| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,911,733 | A→C | 6.8% | intergenic (+82/+46) | nirD → / ← PP_1707 | nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,911,733 | 0 | A | C | 6.8% | 659.6 / 3.0 | 227 | intergenic (+82/+46) | nirD/PP_1707 | nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base A (99/105); new base C (6/17); total (105/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
GGCAGAGGTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGTGGCACTGGCGC > NC_002947/1911587‑1911882 | gCAGAGGTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCt < 2:1727412/150‑1 (MQ=255) gCAGAGGTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCt < 2:4639110/150‑1 (MQ=255) agGTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTgg < 2:4897950/150‑1 (MQ=255) agGTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTgg < 2:1907540/150‑1 (MQ=255) gTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGa < 1:6142162/150‑1 (MQ=255) gTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGa < 1:5420711/150‑1 (MQ=255) gCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCg < 1:532098/150‑1 (MQ=255) cGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCgg < 2:1138692/150‑1 (MQ=255) tggtggtggccagcctggtggatgtgtttgccgggcgcacgccgcaggggttggttatctagtcggcttgtgctGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCggg > 1:1507547‑M1/75‑150 (MQ=255) tggtggtggccagcctggtggatgtgtttgccgggcgcacgccgcaggggttggttatctagtcggcttgtgctGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCggg > 1:2171574‑M1/75‑150 (MQ=255) gggTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGGAACCCCCCGCCCACGGGAAAGGGACCGCCGGGGTCTTCGGCGCCCACCCAGTGGGGGCggg > 2:584234/1‑150 (MQ=255) gggTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCggg < 2:920147/150‑1 (MQ=255) gggTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCggg < 2:3695600/150‑1 (MQ=255) gggTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCggg < 2:5144226/150‑1 (MQ=255) gggTGGGGCCGGTGCGGCTGCAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGCTACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCggg < 2:6181726/150‑1 (MQ=255) ggtggtggccagcctggtggatgtgtttgccgggcgcacgccgcaggggttggttatctagtcggcttgtgctGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGc > 2:6028699‑M1/74‑150 (MQ=255) ggtggtggccagcctggtggatgtgtttgccgggcgcacgccgcaggggttggttatctagtcggcttgtgctGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGc > 1:5289731‑M1/74‑150 (MQ=255) ggtggtggccagcctggtggatgtgtttgccgggcgcacgccgcaggggttggttatctagtcggcttgtgccGGCCTCTTCGCGGGCAAGCCCGCTCCTCCGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGc > 1:309119‑M1/74‑150 (MQ=255) tgtgGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCCCTCCTACGGAATAAGCACCGCCTTGTAATACGGCGCCGACCCAGTGGGAGCGGGCtt > 2:3811918/1‑150 (MQ=255) tgGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGcaagc < 1:6393709/150‑5 (MQ=255) tgGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGcaagc < 1:2816420/150‑5 (MQ=255) tgGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGc < 1:3535337/150‑1 (MQ=255) ggCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGcc < 2:361976/150‑1 (MQ=255) ggCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGcc < 2:2349566/150‑1 (MQ=255) ggCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGcc < 2:476519/150‑1 (MQ=255) gCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCGTCGCGGGGGCGCCCCCGCCAACCGGAAATTCACCCCCAGGGAAAACGGGGCCGACCCCGGGGGGGCGGGGGTGccc > 1:4286059/1‑150 (MQ=255) cGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCGACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCcgc < 2:423614/150‑1 (MQ=255) tGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCAAGCCcgctcc < 1:3395568/150‑4 (MQ=255) cGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAaga < 2:5662364/150‑1 (MQ=255) gacgggggAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCa < 2:3955407/147‑1 (MQ=255) aGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCTGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCCGc > 2:2687764/1‑150 (MQ=255) aGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCCCGCCAACGGAAAATGCACCCCCGTTTAATAAGGCGCCGACCCAGTGGGGGCGGGCGTGCCCCCGAAGACGccccc > 2:1311720/1‑147 (MQ=255) ggggAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTGCGCGGGCAAGCCCGCTCCTCCGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTGGCCCGCGAAGAGGCCAGcac < 2:940144/150‑1 (MQ=255) gtgggggtggtGCTGGGGTTGGCCTTATACCCCTTTGCTGCGTGTGCGGGCCTCTTCGCGGGCACGCCGGCTCCTACGGATTCTGCACCGCCTTGTAATAGGGCGCCGACCCTGTGGGAGCGGGGTGGCCCGCGAAGAGGCCAGCACAAg < 2:140762/145‑1 (MQ=255) ggTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCGGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGAc < 2:2786294/150‑1 (MQ=255) tGGAGGTGGGGGTGGCGTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTGGGGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTTTAATACGGCGCCGCCCCTGTGGGCGCGGGGTGGCCCGCGAAGAGGCCAGCACAAGCCGACTa < 2:1824970/150‑1 (MQ=255) aGCTGGCGGGGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGAt < 2:6818378/150‑1 (MQ=255) acgcggcaggggttggttatctagtcggcctgtgccGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCGGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATaa > 2:5533681‑M1/37‑150 (MQ=255) cTGATACCCCTTTGCTGCCTGTGCCGGCCTCGTCGCGGGCCACCCCCCGCCAAACGCATAAGCACCCCCGAGTTAAAAAGCGCCCCCCCAGGGGGGGCGGGCGTGGCCCCGCAGAGGCCACCCCAAACCGCCAAGATAAACAACCCCCgc > 2:3038480/1‑150 (MQ=255) cTGATACCCCTTTGCTGCCTGGGCCGGCCTCTTCGCGGGCACGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATCCGGCGCCGACCCTGTGGGCGCGGGCTGGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTgc < 1:1091713/150‑1 (MQ=39) tGATACCCCTGAGCTGCATGTGCCGGCCTCTTAGCCGGCCAGCCCGCACCATCGGAATCAGCACCGCCGTGTAATGCGGCGCCGACCCGGTGGGAGCGGGCGTGCCCCCGAAGAGGCCAGCACAAGCCGCCGCGATTACCCACCCCGgcg > 2:1058303/1‑150 (MQ=19) cccTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAACACCGCTACTACGGAAACATGACCGCCGTGGAAATCGGCGCCGACCCGGTTGGCGCGGGCATTCCCGCGAAGAGGCCAGCACAATCCGACAAGAAAAACAACCCCAGCGGCGTgc > 2:6673592/1‑150 (MQ=255) tgctgcCGGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAAACGGCACCGCCTTGTAATCCGGCGCCGACCCGGTGGGAGCGGGCTGGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCg < 1:5071262/150‑1 (MQ=38) tgcCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCCAAGAGGCCAGCACAAGCCGCCTAGATAACCAACCCCTGCGGCGTGCGCCCGGCa > 2:6834413/1‑150 (MQ=255) ccTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGCCCCTGTGGGCGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCaaa < 2:3255894/150‑1 (MQ=255) GCCTCTTCGCGGGCAAGCCCCCTACAACGGAATCTGCCCCGCCTTGTAAAACGGCGCCGACCCTGGGGGAGCGGGCTTTCCCGCGAAGAGGCCACCACAAGCCGACAAGGTAAACAACCCCTGCGGCGTGCGCCCGGCAAACACATccac < 2:4200216‑M1/150‑1 (MQ=255) CCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCGGTGGGAGCGGGCGTGCCCGCGCAGAGGCCAGCACAAGCCCACTAGATAACCAACCCCAGCGGCGTGCGCCCGGCAAACACATccacc < 2:4165017‑M1/150‑1 (MQ=255) CTCTTGGGGGGCAAGCCGGCTCCTAGGGACTCTGCACCGCCTTGTTATACGGCGCCGACCGTGTGGGCGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATccacca > 1:6634424‑M1/1‑150 (MQ=255) CTCTTCGCGGGCAATCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCAGCGGCGTGCGCCCGGCAAACACATccacca < 2:4411312‑M1/150‑1 (MQ=255) tctTCGCGGGCAAGCCCGCTCCGACGGACTCTGCACCGCCGTGTAATACGGCGCCGCCCCGGTGGGAGCGGGCTTGCCCGCGACGAGGCCACCACAAGCCGACGAGATAACCAACCCCAGCGGCGTGCGCCCGGCAAACACATCCACCAg > 2:4304943/1‑150 (MQ=255) TCTTCGCGGGCAAGCCCCCTCCTACCGAAACTGCACCGCCATGTAATACGGCGCCGACCCGGTGGGAGCGGGCTTGCCCCCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCAGCGGCGTGCGCCCGGCAAACACATCCACCAg < 2:1462529‑M1/150‑1 (MQ=255) gtccgcgGGCACGCCCGCTCCTCGGTAATCGCCCCCGCTTTTTAATCCGGCGCCGCCCGGGTGGGCGGGGGCTGGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAgg < 1:4823229/147‑1 (MQ=255) TCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGACGAGGCCAGCACCAGCCGACTAGAAAACCAACCCCTGCGGCGTGCGCCCGGCCAACACATCCCCCAGGCt < 2:5908544‑M1/150‑1 (MQ=255) GGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGTCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGcc < 1:1491664‑M1/150‑1 (MQ=255) GGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGcc < 2:3870211‑M1/150‑1 (MQ=255) ggcttGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGcca < 2:1589104‑M1/145‑1 (MQ=255) GGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGcca < 1:1582332‑M1/150‑1 (MQ=255) GCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGccac < 1:195554‑M1/150‑1 (MQ=255) cccgcccgcccCTCCGTAATCTGCCCGGCGTTGTATTCGGGCGCCGCCGGGGGGGGGGGGGGCGCCCCCGCGACGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGccacc < 1:584878/147‑1 (MQ=255) CAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGccacc < 1:4632163‑M1/150‑1 (MQ=255) AAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGccacca < 1:3353250‑M1/150‑1 (MQ=255) GCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGccaccacc < 2:5396741‑M1/150‑1 (MQ=255) GCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGccaccacc < 2:3847275‑M1/150‑1 (MQ=255) CCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCAt < 1:4159178‑M1/150‑1 (MQ=255) CCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCAt < 1:4082978‑M1/150‑1 (MQ=255) CCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCAt < 2:2290251‑M1/150‑1 (MQ=255) CCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCAt < 2:1264016‑M1/150‑1 (MQ=255) TCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCg < 2:6084321‑M1/150‑1 (MQ=255) CCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGc > 2:3702867‑M1/1‑150 (MQ=255) tACGGCAGCTGCACCGCCGGGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACACGCCGACTAGATAACCCACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCCCCACCATCTCGccc > 2:4479007/1‑150 (MQ=38) tACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCgg > 1:4563289/1‑49 (MQ=255) tACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGccc > 1:691389/1‑150 (MQ=255) ggAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATg > 1:403472/1‑150 (MQ=255) gAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGTTGGCCACCACCATCTCGCCCATgc > 1:5141963/1‑150 (MQ=255) gAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATgc > 2:2136044/1‑150 (MQ=255) cTGCACGGCCTTTTAATAGGGCGCCGACCCTGGGGGAGCGGGCTGGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCgcgt < 2:6384757/150‑1 (MQ=255) tGCACCGCCTTGTAATCCGGCGCCGACCCTGGGGGCGCGGGCTGCCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCgcgtg < 1:2087326/150‑1 (MQ=255) tGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCgcgtg > 1:1660974/1‑150 (MQ=255) tGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCgcgtg < 2:5787500/150‑1 (MQ=255) gCACCGCCTTGTAATCCGGCGCCGCCCCTGTGGGCGGGGGCTGGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCgcgtgc < 1:1222109/150‑1 (MQ=255) gCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCgcgtgc > 2:4680753/1‑150 (MQ=255) cGCCTTGTAATACGGCGCCGACCGTGTGGGAGCGGGCTGGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCgtgt < 2:1680701/150‑1 (MQ=255) ccTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCt > 1:2263702/1‑150 (MQ=255) ccTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCt > 2:1993168/1‑150 (MQ=255) cTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATccac > 2:5346108/1‑108 (MQ=255) cTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATccac < 1:5346108/108‑1 (MQ=255) cTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTg > 1:3815696/1‑150 (MQ=255) cTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTg > 2:851313/1‑150 (MQ=255) cTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATACGCGTGCGTGTCTg > 1:2665111/1‑150 (MQ=255) tAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACa < 2:1037650/150‑1 (MQ=255) tAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACa < 2:3381533/150‑1 (MQ=255) aaTACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGTTAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAg > 1:5948703/1‑150 (MQ=255) aTACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGt > 2:2656694/1‑150 (MQ=255) aTACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGt > 1:5529928/1‑150 (MQ=255) tACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGccgta > 1:1010527/1‑85 (MQ=255) aCGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGTgg > 2:2852007/1‑150 (MQ=255) ggCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCACACATATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGGGGCa > 2:6612330/1‑150 (MQ=255) cgcCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGa < 1:991358/56‑1 (MQ=255) cGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGTGGCACTGgc < 2:6468276/150‑1 (MQ=255) gACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGTGGCACTGgcg < 2:2514348/150‑1 (MQ=255) | GGCAGAGGTTGCGGGTGTGGCCGGTGCGGTTGAAGGGGGAGGCGGTGGAGCTGGCGGTGGCCTGATACCCCTTTGCTGCCTGTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGGAATCTGCACCGCCTTGTAATACGGCGCCGACCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAAGCCGACTAGATAACCAACCCCTGCGGCGTGCGCCCGGCAAACACATCCACCAGGCTGGCCACCACCATCTCGCCCATGCGCGTGCGTGTCTGTACAGTGGCACTGGCGC > NC_002947/1911587‑1911882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |