BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,133,224	A→T	5.7%	Q1201H (CAA→CAT)	PP_1887 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,133,224	0	A	T	5.7%	971.6 / 31.4	294	Q1201H (CAA→CAT)	PP_1887	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (137/138); new base T (9/8); total (147/147)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 296 total aligned reads displayed.

AAGCGCCCGTGGACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGC  >  NC_002947/2133076‑2133372

aaGCGCCCGTGGACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACaaa                                                                                                                                                     <  1:3227257/150‑1 (MQ=255)

   cgcCCGTGGACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGa                                                                                                                                                  <  2:2984538/150‑1 (MQ=255)

      ccGTGGACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGcc                                                                                                                                               <  1:4115120/150‑1 (MQ=255)

       cGTGGACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCg                                                                                                                                              <  1:2476784/150‑1 (MQ=255)

          ggACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGTGATCCGGCACAAATGAGCCGGAt                                                                                                                                           >  2:6566417/1‑150 (MQ=255)

               ccTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTc                                                                                                                                      >  2:77714/1‑150 (MQ=255)

                cTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTcc                                                                                                                                     <  1:4643775/150‑1 (MQ=255)

                      tCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGa                                                                                                                               <  2:3271224/150‑1 (MQ=255)

                       cAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGAt                                                                                                                              <  1:721035/150‑1 (MQ=255)

                        aaaCCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATg                                                                                                                             >  2:1431570/1‑150 (MQ=255)

                        aaaCCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATg                                                                                                                             >  2:6474907/1‑150 (MQ=255)

                        aaaCCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATg                                                                                                                             <  2:1356427/150‑1 (MQ=255)

                            cATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCt                                                                                                                         >  2:2257726/1‑150 (MQ=255)

                             aTTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTa                                                                                                                        >  1:5660156/1‑150 (MQ=255)

                              ttGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTAc                                                                                                                       >  1:6036840/1‑150 (MQ=255)

                                gCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTg                                                                                                                     <  2:2760009/150‑1 (MQ=255)

                                  cattcAGATATTCGGATTCGATGGCCTGGACAACATCCTCTCGGTGATCAGCTACAGAACGGACGGGTCTTGGAATCGGAGCTTGTACGAATTATAGAATAGCGATCCGGCACAAATGAGGAGGATCATTCCTCATGATGCGCTACTTga                                                                                                                   >  2:1029650/5‑150 (MQ=255)

                                       aGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCt                                                                                                              <  2:4144492/150‑1 (MQ=255)

                                       aGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCt                                                                                                              >  1:1871465/1‑150 (MQ=255)

                                         atatTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTAt                                                                                                            <  1:2257726/150‑1 (MQ=255)

                                           atTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCTCCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCTCCTGATGCGCTACTGGAGACCTATGa                                                                                                          <  2:505040/150‑1 (MQ=255)

                                           atTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGa                                                                                                          <  1:6083323/150‑1 (MQ=255)

                                            ttCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGAc                                                                                                         >  1:1828779/1‑150 (MQ=255)

                                            ttCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGAc                                                                                                         >  1:6246534/1‑150 (MQ=255)

                                            ttCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGAc                                                                                                         >  1:6736431/1‑150 (MQ=255)

                                              cGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGt                                                                                                       <  1:1310539/150‑1 (MQ=255)

                                                  ttCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGAt                                                                                                   >  2:2323955/1‑150 (MQ=255)

                                                  ttCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGAt                                                                                                   >  2:4127656/1‑150 (MQ=255)

                                                  ttCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGAt                                                                                                   >  1:4708472/1‑150 (MQ=255)

                                                    cGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCa                                                                                                 >  1:441228/1‑150 (MQ=255)

                                                      aTGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACg                                                                                               >  1:5349742/1‑150 (MQ=255)

                                                       tGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGa                                                                                              <  1:3964503/150‑1 (MQ=255)

                                                           cTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTAGATCACGACCTg                                                                                          >  1:3875167/1‑150 (MQ=255)

                                                             ggACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTgga                                                                                        >  2:36745/1‑150 (MQ=255)

                                                             ggACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTgga                                                                                        <  1:866607/150‑1 (MQ=255)

                                                              gACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTggag                                                                                       >  1:1486237/1‑150 (MQ=255)

                                                              gACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTggag                                                                                       >  1:2057367/1‑150 (MQ=255)

                                                              gACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTggag                                                                                       <  2:4668832/150‑1 (MQ=255)

                                                                 aacaTCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGGACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCAGTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGgaggag                                                                                    >  2:5447212/1‑150 (MQ=255)

                                                                   caTCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAgtt                                                                                  >  1:2831057/1‑150 (MQ=255)

                                                                   caTCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAgtt                                                                                  >  2:484528/1‑150 (MQ=255)

                                                                    aTCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGc                                                                                                                                   >  2:4522675/1‑100 (MQ=255)

                                                                    aTCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAgttg                                                                                 >  1:4177967/1‑150 (MQ=255)

                                                                     tCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAgttgt                                                                                >  1:3800041/1‑150 (MQ=255)

                                                                     tCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAgttgt                                                                                <  2:1643869/150‑1 (MQ=255)

                                                                        tctcGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCa                                                                             >  2:2514082/1‑150 (MQ=255)

                                                                        tctcGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCa                                                                             <  2:3066772/150‑1 (MQ=255)

                                                                        tctcGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCAGTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCa                                                                             >  2:6036035/1‑150 (MQ=255)

                                                                        tctcGGTGATCACCTACAGAAAGGACGGGTCGTGGCAGCGGACCGTGTACGAATTCAAGAATAGAGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCTCGACCTGGAGGAGTTGTTCa                                                                             >  2:1019170/1‑150 (MQ=255)

                                                                         ctcGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCaa                                                                            <  1:2967241/150‑1 (MQ=255)

                                                                         ctcGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCaa                                                                            <  2:4012293/150‑1 (MQ=255)

                                                                          tcGGTGATCGCCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTGCGAATTCAAGAATAGCGATCCGGCACACATGAGCCGGATCCTTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCGGGAGGAGTGGTTCAAg                                                                           >  2:6198078/1‑150 (MQ=255)

                                                                          tcGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAg                                                                           <  2:4781725/150‑1 (MQ=255)

                                                                             gTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATc                                                                        <  1:5891841/150‑1 (MQ=255)

                                                                                aTCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTc                                                                     <  2:3799975/150‑1 (MQ=255)

                                                                                aTCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTc                                                                     <  2:3617457/150‑1 (MQ=255)

                                                                                      tACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATAc                                                               >  2:1100321/1‑150 (MQ=255)

                                                                                         aGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGAt                                                            <  1:1618434/150‑1 (MQ=255)

                                                                                          gACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATc                                                           <  1:3627119/150‑1 (MQ=255)

                                                                                          caCCGGACGGGTCGTGGCAGCGGACCTTGTACGAACTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGATACTGGAGACCAATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATc                                                           <  1:1029650/149‑1 (MQ=255)

                                                                                             cGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTCCTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGc                                                        >  2:6781244/1‑150 (MQ=255)

                                                                                             cGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGc                                                        >  2:4961413/1‑150 (MQ=255)

                                                                                               gACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAg                                                      >  2:5287713/1‑150 (MQ=255)

                                                                                               gACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAg                                                      >  2:2681633/1‑150 (MQ=255)

                                                                                                  gggTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTg                                                   >  1:2744492/1‑150 (MQ=255)

                                                                                                    gTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGc                                                 <  2:5193945/150‑1 (MQ=255)

                                                                                                     tCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCt                                                >  1:517139/1‑150 (MQ=255)

                                                                                                     tCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCt                                                >  1:2534931/1‑150 (MQ=255)

                                                                                                         ggCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGc                                                                                                                                   <  1:3439883/63‑1 (MQ=255)

                                                                                                         ggCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGc                                                                                                                                   >  2:3439883/1‑63 (MQ=255)

                                                                                                           cAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGAt                                          <  1:1084223/150‑1 (MQ=255)

                                                                                                             gCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTCTCGAttt                                        >  1:5416919/1‑150 (MQ=255)

                                                                                                             gCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGAttt                                        <  1:6474907/150‑1 (MQ=255)

                                                                                                             gCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGAGCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTCTCGAttt                                        >  2:4405720/1‑150 (MQ=255)

                                                                                                                 aCCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCAt                                    <  2:3604494/150‑1 (MQ=255)

                                                                                                                    ttGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGAc                                                                                                                >  2:390005/1‑71 (MQ=255)

                                                                                                                    ttGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGAc                                                                                                                <  1:390005/71‑1 (MQ=255)

                                                                                                                        aCGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTacgacg                             >  1:4353180/1‑150 (MQ=255)

                                                                                                                         cGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACgg                            <  1:172819/150‑1 (MQ=255)

                                                                                                                          gAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGc                           >  2:3306420/1‑150 (MQ=255)

                                                                                                                          gAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGc                           >  2:5765355/1‑150 (MQ=255)

                                                                                                                             ttCAAGAATAGCGATCCGGCACACATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCTAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAAt                        <  1:314016/150‑1 (MQ=255)

                                                                                                                              tCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATg                       <  2:878894/150‑1 (MQ=255)

                                                                                                                              tCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATg                       >  1:1128009/1‑150 (MQ=255)

                                                                                                                              tCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATg                       >  2:5616852/1‑150 (MQ=255)

                                                                                                                               cAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATgg                      >  1:6215697/1‑150 (MQ=255)

                                                                                                                               cAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATgg                      >  2:6434783/1‑150 (MQ=255)

                                                                                                                                aaGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGc                     >  2:2822954/1‑150 (MQ=255)

                                                                                                                                 aGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCa                    >  1:6644568/1‑150 (MQ=255)

                                                                                                                                  gAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCaa                   >  1:5534421/1‑150 (MQ=255)

                                                                                                                                        tgATCCGGCTCATTTGTGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGAt             >  1:4809377/2‑150 (MQ=255)

                                                                                                                                        cGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGAt             <  2:1871465/150‑1 (MQ=255)

                                                                                                                                           tCCGGCTCATTTGTGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAg          >  2:1891173/1‑150 (MQ=255)

                                                                                                                                           tCCGGCTCATTTGTGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAg          >  2:6858612/1‑150 (MQ=255)

                                                                                                                                           tCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAg          >  2:1831673/1‑150 (MQ=255)

                                                                                                                                                cacaAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGtgatg     >  1:3939551/1‑150 (MQ=255)

                                                                                                                                                cacaAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGtgatg     <  2:6645574/150‑1 (MQ=255)

                                                                                                                                                 acaAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGtgatga    <  1:5269981/150‑1 (MQ=255)

                                                                                                                                                 acaAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGtgatga    <  1:5020719/150‑1 (MQ=255)

                                                                                                                                                   aaaTGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGc  >  2:2073368/1‑150 (MQ=255)

AAGCGCCCGTGGACCCCTCCGGTCAAACCATTGCCAGGCAGATATTCGGCTTCGATGGCCTGGACAACATCCTCTCGGTGATCACCTACAGACCGGACGGGTCGTGGCAGCGGACCTTGTACGAATTCAAGAATAGCGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGC  >  NC_002947/2133076‑2133372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`