Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,355,513 G→A 5.2% G910S (GGC→AGC) ‡ PP_2065 → multidrug RND transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,355,5130GA 5.2% 919.8 / 24.0 287G910S (GGC→AGC) ‡PP_2065multidrug RND transporter
Reads supporting (aligned to +/- strand):  ref base G (156/116);  new base A (9/6);  total (165/122)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 298 total aligned reads displayed.

TGGTGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGACTTTTGGC  >  NC_002947/2355364‑2355662
                                                                                                                                                     |                                                                                                                                                     
tGGTGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCg                                                                                                                                                       >  2:4111901/1‑150 (MQ=255)
tGGTGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCg                                                                                                                                                       >  2:6337088/1‑150 (MQ=255)
 ggTGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCgg                                                                                                                                                      <  2:2940590/150‑1 (MQ=255)
  gTGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGc                                                                                                                                                     <  1:1929858/150‑1 (MQ=255)
   tGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGcc                                                                                                                                                    <  2:1895589/150‑1 (MQ=255)
   tGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGcc                                                                                                                                                    <  1:4052993/150‑1 (MQ=255)
        gcggcgCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATc                                                                                                                                               <  2:2547355/150‑1 (MQ=255)
        gcggcgCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATc                                                                                                                                               >  1:5256743/1‑150 (MQ=255)
           gcgcAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCAGGCCGATCagc                                                                                                                                            <  1:2353794/150‑1 (MQ=255)
             gcAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCagcaa                                                                                                                                          >  1:6352357/1‑150 (MQ=255)
                 tACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCAc                                                                                                                                      >  1:1787294/1‑150 (MQ=255)
                 tACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCAc                                                                                                                                      <  1:20175/150‑1 (MQ=255)
                 tACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCAc                                                                                                                                      >  1:209468/1‑150 (MQ=255)
                 tACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCAc                                                                                                                                      <  1:5928041/150‑1 (MQ=255)
                 tACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCAc                                                                                                                                      >  1:4003783/1‑150 (MQ=255)
                  aCGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCAGGCCGATCagcgtcacca                                                                                                                                     <  2:5692750/150‑8 (MQ=255)
                   cGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACgg                                                                                                                                    <  1:5700987/150‑1 (MQ=255)
                    gAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGt                                                                                                                                   >  2:4204428/1‑150 (MQ=255)
                    gAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGt                                                                                                                                   >  1:1346165/1‑150 (MQ=255)
                     aaaGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTa                                                                                                                                  >  1:3457164/1‑150 (MQ=255)
                     aaaGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTa                                                                                                                                  <  1:3595926/150‑1 (MQ=255)
                       aGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCTCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAATCACGGTATc                                                                                                                                <  2:705230/150‑1 (MQ=255)
                       aGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATc                                                                                                                                >  2:3679286/1‑150 (MQ=255)
                       aGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATc                                                                                                                                <  2:4545545/150‑1 (MQ=255)
                        gCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATcc                                                                                                                               <  1:3064160/150‑1 (MQ=255)
                        gCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATcc                                                                                                                               >  2:591825/1‑150 (MQ=255)
                        gCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATcc                                                                                                                               <  1:971660/150‑1 (MQ=255)
                         ccTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCt                                                                                                                              <  2:6308145/150‑1 (MQ=255)
                           tGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGa                                                                                                                            >  2:3404560/1‑150 (MQ=255)
                           tGGTCGACCCCCTGATCATTCCGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGa                                                                                                                            <  1:1282446/150‑1 (MQ=255)
                             gTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGAtg                                                                                                                          >  2:3160630/1‑150 (MQ=255)
                                     ccTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGtt                                                                                                                  >  2:6535660/1‑150 (MQ=255)
                                      cTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGTCTGTGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGTTATCCTGATTGTGGCGTTc                                                                                                                 <  2:433685/150‑1 (MQ=255)
                                        gATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGc                                                                                                               <  1:6602391/150‑1 (MQ=255)
                                           cATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCaa                                                                                                            >  2:5760503/1‑150 (MQ=255)
                                             ttCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACg                                                                                                          >  2:798891/1‑150 (MQ=255)
                                                tGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACgaga                                                                                                       <  1:3079242/150‑1 (MQ=255)
                                                 ggTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGAt                                                                                                      >  1:3134421/1‑150 (MQ=255)
                                                   tGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTc                                                                                                    <  2:5099519/150‑1 (MQ=255)
                                                     aCCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAg                                                                                                  <  1:240592/150‑1 (MQ=255)
                                                           ccGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTAATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTgcgc                                                                                            <  2:3060848/150‑1 (MQ=255)
                                                            cGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGcgcg                                                                                           >  1:3695340/1‑150 (MQ=255)
                                                             gCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCTGGTGCGCGa                                                                                          >  2:5310008/1‑150 (MQ=255)
                                                               tGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACa                                                                                        >  1:2303910/1‑150 (MQ=255)
                                                               tGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACa                                                                                        >  1:66817/1‑150 (MQ=255)
                                                                  cGATCTGCGGTGCGCTGCTGCCGCTCGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGTTCGGCCTGATCAGCAAGCACGGTATCCTGTTGGTGGCGTTCGCCAACGAGATTCTGGTGCGCGGCAAcc                                                                                     >  1:5966597/1‑150 (MQ=255)
                                                                   gATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGTTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCt                                                                                    >  2:6419304/1‑150 (MQ=255)
                                                                              cgcTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGtgctg                                                                         >  2:2479107/1‑150 (MQ=255)
                                                                                ctgctgCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTgcc                                                                       >  2:5525922/1‑150 (MQ=255)
                                                                                 tgctgcCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTgccg                                                                      >  2:6714958/1‑150 (MQ=255)
                                                                                 tgctgcCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTgccg                                                                      >  1:5154832/1‑150 (MQ=255)
                                                                                  gctgcCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTgccgc                                                                     >  2:4668324/1‑150 (MQ=255)
                                                                                    tgcCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCa                                                                   >  1:2467179/1‑150 (MQ=255)
                                                                                     gcCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCAt                                                                  >  1:600937/1‑150 (MQ=255)
                                                                                     gcCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGAACAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGAGTCAGGTGCGCGACAACCTCGATCGTGCTGACGCAAt                                                                  >  2:2149454/1‑150 (MQ=255)
                                                                                      ccGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCAtt                                                                 <  1:5197157/150‑1 (MQ=255)
                                                                                      ccGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCAtt                                                                 >  1:5441805/1‑150 (MQ=255)
                                                                                       cgctggcgctggGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTg                                                                >  2:5045789/1‑150 (MQ=255)
                                                                                          tggcgctggGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTc                                                             <  2:2872834/150‑1 (MQ=255)
                                                                                           ggcgctggGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGAt                                                                                                                                                <  2:1186686/66‑1 (MQ=255)
                                                                                           ggcgctggGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGAt                                                                                                                                                >  1:1186686/1‑66 (MQ=255)
                                                                                             cgctggGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTg                                                          <  1:4111901/150‑1 (MQ=255)
                                                                                             cgctggGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTg                                                          <  1:694215/150‑1 (MQ=255)
                                                                                               ctgggctgggCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTgcg                                                        >  2:1559362/1‑150 (MQ=255)
                                                                                                 gggctgggcCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTgcggc                                                      <  1:498923/150‑1 (MQ=255)
                                                                                                     tgggcCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCaa                                                  >  2:2170501/1‑150 (MQ=255)
                                                                                                       ggcCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAAt                                                >  1:6250462/1‑150 (MQ=255)
                                                                                                         ccACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATAc                                              >  2:1411148/1‑150 (MQ=255)
                                                                                                             gCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCtt                                          >  2:6778812/1‑150 (MQ=255)
                                                                                                               tGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGc                                        >  2:4431959/1‑150 (MQ=255)
                                                                                                               tGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGc                                        <  2:6804061/150‑1 (MQ=255)
                                                                                                                    aTCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCa                                   <  2:1059373/150‑1 (MQ=255)
                                                                                                                    aTCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCa                                   >  1:6467282/1‑150 (MQ=255)
                                                                                                                       tACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTg                                >  1:1080925/1‑150 (MQ=255)
                                                                                                                          acacaGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtg                             >  2:5567719/1‑150 (MQ=255)
                                                                                                                           cacaGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtga                            >  2:1855599/1‑150 (MQ=255)
                                                                                                                            acaGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtgat                           >  2:2955226/1‑150 (MQ=255)
                                                                                                                            acaGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtgat                           <  1:5310008/150‑1 (MQ=255)
                                                                                                                             caGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtgatg                          <  1:4279568/150‑1 (MQ=255)
                                                                                                                              aGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtgatga                         >  2:3504152/1‑150 (MQ=255)
                                                                                                                              aGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCtgatga                         <  2:1356361/150‑1 (MQ=255)
                                                                                                                               gATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGAc                        <  2:2094934/150‑1 (MQ=255)
                                                                                                                                    gCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCAcgg                   >  1:1601971/1‑150 (MQ=255)
                                                                                                                                       tGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCAcggcgg                >  2:2662878/1‑150 (MQ=255)
                                                                                                                                        ggTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACggcggc               <  2:4003783/150‑1 (MQ=255)
                                                                                                                                           gACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGAt            >  2:2386025/1‑150 (MQ=255)
                                                                                                                                            ttgCTGATCAGGCCGATCAGCGAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATg           >  2:885512/3‑150 (MQ=255)
                                                                                                                                            ttgCTGATCAGGCCGATCAGCGAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATg           >  2:1313589/3‑150 (MQ=255)
                                                                                                                                            ttgCTGATCAGGCCGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATg           >  2:6112028/3‑150 (MQ=255)
                                                                                                                                              gCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGAc         <  2:6036611/150‑1 (MQ=255)
                                                                                                                                              gCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGAc         >  1:2985746/1‑150 (MQ=255)
                                                                                                                                              gCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGAc         >  1:1004166/1‑150 (MQ=255)
                                                                                                                                              gCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCAATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGAc         >  1:2771526/1‑150 (MQ=255)
                                                                                                                                              gCTGATCGGCCTGATCAGAAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGATATTCAGGTGCGCGACAACCTCGATCGTGATGCCGCCATTGTTCGTGCGGCGCAAATAAGCTTGCGGCCAGTGCTGATGACCACGTCGGCGATGAc         >  1:1471458/1‑150 (MQ=255)
                                                                                                                                              gCTGATCAGGCCGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGAc         >  1:331317/1‑150 (MQ=255)
                                                                                                                                                tGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGCTGACtg       >  2:1738823/1‑149 (MQ=255)
                                                                                                                                                tGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGACtt       >  1:804423/1‑150 (MQ=255)
                                                                                                                                                tGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGACtt       >  1:3880404/1‑150 (MQ=255)
                                                                                                                                                   tCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGACTTTTg    <  1:2662878/150‑1 (MQ=255)
                                                                                                                                                     ggCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGACTTTTGGc  <  1:4791729/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGGTGCTGGCGGCGCAGTACGAAAGCCTGGTCGACCCCCTGATCATTCTGGTGACCGTGCCGCTGTCGATCTGCGGTGCGCTGCTGCCGCTGGCGCTGGGCTGGGCCACGCTGAACATCTACACACAGATTGGCCTGGTGACGCTGATCGGCCTGATCAGCAAGCACGGTATCCTGATGGTGGCGTTCGCCAACGAGATTCAGGTGCGCGACAACCTCGATCGTGCTGCCGCCATTGTTCGTGCGGCGCAAATACGCTTGCGGCCAGTGCTGATGACCACGGCGGCGATGACTTTTGGC  >  NC_002947/2355364‑2355662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: