Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,545,803 T→A 7.2% intergenic (+24/+25) PP_2232 → / ← PP_2233 XRE family transcriptional regulator/isochorismatase family hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,545,8030TA 7.2% 768.3 / 34.7 235intergenic (+24/+25)PP_2232/PP_2233XRE family transcriptional regulator/isochorismatase family hydrolase
Reads supporting (aligned to +/- strand):  ref base T (112/106);  new base A (7/10);  total (119/116)
Fisher's exact test for biased strand distribution p-value = 4.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 246 total aligned reads displayed.

ATCATCGAAGAGGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAGGGTCG  >  NC_002947/2545654‑2545952
                                                                                                                                                      |                                                                                                                                                     
   atcGAAGAGGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCa                                                                                                                                                    >  1:5466287/1‑150 (MQ=255)
   atcGAAGAGGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCa                                                                                                                                                    <  1:3346456/150‑1 (MQ=255)
     cGAAGAGGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGc                                                                                                                                                  <  2:3433113/150‑1 (MQ=255)
       aaGAGGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGccc                                                                                                                                                >  1:5616732/1‑150 (MQ=255)
         gagGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCa                                                                                                                                              <  1:4809863/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCaaa                                                                                                                                            <  1:4738338/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCaaa                                                                                                                                            <  1:5395983/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCaaa                                                                                                                                            <  1:6553163/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCaaa                                                                                                                                            <  2:6615691/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCACAGCAGCCCCaaa                                                                                                                                            <  1:6375082/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCACAGCAGCCCCaaa                                                                                                                                            <  1:5293742/150‑1 (MQ=255)
           ggTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCACAGCAGCCCCaaa                                                                                                                                            <  1:3928973/150‑1 (MQ=255)
            gTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAg                                                                                                                                           <  1:5872671/150‑1 (MQ=255)
                   aTCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCaa                                                                                                                                    <  2:3075305/150‑1 (MQ=255)
                    tCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAg                                                                                                                                   <  2:1721832/150‑1 (MQ=255)
                      gCTTGCAGGTGGGGCAGTTCCATGTGCTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGcc                                                                                                                                 <  2:2714333/150‑1 (MQ=255)
                        ttGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGa                                                                                                                               >  1:2574441/1‑150 (MQ=255)
                        ttGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGa                                                                                                                               >  1:5844916/1‑150 (MQ=255)
                        ttGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGa                                                                                                                               <  1:1263554/150‑1 (MQ=255)
                            aGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAg                                                                                                                           >  1:1382405/1‑150 (MQ=255)
                             ggTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGc                                                                                                                          >  1:524062/1‑150 (MQ=255)
                              gTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCt                                                                                                                         >  2:5468876/1‑150 (MQ=255)
                                 gggCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCtttt                                                                                                                      <  2:5705789/150‑1 (MQ=255)
                                   gCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTca                                                                                                                    <  1:4874942/150‑1 (MQ=255)
                                    cAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTcag                                                                                                                   <  2:5170760/150‑1 (MQ=255)
                                       ttCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTcagcag                                                                                                                >  2:3783691/1‑150 (MQ=255)
                                       ttCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTcagcag                                                                                                                >  2:4656463/1‑150 (MQ=255)
                                       gtCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTcagcag                                                                                                                >  2:2159565/2‑150 (MQ=255)
                                         ccATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACCTTTGGGGCTGCACAGCAGCCCCaaa                                                                                                                                            <  1:2534392/121‑1 (MQ=39)
                                          cATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCCGAGGTCTCAAGCCGAGCAGCTTTTCAGCAGCtc                                                                                                             >  1:6718743/1‑150 (MQ=255)
                                            tgtgTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCtcgt                                                                                                           <  1:33692/150‑1 (MQ=255)
                                                 tCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTc                                                                                                      <  2:1421503/150‑1 (MQ=255)
                                                   cccAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCtt                                                                                                    >  1:2845682/1‑150 (MQ=255)
                                                   cccAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCtt                                                                                                    >  2:4394305/1‑150 (MQ=255)
                                                     cAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTca                                                                                                  >  1:5662891/1‑150 (MQ=255)
                                                     cAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTca                                                                                                  <  2:3761952/150‑1 (MQ=255)
                                                          aCTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACcaca                                                                                             >  1:6635271/1‑150 (MQ=255)
                                                            ttacGGTAGGCATACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAtt                                                                                           >  1:5006784/4‑150 (MQ=255)
                                                            tGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGTGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAtt                                                                                           >  1:1818408/1‑150 (MQ=255)
                                                            tGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCACAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAtt                                                                                           >  2:4199786/1‑150 (MQ=255)
                                                            tGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAtt                                                                                           >  2:4989496/1‑150 (MQ=255)
                                                            tGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAtt                                                                                           >  2:3466643/1‑150 (MQ=255)
                                                                ggTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCa                                                                                       <  1:4639042/150‑1 (MQ=255)
                                                                ggTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAGTGGCa                                                                                       >  2:6523922/1‑150 (MQ=255)
                                                                 gTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCAt                                                                                      <  1:5023139/150‑1 (MQ=255)
                                                                 gTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCAt                                                                                      >  2:6703372/1‑150 (MQ=255)
                                                                   aTGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAg                                                                                    <  2:2569183/150‑1 (MQ=255)
                                                                     gCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGc                                                                                  >  2:489414/1‑150 (MQ=255)
                                                                        tACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCaaa                                                                               >  1:4166377/1‑150 (MQ=255)
                                                                        tACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAGTGGCATAGGCaaa                                                                               >  2:245811/1‑150 (MQ=255)
                                                                                cGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAaacgccaacg                                                                       <  2:1237410/150‑1 (MQ=255)
                                                                                    ggCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAAcgccgc                                                                   <  1:1050856/150‑1 (MQ=255)
                                                                                      cGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCa                                                                 <  1:745695/150‑1 (MQ=255)
                                                                                       gtggtgGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGt                                                                                                       >  2:3863205/1‑111 (MQ=255)
                                                                                       gtggtgGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGt                                                                                                       <  1:3863205/111‑1 (MQ=255)
                                                                                        tggtggCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATc                                                               <  1:890229/150‑1 (MQ=255)
                                                                                             gCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGa                                                          <  2:417599/150‑1 (MQ=255)
                                                                                             gCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGa                                                          >  1:1828138/1‑150 (MQ=255)
                                                                                              cTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGaa                                                         <  2:6070790/150‑1 (MQ=255)
                                                                                               tGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAAt                                                        <  1:3696471/150‑1 (MQ=255)
                                                                                                 ttCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCa                                                      >  1:6235991/1‑150 (MQ=255)
                                                                                                  tCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCAt                                                     <  2:6243351/150‑1 (MQ=255)
                                                                                                  tCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCAt                                                     >  1:2353052/1‑150 (MQ=255)
                                                                                                  tCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCAt                                                     <  2:2930114/150‑1 (MQ=255)
                                                                                                     gTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGACTCATGca                                                  >  2:4111089/1‑150 (MQ=255)
                                                                                                     gTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATgat                                                  >  2:1166606/1‑148 (MQ=255)
                                                                                                          tgCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGa                                             <  2:396/150‑1 (MQ=255)
                                                                                                          tgCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGa                                             <  2:756458/150‑1 (MQ=255)
                                                                                                           gcgcAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGGTCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACCTGAg                                            >  1:4349112/1‑150 (MQ=255)
                                                                                                           gcgcAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAATGCCAACGCCGCCATCGCCGAATCATGCACATGAg                                            >  1:6004547/1‑150 (MQ=255)
                                                                                                                aTGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAgccgcc                                       >  2:3114737/1‑150 (MQ=255)
                                                                                                                   tgGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGc                                    >  2:1600755/1‑150 (MQ=255)
                                                                                                                    ggCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCa                                   <  2:5789199/150‑1 (MQ=255)
                                                                                                                    ggCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCa                                   <  1:6313071/150‑1 (MQ=255)
                                                                                                                     gCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGGCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCCTCGCCGAATCATGCACATGAGCCGCCGGCAc                                  >  1:6137960/1‑150 (MQ=255)
                                                                                                                       gATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCt                                >  1:3044528/1‑150 (MQ=255)
                                                                                                                         tttGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCAGc                              >  1:6474264/1‑150 (MQ=255)
                                                                                                                            gAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTg                           <  1:4599234/150‑1 (MQ=255)
                                                                                                                              gCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGcc                         <  2:3635622/150‑1 (MQ=255)
                                                                                                                                 tGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTc                      <  2:5739921/150‑1 (MQ=255)
                                                                                                                                   cAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGa                    >  1:1540306/1‑150 (MQ=255)
                                                                                                                                    aGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGaa                   <  2:5421289/150‑1 (MQ=255)
                                                                                                                                     gACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAAc                  <  2:5616732/150‑1 (MQ=255)
                                                                                                                                      aCTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACg                 >  2:2929582/1‑150 (MQ=255)
                                                                                                                                        cTTTGGGGCTGCACAGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGc                >  1:5558901/1‑150 (MQ=255)
                                                                                                                                         tttGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACAtt                                                                                           <  2:1911003/74‑1 (MQ=255)
                                                                                                                                         tttGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGcc               >  1:1159878/1‑150 (MQ=255)
                                                                                                                                         tttGGGGCTGCACAGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGcc               >  1:3796808/1‑150 (MQ=255)
                                                                                                                                         tttGGGGCTGCACAGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGcc               >  2:6204137/1‑150 (MQ=255)
                                                                                                                                          ttGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCa              >  2:5972219/1‑150 (MQ=255)
                                                                                                                                              ggCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTgg          >  1:877701/1‑150 (MQ=255)
                                                                                                                                               gctgctGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGc         >  1:5972271/1‑150 (MQ=255)
                                                                                                                                                ctgctgTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCa        <  1:5740456/150‑1 (MQ=255)
                                                                                                                                                 tgctgTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAg       >  1:6821409/1‑150 (MQ=255)
                                                                                                                                                 tgctgTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAg       <  1:192878/150‑1 (MQ=255)
                                                                                                                                                  gctgTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATGGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAgg      <  1:6350311/150‑1 (MQ=255)
                                                                                                                                                    tgtgCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAGGGt    >  1:3429039/1‑150 (MQ=255)
                                                                                                                                                     gtgCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAGGGTc   <  2:4826160/150‑1 (MQ=255)
                                                                                                                                                     gtgCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAGGGTc   <  1:6045842/150‑1 (MQ=255)
                                                                                                                                                      tgCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAGGGTcg  >  2:2107717/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
ATCATCGAAGAGGTCGAGCATCGCTTGCAGGTGGGGCAGTTCCATGTGTTCCCCAGTAACTGCCGGTATGCCTACCGTAACGATGGCGTGGTGGCTGTTCGGTTTGTGCGCAATGTGGCGATTTGAGCCTGCAGACTTTGGGGCTGCTGTGCAGCCCCAAAGGTCTCAAGCCGATCAGCTTTTCAGCAGCTCGTCGGTCTTCACCACATTGGCATAGGCAAACGCCAACGCCGCCATCGCCGAATCATGCACATGAGCCGCCGGCACCTGCTTGCCGTCGAACGCCAGTGGCAGGGTCG  >  NC_002947/2545654‑2545952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: