| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,869 | A→T | 12.4% | intergenic (+128/‑53) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,869 | 0 | A | T | 12.4% | 424.1 / 11.2 | 182 | intergenic (+128/‑53) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (85/64); new base T (4/20); total (92/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
CCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA > NC_002947/2461720‑2462015 | cccGCCAGGGTTTCCACGCTGTTTCGCTTGTTAGGCAATGAAAAAACGGGAACCTTCTGGTGCA‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTATTATCGCTGCCCCTGTa < 2:6347735/150‑1 (MQ=38)cccGCCAGCGTTTCCACGCTGATTCGCTTGTAATGCTATTAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGTCCCTTTCTCTGGTAAACCCGCTCCTACAGGATTATCGCTGCCCATGTa < 2:5528658/150‑1 (MQ=255)cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 2:3856575/150‑1 (MQ=255)cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:3154049/150‑1 (MQ=255) ccGCCAGCGTTTCCACGCGGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCGACAGGATTATCGCTGCCCCTGGAg > 2:6494793/1‑150 (MQ=255) gCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGa < 1:510410/150‑1 (MQ=255) gCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGa < 2:511586/150‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg < 1:3701988/150‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg < 1:3085339/150‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg < 2:827315/150‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg < 2:116349/150‑1 (MQ=255) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCGACAGGATTATCGCAGCCCCAGTAGGAGCGGGt > 1:1530757/1‑150 (MQ=255) ttCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGttt < 1:2903136/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTAc < 2:2208632/150‑1 (MQ=25) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 1:5555303/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:2976054/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTAAAGGATTATCGCTGCCCCTGTAGGATCGGGTTTAcc > 2:445818/1‑150 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAccc < 1:974285/150‑1 (MQ=255) gATTCGGTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATGGCTGCCCCTGTAGGAGGGGGTTTACCCGCGaa < 2:15980/150‑1 (MQ=39) gATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCTCCTACAGGGTTATCGCGTCCCCTGTAGGAGCGGGTTTTCCCGCGac > 1:1546297/1‑149 (MQ=38) ttCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga < 2:6735295/150‑1 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGACTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGAAGATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAagc > 2:4323793/1‑149 (MQ=255) cgcgggTACGGCAAGGCAAAAACGGGACCCTGCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCGTTCGCGGGTAAACCCGCTCCTCCAGGTTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAgg < 2:4378683/145‑1 (MQ=37) cGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTTTTCTGATTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAgg < 2:5943596/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTGCTAAAGGATTATGGCTGCCCCTGTATGAGCGGGTTTTACCGCGTAGAggg > 1:1606819/1‑149 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGGAGAGGc > 2:1773831/1‑150 (MQ=255) cTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGcc > 2:1677086/1‑150 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACGTTCGGGTCCC‑‑CTTTTTTTTTTATTCTCAATGTGTGTTGTCTGTGCCGGCCCTTTCGCGGGTAACCCCGCCCCTCCCGGATTAGCGCGGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCa < 2:1717080/150‑1 (MQ=37) gTATGGCAATGAAAAAACGGGAACCTTCGGGTTCCGTTTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTCCCGGATTATCGCTGCCCGTGTAGGAGCGGTTTTACCCGCGAAGAGGCCa < 2:2593811/150‑1 (MQ=37) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAACCCGCACCGACAGGCTTATAGCTGCCCCGGTAGGGGCGGGGTTTACCGCGACGAgggccccc > 1:349352/1‑144 (MQ=255) gCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATAGCTGCCCCGGTAGGGGCGGGTTTACCCGCGAAGGGGCCAGCACCgg > 2:1444083/1‑150 (MQ=255) taaaaaaaaaCGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCa > 2:5067828/5‑150 (MQ=255) aaTGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGAAACCCGCGCCGACAGGCTTATCGCTGCCCCAGTCGGAGCGGGTTTACCCGCGCAGGGGCCAGCACCCGcc > 2:169900/1‑149 (MQ=255) tGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTTAACCGCGCCAACACGGGGATCTCTGCCCCCGGAGGAGGGGGGTTTACCGCGCAGGGGGCCGCCCCCGCAAc > 1:4630405/1‑150 (MQ=255) aaaCGGGACCCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGACTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga < 2:5689135/150‑1 (MQ=255) aaaCGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATAGCTGCCCCGGTGGGGGCGGGTTTACCCGCGAAGGGGCCAGCACCGGCAACCgaga > 1:4682932/1‑150 (MQ=39) cGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCACCCGCGCAAc > 2:5955935/1‑150 (MQ=255) cGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATAGCTGCCCCGGTATGAGCGGGTTTACCCGCGAATATGCCAGCACCCGCAACCGAGAAAc > 2:810291/1‑150 (MQ=39) gAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGAGTATCGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCGGCAACCGAGAAAccca > 1:4405104/1‑149 (MQ=255) acccTTCGGGTTCC‑‑CTTTTTTTTTTATTCTGAATGTGGGTTGACAGGGCCGGCCCTTTCGCGGGTAACCCCGCTCCTACAGGTTTATCGCGGCCCCTGTAGGCGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 2:61199/148‑1 (MQ=38) aaCCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTAAAGGATTAACGCTGCCCCAGTATGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa > 2:2961303/1‑150 (MQ=255) ttCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGCGAAACCCTACtgt > 2:4877022/1‑150 (MQ=255) c‑‑cGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCAGCGAAAGGCTTTTAGCAGCCCCGGGAGGAGCGGGTTTACCCGCGCAGAGGCCAGCACCCGCAACCGAGTAACCCGACTGGGCGcacacc > 1:2109729/1‑148 (MQ=255) c‑‑cGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCACCTAAATGAATATCGCTGCCCCAGTATGAGCGGGTTTACACGCGGAGAGGCCAGCCACGGCAACCCACAAACCCTACAGTGCGCACAGc > 1:6206142/1‑150 (MQ=255) cGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCATCCCCGGTAGGAGAGGGTTTAACCGCGAAGAGGCCAGCACCGGCACCCCAGAAACCCTACTGTGCGCACAGcc > 2:399866/1‑150 (MQ=38) cGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTAAAGGATTATAGCTTCCCCTGTATGATCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAAACGAGAAACCCAACAGTGCGCACAGcc > 2:5913917/1‑150 (MQ=38) tttttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGcccg > 2:2806346/1‑149 (MQ=255) ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTACAAAAGGATTAAAGCAGACCCCCTAGTAGCGCGTTTAAACCCGAAGAGGCCACCACCGGCAACCCAGAAACCCAACAGTGCGCACAGCCCAACTGTTc > 1:6095029/1‑150 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCCGCAACCGAGAAACCCTACTGTGCGCACAGCCCGACAGGTCAtt > 2:4312471/1‑150 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGAAACCCCCGCCAACAGGATTATCCCTGCCCCAGGAGGAGCGGGTTTAACCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCGACAGTGCGCACAGCCCTCCTGGTGAtt > 1:3334518/1‑150 (MQ=255) cTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCAGCCCCTGTAGGAGCGGGTTTACCCGCGCAGAGGCCCGCACCGGCCACCGAGCAACCCAACAGTGCGCACAGCCCGACGGTTCAtaat > 2:4111348/1‑147 (MQ=37) tcaaTGTTTGTTCTCAGTGCCGGCCCTTTCGCGTTTAAACCCGCTCAAACAGTATTATCCCTCCCCCTTTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctg < 1:467089/148‑1 (MQ=255) tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCGACAGGATTATCCCTGCCCCGGTAGGAGCGGGTTTACCCCCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACGGTGCGCACAGCCCAAAAGTTCATTctg > 2:935479/1‑150 (MQ=37) tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCGCCGACAGGCGTATCGCTGCCCCAGGAGGAGCGGGTTTACCCCCCAAGAGGCCCCCACCCGCAACCCACAAACCCCACGGTGCGCCCAGCCCAACAGTTAATTatg > 1:6667579/1‑150 (MQ=255) gAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc > 2:3885615/1‑150 (MQ=255) tgtgtTGTCTGTGCCGGCCCTGCCGCGGTTAAACCCGCGCCTACCGGTTTAGCGGTGCCCCTGTGGGTGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 1:5347386/150‑1 (MQ=255) tgtgtTGTCAGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCAAAGCCCTACTGTTCATTCTGCTGCTa < 2:2298106/150‑1 (MQ=255) tCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTAACCGCGCAGAGGCCAGCACCGGCAACCGAGGAACCCAACTGTGCGCACAGCCCAACAGTTCATTCTGCTGCTACTCACCg > 1:6222446/1‑150 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCACCCGAGAAACCCTACTGTGCGCACAGCCCTACGGTTCATTCTGCTGCTACTCACCGCCt > 2:5498711/1‑150 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:5343530/150‑1 (MQ=255) ttCGCGGGTCACCCCCCTCCTCCCGCATTATCGCTGCCCCTGTAGGAGCGGGTTTCCCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 1:6606487/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTg > 1:5651529/1‑111 (MQ=255) gcgGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGcccc > 1:5715364/1‑150 (MQ=255) aaaCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg < 2:1916253/150‑1 (MQ=255) aaCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTgg < 1:3904447/150‑1 (MQ=255) aCCCGCTCCTACCGGATTATCGCTGCCCCTGTTGGTGGGGGTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:4862771/150‑1 (MQ=255) aCCCGCTCCTACAGGTTTATGGCTGCCCCTTTTGTAGGGTTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:839242/150‑1 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 1:64369/1‑150 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 2:4874447/150‑1 (MQ=255) cccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCAACTCACCGCCTGCAACCAAGGCCCCACCCTGGAg > 2:3566178/1‑150 (MQ=25) cccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAg > 1:6024264/1‑150 (MQ=255) ccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:4979491/1‑150 (MQ=37) gCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgcgc < 2:3856820/150‑1 (MQ=255) ccTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTg > 1:4441718/1‑150 (MQ=255) ctcccggATTAGCGCGGCCCGGGTCGGCGCGGGTTCCCCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:169900/145‑1 (MQ=255) acactggATTATCGCGGCCCCTTTTGTCGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:315983/145‑1 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:1068879/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAggg > 2:1163278/1‑150 (MQ=255) aCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 1:128605/1‑150 (MQ=255) cAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtg < 1:1163278/150‑1 (MQ=255) gttttAGCGCTGCCCCTGTTGGAGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtggt < 1:2374831/147‑1 (MQ=255) gATTATCGCTGCCCCTGTTGGAGCGGGTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgggg < 2:4630405/150‑3 (MQ=255) gATTACCGCGCCCCCGGTTGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgggg < 1:4181270/150‑3 (MQ=38) aTTACCGCTGCCCCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtggggc < 1:3568810/150‑4 (MQ=39) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg < 1:4555046/150‑1 (MQ=255) aTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCACCCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCACGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc < 2:5401253/150‑1 (MQ=255) aTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc > 1:685610/1‑150 (MQ=255) aTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtggggcctt < 2:4144551/150‑7 (MQ=39) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 1:4726381/1‑150 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTTATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCAt < 2:4682932/150‑1 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCAt > 1:439373/1‑150 (MQ=255) cTGCCCCTGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATg > 1:937316/1‑150 (MQ=255) gCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATggg < 2:6666838/150‑1 (MQ=255) gCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATggg < 2:685610/150‑1 (MQ=255) ccTGTAGGTGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcag < 2:4418302/150‑1 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcag > 1:4906196/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcag < 1:4423253/150‑1 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcag > 1:4906201/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcag > 1:4088330/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcagc < 2:3227375/150‑1 (MQ=255) | CCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCC‑‑CGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA > NC_002947/2461720‑2462015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |