| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,669,011 | T→G | 8.0% | intergenic (+44/‑119) | prpC → / → acnA‑II | methylcitrate synthase/aconitate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,669,011 | 0 | T | G | 8.0% | 459.0 / 5.1 | 180 | intergenic (+44/‑119) | prpC/acnA‑II | methylcitrate synthase/aconitate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (48/110); new base G (11/9); total (60/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.17e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
GGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCA > NC_002947/2668862‑2669159 | ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGt < 2:46765/150‑1 (MQ=255)ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGt < 1:97388/150‑1 (MQ=255) gcggcgCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTg < 2:2722172/150‑1 (MQ=255) ggcgCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGcc > 2:1796998/1‑150 (MQ=255) cgcACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCcg > 1:513998/1‑150 (MQ=255) gcACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCcgc < 2:4449926/150‑1 (MQ=255) cACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCcgcg < 2:4353469/150‑1 (MQ=255) tCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATg < 1:4608999/150‑1 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCa > 2:5863799/1‑150 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAAAGCa > 2:5031636/1‑150 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGGGGCCGCGGATgaa > 1:3011749/1‑148 (MQ=255) gAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGCATGCAccc > 1:5631876/1‑150 (MQ=255) gcagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCgg < 2:6748239/150‑1 (MQ=255) gcagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGGGCCCGCGAAAGCACCCgg > 2:2358745/1‑150 (MQ=255) cagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGGGGGCCCGCGGATGCGCCCGGc > 1:1634494/1‑150 (MQ=255) cagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGc < 2:2801710/150‑1 (MQ=255) agcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGcc < 2:1076693/150‑1 (MQ=255) agcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGcc < 2:1693402/150‑1 (MQ=255) cgcgcCATCAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCTGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt < 1:837049/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt < 2:4991606/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt < 1:5281623/150‑1 (MQ=255) gcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTg < 2:4110024/150‑1 (MQ=255) cgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGGTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGCGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGt < 1:4628999/150‑1 (MQ=255) gcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGGGGGGCCGCGCCGGCCCCCGGccggggg > 1:1807984/1‑145 (MQ=255) caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGGCTGCACCCCGCCGTGTGAc > 2:914035/1‑150 (MQ=255) caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGGGCCCGCGAGTGCACCCGGCCGTGTGAc > 1:3915759/1‑150 (MQ=255) acaacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCa < 2:4448038/150‑1 (MQ=255) aacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACt < 1:4671417/150‑1 (MQ=255) aacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCGTGGAACCACt > 2:4545833/1‑150 (MQ=255) acCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtg < 2:1672046/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt < 2:2517182/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt < 2:900315/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt < 1:132732/150‑1 (MQ=255) gCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCAATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGc < 2:4816350/150‑1 (MQ=255) catcatCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGGTGCCGCGAAAGCAACCCGCCCTGTAACCACagtgta > 2:1721149/1‑148 (MQ=255) tcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgc < 2:1095495/150‑1 (MQ=255) ccGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgct < 1:45304/150‑1 (MQ=255) ccGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgct < 1:3982846/150‑1 (MQ=255) gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa < 2:2276941/150‑1 (MQ=255) gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACGGTGCACCAGCGGa > 2:6661414/1‑150 (MQ=255) gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTGTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa < 2:5770836/150‑1 (MQ=255) cccGAGCGCCGTGTATGTCGGCGTCGTACAGCGACAGTTCGTGCCGATGTAGCAGCGCTGAATAGCTATAGATAGGCAACCCGTTTGCC‑TTGTGGGAGCGGGCGTTCCCGCGTATGCAGCCGGACTTGTAACCACTGTGCACCTGCTGAc < 1:4372912/150‑1 (MQ=255) ccGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCgg > 1:2182333/1‑122 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg < 1:1390632/150‑1 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg < 1:3847555/150‑1 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg < 1:3724241/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGCTCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCAGTCGCgg < 2:4428522/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGTAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 2:4934662/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 2:4089756/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:6529742/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:4092653/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:3865362/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:2897938/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:3475414/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAAATCACCCGGCCGTGTAACCCCGGGGCACCAGCGGACGCATTAGCgg > 2:4017303/1‑150 (MQ=255) aGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCggg < 2:1956084/150‑1 (MQ=255) tATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCa < 1:3394249/150‑1 (MQ=255) tGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGcgcg > 1:5036623/1‑150 (MQ=255) tCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGGGGGGCCGCGACTGCGCCCCGCCGTGTTACCACAGTGCCCCAGCTGTCGCCTACGCcgggccccc > 1:5523985/1‑144 (MQ=255) cGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGccc < 2:1410099/150‑1 (MQ=255) cGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGccc < 2:6392989/150‑1 (MQ=255) cGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGGGCCCGCGCAAGCCCCCCGCCGTGTAACCACAGTGGACCGGCTGGCGCCATCGCGGGCACGccc > 2:1226051/1‑150 (MQ=255) gCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGc < 2:3293814/150‑1 (MQ=255) gCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAAAGCACCCCGCCGGGTAAACCCAGTGCACCTGCTGACGCAGTAGCGGGCccgcccgc > 2:5997281/1‑150 (MQ=255) cGTCGAACCGCGCCTTTTGGTGCCTATCGAGCAGCGCTTATTAGCTATAGAGTGGCAACCGTTTTCCG‑TTGTGGTAGGGGGCGTGCCCGGTAATGCACCCGGCCTTGTAACCCCTGTGCACCTGCTGACGAATTCGCGGGCACGCCCGCt < 2:898711/150‑1 (MQ=255) aaCAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTTACCACGGTGCACCAGCTGGCGCAGTCGCCGGCCCGCCCCCGCCcac > 1:5033617/1‑150 (MQ=255) accgcgcCTGTTGGTGCCGATCGAGCAGCGCTGAATAGCTATCGAGCGGCAACCGGTTTCCC‑TTGTGGGCGCGGGCGGGCCCGCGACTGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGATTTGGGGGGCACGCCCGCTCCcaca < 2:2136929/147‑1 (MQ=255) aGTTCGTGCCGATCTAGCAGCGCTGAATAGATATAGAGAGGCAACCCGTTTCCC‑TTGAGGTAGGGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGGGGGCACGCCCGCTCCCACAGGTACGGt < 2:6083161/150‑1 (MQ=255) gTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCCCGGTGCACCAGCTGACGCAGTCGCGGGCACGCCCGCTCCCACCGGGACGGTg > 2:1512724/1‑150 (MQ=255) tCGTGCCGTTCGCGCAGCGCTTATTAGATATAGAGCGGCAACCGGTTTCCC‑TTGTGGGTGCGGGCGTGCCCGCTTTTGCACCCGGCCTTGTAACCACTGTGCACCTGGTGACGCTTTCGCGGGCACGCCCGCTCCCACAGGTACGGTGaa < 2:3354871/150‑1 (MQ=255) gTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg > 2:4146958/1‑119 (MQ=255) gTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg > 2:729593/1‑119 (MQ=255) tGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCCCGAATGCACCCCGCCGTGTAAACACAGTGCCCCAGCAGACCCATTCGCGGGCACGCCCGCGCCCACACGTACGGTGAAAcc > 2:115755/1‑150 (MQ=255) cGATCGCGCAGCGATTAATAGCTATAGTGAGCCACCCCGTTTCCG‑TTGGGGGTGGGGGCGGGCCCGCTAATCCCCCGGGCCTTCAAACCACTGCGCCCCTGGTGCCGAATGCGCGCGCCCGCCCGCTCCCACAGGTACGGTGAAACCTTc < 2:1880412/150‑1 (MQ=255) gctggAGCCGGGCTTATTAGCTATAGAGAGGCACCCCGTTTCCC‑TTGCGGGAGCGGGCGTGCCCGCGACTGCACCCGGCCTTTCAACCCCGGTGCCCCGGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTcc < 2:3805509/146‑1 (MQ=255) gATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGGCCCCGAAATCACCCCGCCGTGGAACCACAGTGCACCAGGAGTCGCAATAGCGGGCCCGCCCCCGCCCACAGGTACCGTGAAAccatac > 2:2577283/1‑146 (MQ=255) gATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGGGCCCCCGAAAGCACCCCGCCGTGTAACCACAGTTCACCAGCTGAAGCAAGCGCGGGCCCGCCCCCCCCCACACGGACGGGGGAAccaacc > 2:4264397/1‑146 (MQ=255) agcagcGCTGAATAGCTATAGCGCGGCACCCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGCCCTTTTAACCACTGTGCACCTGCTGACGCTTTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATc < 2:1562651/150‑1 (MQ=255) ccgggcTGAATAGCTATCGAGCGCCACCCCGTTTCCC‑TTGTGGGCGCGGGCGGCCCGGCTAATCCACCGGGCCTGTTAACCAGTGTCCCCCGGCTCACGCATTCGGGGCCCCGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCt < 2:204290/146‑1 (MQ=255) cagcGCTTAATAGATATAGTGCGGAACCCCTTTTCCC‑TTGTGGGTGCGGGCGTGCCCGCGAATGAACCCGGCCTTGTAACCACTGTGCACCTGCTGAGGATTTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCt < 2:2950831/150‑1 (MQ=255) ttgCTATCGCGAGGCAACCCGTTTCCC‑TGGCGGGAGCGGGCGTGCCCGCGAAGGCACCGGGCCTTGCACCCACGGGGCACCGGGTGACGCATTCGCGGGCCCGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGc < 2:4260054/148‑1 (MQ=255) tcgCTATCGTGCGGCACCCGGTTTCCC‑TTGAGGGAGGGGGCGTGCCGGCGAATGCACCGGGCGTTGTAACCCCTGTGCACGTGGTGACGCTTGCGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGc < 2:4663436/148‑1 (MQ=255) ataGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTTTAACCACATTGCACCAGCAGACGCATTCGCGGGCACGCCCGCACCCACAGCTAAGGTGAAAACAAACGAAACAAGTGACCGAGCCTGAt > 2:531796/1‑150 (MQ=255) tcgcgcggCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGAtt < 2:2123521/144‑1 (MQ=255) tgcggCAACCGGTTTCCC‑TTGTGGGTGGGGGGGTGCCGGCGATTGCACCCGGCCTTGTAACCCCTGTGCACCTGCTGCCGCTTTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCa < 2:460356/147‑1 (MQ=255) gcgcgccaCCCCTTTCCCGTGGCGGGCGGGGGCGTGCCCGCGACTGCACCGGGCCTTGTAACCACTGGCCACCTGCTGACGCTTCCGCGGGCCCGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTcc < 2:5804722/143‑1 (MQ=255) agagGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGGAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGTAACCTTACGAATCCTGTGACCGAGCCGGATTCCa > 2:3963937/1‑150 (MQ=255) gcggCACCCGGTTTCCC‑TGGAGGGTGCGGGCGGGCCCGCGATTGCACCCGGCCTTGCAACCACTGTGCCCCGGCTGACGCATCCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat < 1:6791510/148‑1 (MQ=255) ggCACCCGGTTTCCG‑TTGTGGTTGGGGGCGGGCCCGCTAATGCACCCGGCCTTGTAACCCGTGGCCACCGGGTGACGCAGCCGCGGCCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga < 1:6721378/150‑1 (MQ=255) gCACCCCGTGCCCC‑TTGCGGGCGCGGGGGTGCCCGCTAATGCACCCGGCCTTGTACCCACTGTGCACCTGCGGCCGCATGCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatgat < 2:2537377/150‑1 (MQ=255) ttCCC‑TTGTGGGAGCGGGCGTGCCCGCGATTGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGc < 2:2183188/150‑1 (MQ=255) tCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa < 2:5601811/150‑1 (MQ=255) ttGAGGGAGCGGGCGTGCCCCCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCATCCGAATCCTGTGACCGAGCCTGATTCCAAGATGAACACTGCAGAcc > 2:3891896/1‑150 (MQ=255) gggggggTGCGGGGGTGCCCGCGATTGCACCCGGCCTGGTCCCCAGGGTGCACCTGGTGCCGCTTCCGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATAcc < 2:110775/146‑1 (MQ=255) ggttgCGGGCGTGCCCGCGACTGCACCCGGCGTTGTAGCCAGGGTGCACCGGCTGACGCATGCGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCaa < 2:5248667/146‑1 (MQ=255) ttcgCGGGCACGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAg > 1:3190735/4‑150 (MQ=255) ggCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg > 2:2178208/1‑150 (MQ=255) ggCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg > 1:4608547/1‑150 (MQ=255) ggCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCAGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg > 1:5371622/1‑150 (MQ=255) gCGGGCCCGCGACTGCACCCGGCCTGGTAACCCGTGGGCACCTGCTGCCGCTGGCGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGc < 2:3549095/150‑1 (MQ=255) | GGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCC‑TTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCA > NC_002947/2668862‑2669159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |