 (MQ=255)
                                                                            gCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAgc                                                                           >  1:5627994/1‑150 (MQ=255)
                                                                                 gtgtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACg                                                                      <  1:1086820/150‑1 (MQ=255)
                                                                                   gtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTa                                                                    <  2:2206563/150‑1 (MQ=255)
                                                                                   gtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTa                                                                    >  2:6504442/1‑150 (MQ=255)
                                                                                      gCTCCCATTCGCGGGCATGCCCGCTCCCCCAGTAATCGCACCGCACTTAAGGCCGGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAg                                                                 <  2:258807/150‑1 (MQ=255)
                                                                                      gCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCGGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACAGCCTTCGCCCGCCAAGCGCCGCGCCTGCTGGAACTTCCAGCGCACGTACAg                                                                 >  1:200320/1‑150 (MQ=38)
                                                                                        tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTa                                                               >  1:3151576/1‑150 (MQ=255)
                                                                                        tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTa                                                               >  1:500439/1‑150 (MQ=255)
                                                                                        tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTa                                                               >  1:4589542/1‑150 (MQ=255)
                                                                                        tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTa                                                               >  1:3852983/1‑150 (MQ=255)
                                                                                           cATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGcc                                                            >  2:380230/1‑150 (MQ=255)
                                                                                            aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGccc                                                           <  1:1557884/150‑1 (MQ=255)
                                                                                            aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGccc                                                           <  1:3345156/150‑1 (MQ=255)
                                                                                            aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGccc                                                           <  2:5013551/150‑1 (MQ=255)
                                                                                                 cgGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCaa                                                      >  1:6739310/1‑150 (MQ=17)
                                                                                                  gggCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAAt                                                     <  2:4968996/150‑1 (MQ=255)
                                                                                                  gggCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAAt                                                     >  1:6803569/1‑150 (MQ=17)
                                                                                                    gCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGa                                                   >  2:5999416/1‑150 (MQ=255)
                                                                                                     cATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGaa                                                  <  2:1854634/150‑1 (MQ=255)
                                                                                                     cATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGaa                                                  <  1:4569810/150‑1 (MQ=255)
                                                                                                     cATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGaa                                                  <  2:2573915/150‑1 (MQ=255)
                                                                                                      aggCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAAc                                                 <  1:4129934/148‑1 (MQ=255)
                                                                                                       tGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACa                                                <  1:5156367/150‑1 (MQ=255)
                                                                                                        gCCCGCTCCCACAGTAATCGCACCGCGCTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAg                                               <  2:1037814/150‑1 (MQ=255)
                                                                                                        gCCCGCTCCCACAGTAATCGCACCGCGCTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAg                                               <  2:4121420/150‑1 (MQ=255)
                                                                                                        gCCCGCTCCCACAGGGACTGCACAGGCCTTAAGTGCGGTGCGAGTCCTGTGGGAGCGGGCATGCCCGCGCAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCCATGAACAg                                               >  2:1134945/1‑150 (MQ=18)
                                                                                                          ccGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGcc                                             >  1:4167962/1‑150 (MQ=255)
                                                                                                            gCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGcccc                                           >  2:5628258/1‑150 (MQ=255)
                                                                                                              tCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAg                                         >  1:3871034/1‑150 (MQ=255)
                                                                                                              tCCCACAGTAATCGCACCGCACTTAAGGCCTGAGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCAAGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAg                                         >  2:6209740/1‑150 (MQ=255)
                                                                                                               cccACCGTACTCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAgg                                        <  1:1955493/150‑1 (MQ=255)
                                                                                                                ccACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATc                                                                                                                         >  2:5018780/1‑68 (MQ=255)
                                                                                                                ccACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATc                                                                                                                         <  1:5018663/68‑1 (MQ=255)
                                                                                                                ccACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGc                                       >  1:4603019/1‑150 (MQ=255)
                                                                                                                 cacaGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCt                                      >  2:3269854/1‑150 (MQ=255)
                                                                                                                 cacaGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCt                                      >  1:182388/1‑150 (MQ=255)
                                                                                                                 cacaGTAATCGCACCGCACTGAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCt                                      >  2:2894971/1‑150 (MQ=255)
                                                                                                                  acaGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTc                                     >  1:844017/1‑150 (MQ=255)
                                                                                                                  acaGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTc                                     >  2:1971762/1‑150 (MQ=255)
                                                                                                                    aGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCAc                                   <  2:1367917/150‑1 (MQ=255)
                                                                                                                     gTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCAcc                                  <  1:3694214/150‑1 (MQ=255)
                                                                                                                      tAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCa                                 >  2:846855/1‑150 (MQ=255)
                                                                                                                        aTCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGc                               >  1:4011884/1‑150 (MQ=255)
                                                                                                                            caccgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACtt                           <  1:614753/150‑1 (MQ=255)
                                                                                                                            caccgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACtt                           >  1:2441850/1‑150 (MQ=255)
                                                                                                                             accgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTc                          >  1:2718019/1‑150 (MQ=255)
                                                                                                                             accgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCACGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGAGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTc                          >  2:70794/1‑150 (MQ=255)
                                                                                                                              ccgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCa                         >  2:2364411/1‑150 (MQ=255)
                                                                                                                               cgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCaa                        <  2:3631436/150‑1 (MQ=255)
                                                                                                                               cgcacTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTAACCAGCACTTCaa                        >  1:3478805/1‑150 (MQ=255)
                                                                                                                                    ttAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAagccag                   >  2:4446229/1‑150 (MQ=255)
                                                                                                                                    ttAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAagccag                   >  1:554880/1‑150 (MQ=255)
                                                                                                                                     tAAGGCCTGTGCAGTACCTGTGGGTGGGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAagccagc                  <  1:3619786/150‑1 (MQ=255)
                                                                                                                                         aaaagtccAGTACCTGAGGGAGCGGGCGTGCACGCGAAAAATCTAACTGCCTTAGCCCGCCATGCGCCGCTCATGCAGGAACTACCAGCGCACGAACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACATCAAGCCAGCCGaa              >  2:5807335/8‑150 (MQ=255)
                                                                                                                                               gCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATAccgc        <  1:5850205/150‑1 (MQ=255)
                                                                                                                                                  aGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATAccgccc      >  2:6685525/1‑150 (MQ=255)
                                                                                                                                                  aGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATAccgccc      >  1:5444153/1‑150 (MQ=255)
                                                                                                                                                    tACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATAccgcccgc    <  2:1139058/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGC  >  NC_002947/1842969‑1843267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: